RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	ECM30	Q06673	1274 aa		5.66	□□□□□ -1.5
RSA3	YLR221C	RTT109	Q07794	436 aa		5.66	□□□□□ -1.5
RSA3	YLR221C	CDC45	Q08032	650 aa		5.66	□□□□□ -1.5
RSA3	YLR221C	FRE3	Q08905	711 aa		5.66	□□□□□ -1.5
RSA3	YLR221C	RLM1	Q12224	676 aa		5.66	□□□□□ -1.5
RSA3	YLR221C	RRI1	Q12468	440 aa		5.66	□□□□□ -1.5
RSA3	YLR221C	CNA1	P23287	553 aa		5.65	□□□□□ -1.5
RSA3	YLR221C	CLB3	P24870	427 aa		5.65	□□□□□ -1.5
RSA3	YLR221C	GPI10	P30777	616 aa		5.65	□□□□□ -1.5
RSA3	YLR221C	MRE11	P32829	692 aa		5.65	□□□□□ -1.5
RSA3	YLR221C	WBP1	P33767	430 aa	Known RBP	5.65	□□□□□ -1.5
RSA3	YLR221C	YKL100C	P34248	587 aa		5.65	□□□□□ -1.5
RSA3	YLR221C	RFC1	P38630	861 aa	Known RBP	5.65	□□□□□ -1.5
RSA3	YLR221C	OTU2	P38747	307 aa	Known RBP	5.65	□□□□□ -1.5
RSA3	YLR221C	AXL1	P40851	1208 aa		5.65	□□□□□ -1.5
RSA3	YLR221C	GPD2	P41911	440 aa	Known RBP	5.65	□□□□□ -1.5
RSA3	YLR221C	LYS20	P48570	428 aa	Known RBP	5.65	□□□□□ -1.5
RSA3	YLR221C	HOS2	P53096	452 aa	Predicted RBP	5.65	□□□□□ -1.5
RSA3	YLR221C	YNL144C	P53907	740 aa		5.65	□□□□□ -1.5
RSA3	YLR221C	THI7	Q05998	598 aa		5.65	□□□□□ -1.5
RSA3	YLR221C	MRD1	Q06106	887 aa	Known RBP	5.65	□□□□□ -1.5
RSA3	YLR221C	YMR085W	P0CF18	432 aa		5.64	□□□□□ -1.51
RSA3	YLR221C	MRP13	P12686	339 aa		5.64	□□□□□ -1.51
RSA3	YLR221C	PRD1	P25375	712 aa		5.64	□□□□□ -1.51
RSA3	YLR221C	CMC1	P36064	111 aa		5.64	□□□□□ -1.51
RSA3	YLR221C	TOM71	P38825	639 aa	Known RBP	5.64	□□□□□ -1.51
RSA3	YLR221C	ANS1	P38832	159 aa		5.64	□□□□□ -1.51
RSA3	YLR221C	VPS41	P38959	992 aa		5.64	□□□□□ -1.51
RSA3	YLR221C	CIN4	P39110	191 aa		5.64	□□□□□ -1.51
RSA3	YLR221C	LSM5	P40089	93 aa	Known RBP	5.64	□□□□□ -1.51
RSA3	YLR221C	COP1	P53622	1201 aa	Known RBP	5.64	□□□□□ -1.51
RSA3	YLR221C	RQC1	Q05468	723 aa	Known RBP	5.64	□□□□□ -1.51
RSA3	YLR221C	ATG26	Q06321	1198 aa		5.64	□□□□□ -1.51
RSA3	YLR221C	AFT2	Q08957	416 aa		5.64	□□□□□ -1.51
RSA3	YLR221C	SEC39	Q12745	709 aa		5.64	□□□□□ -1.51
RSA3	YLR221C	PUT2	P07275	575 aa		5.63	□□□□□ -1.51
RSA3	YLR221C	PDX1	P16451	410 aa		5.63	□□□□□ -1.51
RSA3	YLR221C	SUI2	P20459	304 aa	Known RBP	5.63	□□□□□ -1.51
RSA3	YLR221C	STV1	P37296	890 aa		5.63	□□□□□ -1.51
RSA3	YLR221C	RPL32	P38061	130 aa	Known RBP	5.63	□□□□□ -1.51
RSA3	YLR221C	CFD1	P40558	293 aa		5.63	□□□□□ -1.51
RSA3	YLR221C	ARP10	Q04549	284 aa		5.63	□□□□□ -1.51
RSA3	YLR221C	MCP2	Q06567	569 aa		5.63	□□□□□ -1.51
RSA3	YLR221C	RPB8	P20436	146 aa		5.62	□□□□□ -1.51
RSA3	YLR221C	RPC53	P25441	422 aa		5.62	□□□□□ -1.51
RSA3	YLR221C	DBF4	P32325	704 aa		5.62	□□□□□ -1.51
RSA3	YLR221C	YME1	P32795	747 aa		5.62	□□□□□ -1.51
RSA3	YLR221C	PXA2	P34230	853 aa		5.62	□□□□□ -1.51
RSA3	YLR221C	ULP2	P40537	1034 aa	Predicted RBP	5.62	□□□□□ -1.51
RSA3	YLR221C	VPS25	P47142	202 aa		5.62	□□□□□ -1.51
RSA3	YLR221C	RSM23	Q01163	450 aa		5.62	□□□□□ -1.51
RSA3	YLR221C	CAC2	Q04199	468 aa		5.62	□□□□□ -1.51
RSA3	YLR221C	ECM22	Q05958	814 aa	Predicted RBP	5.62	□□□□□ -1.51
RSA3	YLR221C	RPS10A	Q08745	105 aa	Predicted RBP	5.62	□□□□□ -1.51
RSA3	YLR221C	CRC1	Q12289	327 aa		5.62	□□□□□ -1.51
RSA3	YLR221C	GAL4	P04386	881 aa		5.61	□□□□□ -1.51
RSA3	YLR221C	SEC66	P33754	206 aa		5.61	□□□□□ -1.51
RSA3	YLR221C	MSR1	P38714	643 aa		5.61	□□□□□ -1.51
RSA3	YLR221C	RIM13	Q03792	727 aa		5.61	□□□□□ -1.51
RSA3	YLR221C	ADE13	Q05911	482 aa	Known RBP	5.61	□□□□□ -1.51
RSA3	YLR221C	POS5	Q06892	414 aa		5.61	□□□□□ -1.51
RSA3	YLR221C	YAP1	P19880	650 aa	Known RBP	5.6	□□□□□ -1.51
RSA3	YLR221C	UBA4	P38820	440 aa		5.6	□□□□□ -1.51
RSA3	YLR221C	VRG4	P40107	337 aa		5.6	□□□□□ -1.51
RSA3	YLR221C	LTP1	P40347	161 aa		5.6	□□□□□ -1.51
RSA3	YLR221C	YIL024C	P40543	189 aa		5.6	□□□□□ -1.51
RSA3	YLR221C	HXT14	P42833	540 aa		5.6	□□□□□ -1.51
RSA3	YLR221C	RPS10B	P46784	105 aa	Known RBP	5.6	□□□□□ -1.51
RSA3	YLR221C	SGF73	P53165	657 aa		5.6	□□□□□ -1.51
RSA3	YLR221C	YGR250C	P53316	781 aa	Known RBP	5.6	□□□□□ -1.51
RSA3	YLR221C	REC107	P21651	314 aa		5.59	□□□□□ -1.51
RSA3	YLR221C	PAP1	P29468	568 aa	Known RBP	5.59	□□□□□ -1.51
RSA3	YLR221C	VMA8	P32610	256 aa	Known RBP	5.59	□□□□□ -1.51
RSA3	YLR221C	PMT1	P33775	817 aa		5.59	□□□□□ -1.51
RSA3	YLR221C	ARP1	P38696	384 aa		5.59	□□□□□ -1.51
RSA3	YLR221C	PSA1	P41940	361 aa	Known RBP	5.59	□□□□□ -1.51
RSA3	YLR221C	STB2	P46679	850 aa		5.59	□□□□□ -1.51
RSA3	YLR221C	YPT11	P48559	417 aa		5.59	□□□□□ -1.51
RSA3	YLR221C	YGR126W	P53274	230 aa		5.59	□□□□□ -1.51
RSA3	YLR221C	MSC1	Q03104	513 aa		5.59	□□□□□ -1.51
RSA3	YLR221C	CTL1	Q03220	320 aa	Known RBP	5.59	□□□□□ -1.51
RSA3	YLR221C	RPC11	Q04307	110 aa	Predicted RBP	5.59	□□□□□ -1.51
RSA3	YLR221C	YML133C	Q03099	1374 aa		5.58	□□□□□ -1.52
RSA3	YLR221C	YLL067C	Q07888	1374 aa		5.58	□□□□□ -1.52
RSA3	YLR221C	YLL066C	Q99208	1374 aa		5.58	□□□□□ -1.52
RSA3	YLR221C	SNF3	P10870	884 aa		5.58	□□□□□ -1.52
RSA3	YLR221C	CLC1	P17891	233 aa		5.58	□□□□□ -1.52
RSA3	YLR221C	MTR2	P34232	184 aa	Known RBP	5.58	□□□□□ -1.52
RSA3	YLR221C	SCO2	P38072	301 aa		5.58	□□□□□ -1.52
RSA3	YLR221C	SRP72	P38688	640 aa	Known RBP	5.58	□□□□□ -1.52
RSA3	YLR221C	SSU1	P41930	458 aa		5.58	□□□□□ -1.52
RSA3	YLR221C	ALK1	P43633	760 aa	Known RBP	5.58	□□□□□ -1.52
RSA3	YLR221C	PYK2	P52489	506 aa	Known RBP	5.58	□□□□□ -1.52
RSA3	YLR221C	TOF2	Q02208	771 aa		5.58	□□□□□ -1.52
RSA3	YLR221C	PDS5	Q04264	1277 aa		5.58	□□□□□ -1.52
RSA3	YLR221C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.58	□□□□□ -1.52	not detected
RSA3	YLR221C	YDL007C-A	Q2V2Q0	85 aa		5.58	□□□□□ -1.52
RSA3	YLR221C	YOL159C-A	Q3E769	90 aa		5.58	□□□□□ -1.52
RSA3	YLR221C	SAS3	P34218	831 aa		5.57	□□□□□ -1.52
RSA3	YLR221C	PEX5	P35056	612 aa		5.57	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms