RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	YRM1	Q12340	786 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	YLR278C	Q05854	1341 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	IPP1	P00817	287 aa	Known RBP	5.7	□□□□□ -1.5
DBP9	YLR276C	CBP3	P21560	335 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	SRO9	P25567	434 aa	Known RBP	5.7	□□□□□ -1.5
DBP9	YLR276C	MEI4	P29467	408 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	CRM1	P30822	1084 aa	Known RBP	5.7	□□□□□ -1.5
DBP9	YLR276C	UBP11	P36026	717 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	YKR075C	P36155	307 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	SLX1	P38324	304 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	DIA4	P38705	446 aa	Predicted RBP	5.7	□□□□□ -1.5
DBP9	YLR276C	MTG2	P38860	518 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	TPA1	P40032	644 aa	Known RBP	5.7	□□□□□ -1.5
DBP9	YLR276C	STB4	P50104	949 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	TAF6	P53040	516 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	VAC7	P53950	1165 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	TIM10	P87108	93 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	SLT2	Q00772	484 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	SED5	Q01590	340 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	DAS2	Q12084	232 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	YPT6	Q99260	215 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	PHO5	P00635	467 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	ERG11	P10614	530 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	DBF2	P22204	572 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	IMG2	P25642	146 aa	Predicted RBP	5.7	□□□□□ -1.5
DBP9	YLR276C	RPS5	P26783	225 aa	Known RBP	5.7	□□□□□ -1.5
DBP9	YLR276C	RPC25	P35718	212 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	MYO3	P36006	1272 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	UTP30	P36144	274 aa	Known RBP	5.7	□□□□□ -1.5
DBP9	YLR276C	YBR138C	P38277	524 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	APE4	P38821	490 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	SSP120	P39931	234 aa	Known RBP	5.7	□□□□□ -1.5
DBP9	YLR276C	YER137C	P40083	148 aa	Known RBP	5.7	□□□□□ -1.5
DBP9	YLR276C	MNT2	P53059	558 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	RMR1	P53060	241 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	ASI2	P53895	289 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	INA17	Q02888	182 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	RPN9	Q04062	393 aa	Known RBP	5.7	□□□□□ -1.5
DBP9	YLR276C	STP4	Q07351	490 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	DIS3	Q08162	1001 aa	Known RBP	5.7	□□□□□ -1.5
DBP9	YLR276C	SPE3	Q12074	293 aa	Known RBP	5.7	□□□□□ -1.5
DBP9	YLR276C	YPR022C	Q12139	1133 aa		5.7	□□□□□ -1.5
DBP9	YLR276C	SNU23	Q12368	194 aa	Predicted RBP	5.7	□□□□□ -1.5
DBP9	YLR276C	MF(ALPHA)1	P01149	165 aa		5.69	□□□□□ -1.5
DBP9	YLR276C	RPL6B	P05739	176 aa	Known RBP	5.69	□□□□□ -1.5
DBP9	YLR276C	KIN3	P22209	435 aa		5.69	□□□□□ -1.5
DBP9	YLR276C	DGR2	P32330	852 aa		5.69	□□□□□ -1.5
DBP9	YLR276C	SRP101	P32916	621 aa		5.69	□□□□□ -1.5
DBP9	YLR276C	TEF4	P36008	412 aa	Known RBP	5.69	□□□□□ -1.5
DBP9	YLR276C	STB6	P36085	766 aa		5.69	□□□□□ -1.5
DBP9	YLR276C	NTR2	P36118	322 aa	Predicted RBP	5.69	□□□□□ -1.5
DBP9	YLR276C	TDP1	P38319	544 aa		5.69	□□□□□ -1.5
DBP9	YLR276C	RRF1	P38771	230 aa		5.69	□□□□□ -1.5
DBP9	YLR276C	EDC3	P39998	551 aa	Known RBP	5.69	□□□□□ -1.5
DBP9	YLR276C	DIM1	P41819	318 aa	Known RBP	5.69	□□□□□ -1.5
DBP9	YLR276C	ELP2	P42935	788 aa		5.69	□□□□□ -1.5
DBP9	YLR276C	BIR1	P47134	954 aa		5.69	□□□□□ -1.5
DBP9	YLR276C	MLC1	P53141	149 aa		5.69	□□□□□ -1.5
DBP9	YLR276C	MRPL19	P53875	158 aa		5.69	□□□□□ -1.5
DBP9	YLR276C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
DBP9	YLR276C	VPS54	Q12071	889 aa		5.69	□□□□□ -1.5
DBP9	YLR276C	ZRT2	Q12436	422 aa		5.69	□□□□□ -1.5
DBP9	YLR276C	YBR298C-A	Q8TGK4	73 aa		5.69	□□□□□ -1.5
DBP9	YLR276C	AI5_ALPHA	Q9ZZX1	630 aa		5.69	□□□□□ -1.5
DBP9	YLR276C	RPN13	O13563	156 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	URA3	P03962	267 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	TUB1	P09733	447 aa	Known RBP	5.68	□□□□□ -1.5
DBP9	YLR276C	SIR1	P21691	654 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	TRK2	P28584	889 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	RPT3	P33298	428 aa	Known RBP	5.68	□□□□□ -1.5
DBP9	YLR276C	MDL2	P33311	773 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	LRG1	P35688	1017 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	YBR139W	P38109	508 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	KAP104	P38217	918 aa	Known RBP	5.68	□□□□□ -1.5
DBP9	YLR276C	RFS1	P38234	210 aa	Known RBP	5.68	□□□□□ -1.5
DBP9	YLR276C	YIL108W	P40483	696 aa	Known RBP	5.68	□□□□□ -1.5
DBP9	YLR276C	YIL077C	P40508	320 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	PCI8	P40512	444 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	VMA10	P48836	114 aa	Known RBP	5.68	□□□□□ -1.5
DBP9	YLR276C	YGL108C	P53139	140 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	YNR071C	P53757	342 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	CBK1	P53894	756 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	YPL034W	Q03083	165 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	YMR210W	Q03649	449 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	FMN1	Q03778	218 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	DLT1	Q04216	342 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	URC2	Q04411	772 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	YOL075C	Q08234	1294 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	HUA2	Q12134	243 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	TAH18	Q12181	623 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	NCB2	Q92317	146 aa		5.68	□□□□□ -1.5
DBP9	YLR276C	HSH49	Q99181	213 aa	Predicted RBP	5.68	□□□□□ -1.5
DBP9	YLR276C	FUM1	P08417	488 aa	Known RBP	5.67	□□□□□ -1.5
DBP9	YLR276C	RAP1	P11938	827 aa		5.67	□□□□□ -1.5
DBP9	YLR276C	MRP13	P12686	339 aa		5.67	□□□□□ -1.5
DBP9	YLR276C	KRE2	P27809	442 aa		5.67	□□□□□ -1.5
DBP9	YLR276C	SET3	P36124	751 aa		5.67	□□□□□ -1.5
DBP9	YLR276C	ABZ1	P37254	787 aa	Predicted RBP	5.67	□□□□□ -1.5
DBP9	YLR276C	ETR1	P38071	380 aa		5.67	□□□□□ -1.5
DBP9	YLR276C	PDX3	P38075	228 aa	Known RBP	5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms