RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C GAC1P28006 793 aa2.18□□□□□ -2.06
SGD1YLR336C MGM1P32266 881 aa2.18□□□□□ -2.06
SGD1YLR336C DBP8P38719 431 aa2.18□□□□□ -2.06
SGD1YLR336C PCI8P40512 444 aa2.18□□□□□ -2.06
SGD1YLR336C IPI3P53877 555 aa2.18□□□□□ -2.06
SGD1YLR336C EKI1Q03764 534 aa2.18□□□□□ -2.06
SGD1YLR336C UTP21Q06078 939 aaPredicted RBP2.18□□□□□ -2.06
SGD1YLR336C MCP2Q06567 569 aa2.18□□□□□ -2.06
SGD1YLR336C TSR2Q06672 205 aaKnown RBP2.18□□□□□ -2.06
SGD1YLR336C ECM30Q06673 1274 aa2.18□□□□□ -2.06
SGD1YLR336C FMP40Q08968 688 aaPredicted RBP2.18□□□□□ -2.06
SGD1YLR336C TAH18Q12181 623 aa2.18□□□□□ -2.06
SGD1YLR336C MET17P06106 444 aa2.17□□□□□ -2.06
SGD1YLR336C CDC31P06704 161 aaKnown RBP2.17□□□□□ -2.06
SGD1YLR336C RPB8P20436 146 aa2.17□□□□□ -2.06
SGD1YLR336C SGV1P23293 657 aaKnown RBP2.17□□□□□ -2.06
SGD1YLR336C MTR2P34232 184 aaKnown RBP2.17□□□□□ -2.06
SGD1YLR336C ASK1P35734 292 aa2.17□□□□□ -2.06
SGD1YLR336C STV1P37296 890 aa2.17□□□□□ -2.06
SGD1YLR336C REG2P38232 338 aa2.17□□□□□ -2.06
SGD1YLR336C DOT5P40553 215 aa2.17□□□□□ -2.06
SGD1YLR336C MDV1P47025 714 aa2.17□□□□□ -2.06
SGD1YLR336C IMD4P50094 524 aaKnown RBP2.17□□□□□ -2.06
SGD1YLR336C NUP100Q02629 959 aa2.17□□□□□ -2.06
SGD1YLR336C TAF11Q04226 346 aa2.17□□□□□ -2.06
SGD1YLR336C MRPL1Q04599 285 aa2.17□□□□□ -2.06
SGD1YLR336C AFT2Q08957 416 aa2.17□□□□□ -2.06
SGD1YLR336C RLM1Q12224 676 aa2.17□□□□□ -2.06
SGD1YLR336C RGT2Q12300 763 aa2.17□□□□□ -2.06
SGD1YLR336C YJR112W-AQ3E743 109 aa2.17□□□□□ -2.06
SGD1YLR336C ARG81P05085 880 aa2.17□□□□□ -2.06
SGD1YLR336C YFL068WP0CX99 160 aa2.17□□□□□ -2.06
SGD1YLR336C YLL066W-AP0CY00 160 aa2.17□□□□□ -2.06
SGD1YLR336C YLL067W-AP0CY01 160 aa2.17□□□□□ -2.06
SGD1YLR336C ELO2P25358 347 aa2.17□□□□□ -2.06
SGD1YLR336C PDR3P33200 976 aa2.17□□□□□ -2.06
SGD1YLR336C YKL100CP34248 587 aa2.17□□□□□ -2.06
SGD1YLR336C TCD2P36101 447 aaKnown RBP2.17□□□□□ -2.06
SGD1YLR336C PHO90P39535 881 aa2.17□□□□□ -2.06
SGD1YLR336C YIR016WP40572 265 aa2.17□□□□□ -2.06
SGD1YLR336C PTR3P43606 678 aa2.17□□□□□ -2.06
SGD1YLR336C RPT6Q01939 405 aaKnown RBP2.17□□□□□ -2.06
SGD1YLR336C COQ9Q05779 260 aa2.17□□□□□ -2.06
SGD1YLR336C VPS38Q05919 439 aa2.17□□□□□ -2.06
SGD1YLR336C NCE102Q12207 173 aaRIP-Chip data2.17□□□□□ -2.06not detected
SGD1YLR336C GAL80P04387 435 aa2.16□□□□□ -2.06
SGD1YLR336C RPS2P25443 254 aaKnown RBP2.16□□□□□ -2.06
SGD1YLR336C WBP1P33767 430 aaKnown RBP2.16□□□□□ -2.06
SGD1YLR336C ICS2P38284 255 aa2.16□□□□□ -2.06
SGD1YLR336C MET28P40573 187 aa2.16□□□□□ -2.06
SGD1YLR336C FAR3P46671 204 aa2.16□□□□□ -2.06
SGD1YLR336C YNL234WP53857 426 aa2.16□□□□□ -2.06
SGD1YLR336C MRPL19P53875 158 aa2.16□□□□□ -2.06
SGD1YLR336C CTL1Q03220 320 aaKnown RBP2.16□□□□□ -2.06
SGD1YLR336C ART10P18634 518 aaKnown RBP2.16□□□□□ -2.06
SGD1YLR336C BUD5P25300 642 aaPredicted RBP2.16□□□□□ -2.06
SGD1YLR336C BOS1P25385 244 aa2.16□□□□□ -2.06
SGD1YLR336C RPL32P38061 130 aaKnown RBP2.16□□□□□ -2.06
SGD1YLR336C PCL6P40038 420 aa2.16□□□□□ -2.06
SGD1YLR336C YIL152WP40455 235 aa2.16□□□□□ -2.06
SGD1YLR336C FET5P43561 622 aa2.16□□□□□ -2.06
SGD1YLR336C DRN1P53255 507 aaKnown RBP2.16□□□□□ -2.06
SGD1YLR336C YGR127WP53275 312 aa2.16□□□□□ -2.06
SGD1YLR336C SOL4P53315 255 aa2.16□□□□□ -2.06
SGD1YLR336C SMA1Q02651 245 aa2.16□□□□□ -2.06
SGD1YLR336C YMR034CQ05131 434 aaPredicted RBP2.16□□□□□ -2.06
SGD1YLR336C MLH2Q07980 695 aa2.16□□□□□ -2.06
SGD1YLR336C PDA1P16387 420 aaKnown RBP2.15□□□□□ -2.06
SGD1YLR336C SEF1P34228 1148 aa2.15□□□□□ -2.06
SGD1YLR336C ROT2P38138 954 aa2.15□□□□□ -2.06
SGD1YLR336C ALG5P40350 334 aa2.15□□□□□ -2.06
SGD1YLR336C VID30P53076 958 aa2.15□□□□□ -2.06
SGD1YLR336C DIG1Q03063 452 aaKnown RBP2.15□□□□□ -2.06
SGD1YLR336C RDR1Q08904 546 aa2.15□□□□□ -2.06
SGD1YLR336C APL5Q08951 932 aaKnown RBP2.15□□□□□ -2.06
SGD1YLR336C BSC1Q12140 328 aa2.15□□□□□ -2.06
SGD1YLR336C UBX3Q12229 455 aa2.15□□□□□ -2.06
SGD1YLR336C PGA3Q12746 312 aaKnown RBP2.15□□□□□ -2.06
SGD1YLR336C CKA1P15790 372 aa2.15□□□□□ -2.07
SGD1YLR336C ROX1P25042 368 aa2.15□□□□□ -2.07
SGD1YLR336C OCA4P25366 362 aa2.15□□□□□ -2.07
SGD1YLR336C MGR1P25573 417 aa2.15□□□□□ -2.07
SGD1YLR336C YPK3P38070 525 aa2.15□□□□□ -2.07
SGD1YLR336C EFM2P38347 419 aa2.15□□□□□ -2.07
SGD1YLR336C SPC97P38863 823 aa2.15□□□□□ -2.07
SGD1YLR336C RTS2P40962 232 aa2.15□□□□□ -2.07
SGD1YLR336C YGR066CP53242 292 aa2.15□□□□□ -2.07
SGD1YLR336C BUD32P53323 261 aa2.15□□□□□ -2.07
SGD1YLR336C ECI1Q05871 280 aa2.15□□□□□ -2.07
SGD1YLR336C YDL057WQ07379 328 aa2.15□□□□□ -2.07
SGD1YLR336C ETT1Q08421 412 aaKnown RBP2.15□□□□□ -2.07
SGD1YLR336C AVL9Q12500 764 aa2.15□□□□□ -2.07
SGD1YLR336C FOB1O13329 566 aa2.14□□□□□ -2.07
SGD1YLR336C DFR1P07807 211 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
SGD1YLR336C ATO2P32907 282 aa2.14□□□□□ -2.07
SGD1YLR336C ARF3P40994 183 aaRIP-Chip data2.14□□□□□ -2.07not detected
SGD1YLR336C PET130P47065 347 aa2.14□□□□□ -2.07
SGD1YLR336C BOP3P53958 396 aa2.14□□□□□ -2.07
SGD1YLR336C BET4Q00618 327 aa2.14□□□□□ -2.07
SGD1YLR336C YPL014WQ02606 381 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms