RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C RPN5Q12250 445 aaKnown RBP3.89□□□□□ -1.79
SSO2YMR183C MDY2Q12285 212 aa3.89□□□□□ -1.79
SSO2YMR183C RRP36Q12481 300 aaPredicted RBP3.89□□□□□ -1.79
SSO2YMR183C YLR111WQ12528 110 aa3.89□□□□□ -1.79
SSO2YMR183C YOR019WQ99248 730 aa3.89□□□□□ -1.79
SSO2YMR183C ISN1Q99312 450 aa3.89□□□□□ -1.79
SSO2YMR183C URE2P23202 354 aaKnown RBP3.88□□□□□ -1.79
SSO2YMR183C YIH1P25637 258 aa3.88□□□□□ -1.79
SSO2YMR183C DAL80P26343 269 aa3.88□□□□□ -1.79
SSO2YMR183C IME2P32581 645 aa3.88□□□□□ -1.79
SSO2YMR183C YEL043WP32618 956 aa3.88□□□□□ -1.79
SSO2YMR183C HEL1P36113 551 aa3.88□□□□□ -1.79
SSO2YMR183C VPS41P38959 992 aa3.88□□□□□ -1.79
SSO2YMR183C BUD16P39988 312 aa3.88□□□□□ -1.79
SSO2YMR183C SGN1P40561 250 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
SSO2YMR183C IME4P41833 600 aa3.88□□□□□ -1.79
SSO2YMR183C MAF1P41910 395 aa3.88□□□□□ -1.79
SSO2YMR183C CAK1P43568 368 aaPredicted RBP3.88□□□□□ -1.79
SSO2YMR183C IDP3P53982 420 aaKnown RBP3.88□□□□□ -1.79
SSO2YMR183C YDR239CQ03780 787 aa3.88□□□□□ -1.79
SSO2YMR183C RAD33Q04231 177 aa3.88□□□□□ -1.79
SSO2YMR183C CRF1Q04930 467 aa3.88□□□□□ -1.79
SSO2YMR183C DON1Q05610 365 aa3.88□□□□□ -1.79
SSO2YMR183C MRD1Q06106 887 aaKnown RBP3.88□□□□□ -1.79
SSO2YMR183C MMR1Q06324 491 aa3.88□□□□□ -1.79
SSO2YMR183C CFT2Q12102 859 aaPredicted RBP3.88□□□□□ -1.79
SSO2YMR183C SWT1Q12104 458 aa3.88□□□□□ -1.79
SSO2YMR183C PRS5Q12265 496 aaKnown RBP3.88□□□□□ -1.79
SSO2YMR183C SPE4Q12455 300 aa3.88□□□□□ -1.79
SSO2YMR183C YPT6Q99260 215 aa3.88□□□□□ -1.79
SSO2YMR183C BI2P03873 423 aa3.87□□□□□ -1.79
SSO2YMR183C GRR1P24814 1151 aa3.87□□□□□ -1.79
SSO2YMR183C SEF1P34228 1148 aa3.87□□□□□ -1.79
SSO2YMR183C DAD2P36162 133 aa3.87□□□□□ -1.79
SSO2YMR183C ERC1P38767 581 aa3.87□□□□□ -1.79
SSO2YMR183C OSW5P40219 148 aa3.87□□□□□ -1.79
SSO2YMR183C LAS21P40367 830 aa3.87□□□□□ -1.79
SSO2YMR183C PKP1P40530 394 aa3.87□□□□□ -1.79
SSO2YMR183C FET5P43561 622 aa3.87□□□□□ -1.79
SSO2YMR183C MPS1P54199 764 aa3.87□□□□□ -1.79
SSO2YMR183C ERV25P54837 211 aaKnown RBP3.87□□□□□ -1.79
SSO2YMR183C RPA49Q01080 415 aaPredicted RBP3.87□□□□□ -1.79
SSO2YMR183C KAP120Q02932 1032 aa3.87□□□□□ -1.79
SSO2YMR183C BUD22Q04347 519 aaKnown RBP3.87□□□□□ -1.79
SSO2YMR183C RQC1Q05468 723 aaKnown RBP3.87□□□□□ -1.79
SSO2YMR183C VPS38Q05919 439 aa3.87□□□□□ -1.79
SSO2YMR183C YLH47Q06493 454 aa3.87□□□□□ -1.79
SSO2YMR183C RTC5Q12108 567 aaKnown RBP3.87□□□□□ -1.79
SSO2YMR183C PSY3Q12318 242 aa3.87□□□□□ -1.79
SSO2YMR183C YML133CQ03099 1374 aa3.87□□□□□ -1.79
SSO2YMR183C YLL067CQ07888 1374 aa3.87□□□□□ -1.79
SSO2YMR183C YLL066CQ99208 1374 aa3.87□□□□□ -1.79
SSO2YMR183C TY1B-DR4Q07793 1604 aa3.86□□□□□ -1.79
SSO2YMR183C YBR085C-AO43137 85 aa3.86□□□□□ -1.79
SSO2YMR183C CHO2P05374 869 aaKnown RBP3.86□□□□□ -1.79
SSO2YMR183C RPL3P14126 387 aaKnown RBP3.86□□□□□ -1.79
SSO2YMR183C RRP43P25359 394 aaPredicted RBP3.86□□□□□ -1.79
SSO2YMR183C URK1P27515 501 aa3.86□□□□□ -1.79
SSO2YMR183C CDC15P27636 974 aa3.86□□□□□ -1.79
SSO2YMR183C NIP1P32497 812 aaKnown RBP3.86□□□□□ -1.79
SSO2YMR183C GDA1P32621 518 aa3.86□□□□□ -1.79
SSO2YMR183C PPQ1P32945 549 aa3.86□□□□□ -1.79
SSO2YMR183C SUR1P33300 382 aa3.86□□□□□ -1.79
SSO2YMR183C LTV1P34078 463 aa3.86□□□□□ -1.79
SSO2YMR183C AGP2P38090 596 aa3.86□□□□□ -1.79
SSO2YMR183C ADH5P38113 351 aaKnown RBP3.86□□□□□ -1.79
SSO2YMR183C RRT2P38332 387 aa3.86□□□□□ -1.79
SSO2YMR183C CCT6P39079 546 aa3.86□□□□□ -1.79
SSO2YMR183C SEC24P40482 926 aaKnown RBP3.86□□□□□ -1.79
SSO2YMR183C NAS2P40555 220 aa3.86□□□□□ -1.79
SSO2YMR183C DLD2P46681 530 aaKnown RBP3.86□□□□□ -1.79
SSO2YMR183C PET130P47065 347 aa3.86□□□□□ -1.79
SSO2YMR183C LYS4P49367 693 aaPredicted RBP3.86□□□□□ -1.79
SSO2YMR183C VID30P53076 958 aa3.86□□□□□ -1.79
SSO2YMR183C MNP1P53163 194 aaPredicted RBP3.86□□□□□ -1.79
SSO2YMR183C YGR111WP53265 400 aa3.86□□□□□ -1.79
SSO2YMR183C PHO92Q06390 306 aa3.86□□□□□ -1.79
SSO2YMR183C CYK3Q07533 885 aa3.86□□□□□ -1.79
SSO2YMR183C PML1Q07930 204 aaPredicted RBP3.86□□□□□ -1.79
SSO2YMR183C DCI1Q08558 271 aa3.86□□□□□ -1.79
SSO2YMR183C GEP3Q08622 556 aa3.86□□□□□ -1.79
SSO2YMR183C HER1Q12276 1246 aa3.86□□□□□ -1.79
SSO2YMR183C SEC39Q12745 709 aa3.86□□□□□ -1.79
SSO2YMR183C GAL80P04387 435 aa3.85□□□□□ -1.79
SSO2YMR183C EST1P17214 699 aaPredicted RBP3.85□□□□□ -1.79
SSO2YMR183C LRE1P25579 583 aaKnown RBP3.85□□□□□ -1.79
SSO2YMR183C SYN8P31377 255 aa3.85□□□□□ -1.79
SSO2YMR183C SRB5P32585 307 aa3.85□□□□□ -1.79
SSO2YMR183C PMT1P33775 817 aa3.85□□□□□ -1.79
SSO2YMR183C CMC1P36064 111 aa3.85□□□□□ -1.79
SSO2YMR183C PCH2P38126 564 aa3.85□□□□□ -1.79
SSO2YMR183C YSW1P38280 609 aa3.85□□□□□ -1.79
SSO2YMR183C YHR131CP38835 850 aa3.85□□□□□ -1.79
SSO2YMR183C WSS1P38838 269 aa3.85□□□□□ -1.79
SSO2YMR183C AIP1P46680 615 aaKnown RBP3.85□□□□□ -1.79
SSO2YMR183C CTK2P46962 323 aa3.85□□□□□ -1.79
SSO2YMR183C ALT2P52892 507 aa3.85□□□□□ -1.79
SSO2YMR183C SCS3P53012 380 aa3.85□□□□□ -1.79
SSO2YMR183C YGL036WP53185 909 aaPredicted RBP3.85□□□□□ -1.79
SSO2YMR183C PDR16P53860 351 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms