RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W YHR214WP0CX19 203 aa9.84□□□□□ -0.83
SHH4YLR164W VPS34P22543 875 aa9.84□□□□□ -0.83
SHH4YLR164W YSR3P23501 404 aa9.84□□□□□ -0.83
SHH4YLR164W SIS1P25294 352 aaKnown RBP9.84□□□□□ -0.83
SHH4YLR164W ATP11P32453 318 aa9.84□□□□□ -0.83
SHH4YLR164W SDH3P33421 198 aa9.84□□□□□ -0.83
SHH4YLR164W SSN3P39073 555 aa9.84□□□□□ -0.83
SHH4YLR164W SNO2P53823 222 aa9.84□□□□□ -0.83
SHH4YLR164W YNL035CP53962 389 aaKnown RBP9.84□□□□□ -0.83
SHH4YLR164W ARX1Q03862 593 aaKnown RBP9.84□□□□□ -0.83
SHH4YLR164W EMI1Q04406 187 aa9.84□□□□□ -0.83
SHH4YLR164W SPC24Q04477 213 aa9.84□□□□□ -0.83
SHH4YLR164W SAM4Q08985 325 aaKnown RBP9.84□□□□□ -0.83
SHH4YLR164W NAG1Q8TGN9 163 aa9.84□□□□□ -0.83
SHH4YLR164W CAR1P00812 333 aaKnown RBP9.83□□□□□ -0.84
SHH4YLR164W TRP3P00937 484 aa9.83□□□□□ -0.84
SHH4YLR164W CPA1P07258 411 aaKnown RBP9.83□□□□□ -0.84
SHH4YLR164W BUB2P26448 306 aaPredicted RBP9.83□□□□□ -0.84
SHH4YLR164W CIN8P27895 1000 aa9.83□□□□□ -0.84
SHH4YLR164W SPR1P32603 445 aa9.83□□□□□ -0.84
SHH4YLR164W TSC10P38342 320 aa9.83□□□□□ -0.84
SHH4YLR164W YHL008CP38750 627 aa9.83□□□□□ -0.84
SHH4YLR164W LSM5P40089 93 aaKnown RBP9.83□□□□□ -0.84
SHH4YLR164W UTP18P40362 594 aaPredicted RBP9.83□□□□□ -0.84
SHH4YLR164W SEC27P41811 889 aaKnown RBP9.83□□□□□ -0.84
SHH4YLR164W NNF2P53253 936 aa9.83□□□□□ -0.84
SHH4YLR164W SHY1P53266 389 aa9.83□□□□□ -0.84
SHH4YLR164W CUS2P53830 285 aaPredicted RBP9.83□□□□□ -0.84
SHH4YLR164W GTR1Q00582 310 aa9.83□□□□□ -0.84
SHH4YLR164W YML131WQ03102 365 aa9.83□□□□□ -0.84
SHH4YLR164W TRM8Q12009 286 aa9.83□□□□□ -0.84
SHH4YLR164W YOR012WQ12351 137 aa9.83□□□□□ -0.84
SHH4YLR164W GTT2Q12390 233 aa9.83□□□□□ -0.84
SHH4YLR164W SPT3P06844 337 aa9.82□□□□□ -0.84
SHH4YLR164W TUB1P09733 447 aaKnown RBP9.82□□□□□ -0.84
SHH4YLR164W PRP6P19735 899 aaPredicted RBP9.82□□□□□ -0.84
SHH4YLR164W TOA1P32773 286 aa9.82□□□□□ -0.84
SHH4YLR164W PIK1P39104 1066 aa9.82□□□□□ -0.84
SHH4YLR164W NPT1P39683 429 aaKnown RBP9.82□□□□□ -0.84
SHH4YLR164W MET18P40469 1032 aa9.82□□□□□ -0.84
SHH4YLR164W PTR3P43606 678 aa9.82□□□□□ -0.84
SHH4YLR164W YPT32P51996 222 aaKnown RBP9.82□□□□□ -0.84
SHH4YLR164W GTR2P53290 341 aa9.82□□□□□ -0.84
SHH4YLR164W YNL010WP53981 241 aaKnown RBP9.82□□□□□ -0.84
SHH4YLR164W HEL2Q05580 639 aaKnown RBP9.82□□□□□ -0.84
SHH4YLR164W RAD34Q06665 692 aa9.82□□□□□ -0.84
SHH4YLR164W YPR202WQ08993 238 aa9.82□□□□□ -0.84
SHH4YLR164W SLF1Q12034 447 aaKnown RBP9.82□□□□□ -0.84
SHH4YLR164W YLR049CQ12110 428 aa9.82□□□□□ -0.84
SHH4YLR164W SWI5P08153 709 aa9.81□□□□□ -0.84
SHH4YLR164W YCK2P23292 546 aaKnown RBP9.81□□□□□ -0.84
SHH4YLR164W DGR2P32330 852 aa9.81□□□□□ -0.84
SHH4YLR164W YBL029WP38201 376 aa9.81□□□□□ -0.84
SHH4YLR164W HXT5P38695 592 aa9.81□□□□□ -0.84
SHH4YLR164W PPX1P38698 397 aa9.81□□□□□ -0.84
SHH4YLR164W WSC4P38739 605 aa9.81□□□□□ -0.84
SHH4YLR164W UBA4P38820 440 aa9.81□□□□□ -0.84
SHH4YLR164W SCS2P40075 244 aaKnown RBP9.81□□□□□ -0.84
SHH4YLR164W FKH2P41813 862 aa9.81□□□□□ -0.84
SHH4YLR164W NUP84P52891 726 aa9.81□□□□□ -0.84
SHH4YLR164W NOP19P53317 196 aaPredicted RBP9.81□□□□□ -0.84
SHH4YLR164W OPI10Q08202 246 aa9.81□□□□□ -0.84
SHH4YLR164W COS2P0CX12 379 aa9.8□□□□□ -0.84
SHH4YLR164W COS3P0CX13 379 aa9.8□□□□□ -0.84
SHH4YLR164W MET8P15807 274 aa9.8□□□□□ -0.84
SHH4YLR164W MEF1P25039 761 aa9.8□□□□□ -0.84
SHH4YLR164W TCD2P36101 447 aaKnown RBP9.8□□□□□ -0.84
SHH4YLR164W UTP9P38882 575 aaKnown RBP9.8□□□□□ -0.84
SHH4YLR164W YEL073CP39974 107 aa9.8□□□□□ -0.84
SHH4YLR164W COS4P43542 379 aa9.8□□□□□ -0.84
SHH4YLR164W YGL108CP53139 140 aa9.8□□□□□ -0.84
SHH4YLR164W LGE1Q02796 332 aaKnown RBP9.8□□□□□ -0.84
SHH4YLR164W YMR111CQ04461 462 aaPredicted RBP9.8□□□□□ -0.84
SHH4YLR164W HPF1Q05164 967 aa9.8□□□□□ -0.84
SHH4YLR164W AHA1Q12449 350 aaKnown RBP9.8□□□□□ -0.84
SHH4YLR164W YKR104WP0CE69 306 aa9.79□□□□□ -0.84
SHH4YLR164W CLN2P20438 545 aa9.79□□□□□ -0.84
SHH4YLR164W CHL1P22516 861 aaPredicted RBP9.79□□□□□ -0.84
SHH4YLR164W PHO84P25297 587 aaKnown RBP9.79□□□□□ -0.84
SHH4YLR164W STE14P32584 239 aa9.79□□□□□ -0.84
SHH4YLR164W SLX5P32828 619 aaKnown RBP9.79□□□□□ -0.84
SHH4YLR164W CUE2P36075 443 aaKnown RBP9.79□□□□□ -0.84
SHH4YLR164W TRM5P38793 499 aa9.79□□□□□ -0.84
SHH4YLR164W GIP4P39732 760 aa9.79□□□□□ -0.84
SHH4YLR164W FRT2P39734 528 aa9.79□□□□□ -0.84
SHH4YLR164W MEP1P40260 492 aa9.79□□□□□ -0.84
SHH4YLR164W YFR020WP43600 232 aa9.79□□□□□ -0.84
SHH4YLR164W YGL176CP46945 554 aa9.79□□□□□ -0.84
SHH4YLR164W TY4A-JP47023 414 aa9.79□□□□□ -0.84
SHH4YLR164W NNF1P47149 201 aa9.79□□□□□ -0.84
SHH4YLR164W YNR014WP53719 212 aa9.79□□□□□ -0.84
SHH4YLR164W ROT1Q03691 256 aa9.79□□□□□ -0.84
SHH4YLR164W ARG7Q04728 441 aa9.79□□□□□ -0.84
SHH4YLR164W CDA1Q06702 301 aa9.79□□□□□ -0.84
SHH4YLR164W YVC1Q12324 675 aa9.79□□□□□ -0.84
SHH4YLR164W SEM1O94742 89 aa9.78□□□□□ -0.84
SHH4YLR164W PWP1P21304 576 aaKnown RBP9.78□□□□□ -0.84
SHH4YLR164W DBR1P24309 405 aaKnown RBP9.78□□□□□ -0.84
SHH4YLR164W CCR4P31384 837 aaKnown RBP9.78□□□□□ -0.84
SHH4YLR164W RPS1AP33442 255 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms