RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C ADH7P25377 361 aa3.95□□□□□ -1.78
SMD3YLR147C MTR2P34232 184 aaKnown RBP3.95□□□□□ -1.78
SMD3YLR147C MIC60P36112 540 aa3.95□□□□□ -1.78
SMD3YLR147C MAL33P38157 468 aa3.95□□□□□ -1.78
SMD3YLR147C RTS1P38903 757 aa3.95□□□□□ -1.78
SMD3YLR147C RSM23Q01163 450 aa3.95□□□□□ -1.78
SMD3YLR147C ECM30Q06673 1274 aa3.95□□□□□ -1.78
SMD3YLR147C OPY2Q06810 360 aa3.95□□□□□ -1.78
SMD3YLR147C TEN1Q07921 160 aa3.95□□□□□ -1.78
SMD3YLR147C TCO89Q08921 799 aa3.95□□□□□ -1.78
SMD3YLR147C YML002WP0CF17 737 aa3.94□□□□□ -1.78
SMD3YLR147C MRS3P10566 314 aa3.94□□□□□ -1.78
SMD3YLR147C KAR3P17119 729 aa3.94□□□□□ -1.78
SMD3YLR147C SNC1P31109 117 aa3.94□□□□□ -1.78
SMD3YLR147C ACH1P32316 526 aa3.94□□□□□ -1.78
SMD3YLR147C AUR1P36107 401 aaPredicted RBP3.94□□□□□ -1.78
SMD3YLR147C AGP2P38090 596 aa3.94□□□□□ -1.78
SMD3YLR147C ROT2P38138 954 aa3.94□□□□□ -1.78
SMD3YLR147C TDA7P53882 636 aaPredicted RBP3.94□□□□□ -1.78
SMD3YLR147C EFM6P53970 246 aa3.94□□□□□ -1.78
SMD3YLR147C MSS11Q03825 758 aa3.94□□□□□ -1.78
SMD3YLR147C DIC1Q06143 298 aa3.94□□□□□ -1.78
SMD3YLR147C ARP6Q12509 438 aa3.94□□□□□ -1.78
SMD3YLR147C PDA1P16387 420 aaKnown RBP3.93□□□□□ -1.78
SMD3YLR147C SGV1P23293 657 aaKnown RBP3.93□□□□□ -1.78
SMD3YLR147C BUD5P25300 642 aaPredicted RBP3.93□□□□□ -1.78
SMD3YLR147C SSH4P32343 579 aa3.93□□□□□ -1.78
SMD3YLR147C MCM10P32354 571 aa3.93□□□□□ -1.78
SMD3YLR147C LAG1P38703 411 aa3.93□□□□□ -1.78
SMD3YLR147C AXL1P40851 1208 aa3.93□□□□□ -1.78
SMD3YLR147C DIM1P41819 318 aaKnown RBP3.93□□□□□ -1.78
SMD3YLR147C CRZ1P53968 678 aa3.93□□□□□ -1.78
SMD3YLR147C YVH1Q02256 364 aaKnown RBP3.93□□□□□ -1.78
SMD3YLR147C MSC1Q03104 513 aa3.93□□□□□ -1.78
SMD3YLR147C DPB4Q04603 196 aaKnown RBP3.93□□□□□ -1.78
SMD3YLR147C RTT103Q05543 409 aa3.93□□□□□ -1.78
SMD3YLR147C FMP45Q07651 309 aa3.93□□□□□ -1.78
SMD3YLR147C ETT1Q08421 412 aaKnown RBP3.93□□□□□ -1.78
SMD3YLR147C TIP41Q12199 356 aa3.93□□□□□ -1.78
SMD3YLR147C PDH1Q12428 516 aaKnown RBP3.93□□□□□ -1.78
SMD3YLR147C SPE4Q12455 300 aa3.93□□□□□ -1.78
SMD3YLR147C ARD1P07347 238 aaPredicted RBP3.92□□□□□ -1.78
SMD3YLR147C PUP3P25451 205 aaKnown RBP3.92□□□□□ -1.78
SMD3YLR147C DPB3P27344 201 aa3.92□□□□□ -1.78
SMD3YLR147C YJL068CP40363 299 aa3.92□□□□□ -1.78
SMD3YLR147C RBA50Q04418 439 aa3.92□□□□□ -1.78
SMD3YLR147C SSK1Q07084 712 aa3.92□□□□□ -1.78
SMD3YLR147C CDC16P09798 840 aa3.91□□□□□ -1.78
SMD3YLR147C TYR1P20049 452 aa3.91□□□□□ -1.78
SMD3YLR147C YCK1P23291 538 aa3.91□□□□□ -1.78
SMD3YLR147C PRE8P23639 250 aa3.91□□□□□ -1.78
SMD3YLR147C LOS1P33418 1100 aaPredicted RBP3.91□□□□□ -1.78
SMD3YLR147C MUD2P36084 527 aaKnown RBP3.91□□□□□ -1.78
SMD3YLR147C NUP133P36161 1157 aa3.91□□□□□ -1.78
SMD3YLR147C DHH1P39517 506 aaKnown RBP3.91□□□□□ -1.78
SMD3YLR147C LYS14P40971 790 aa3.91□□□□□ -1.78
SMD3YLR147C APT1P49435 187 aaKnown RBP3.91□□□□□ -1.78
SMD3YLR147C SMM1P53720 384 aaKnown RBP3.91□□□□□ -1.78
SMD3YLR147C SAM50P53969 484 aa3.91□□□□□ -1.78
SMD3YLR147C RPM2Q02773 1202 aa3.91□□□□□ -1.78
SMD3YLR147C YMR160WQ03823 816 aa3.91□□□□□ -1.78
SMD3YLR147C YMR087WQ04299 284 aa3.91□□□□□ -1.78
SMD3YLR147C YMR018WQ04364 514 aa3.91□□□□□ -1.78
SMD3YLR147C HCR1Q05775 265 aaKnown RBP3.91□□□□□ -1.78
SMD3YLR147C YEH2Q07950 538 aa3.91□□□□□ -1.78
SMD3YLR147C THI20Q08224 551 aa3.91□□□□□ -1.78
SMD3YLR147C CHS3P29465 1165 aa3.9□□□□□ -1.79
SMD3YLR147C YBL055CP34220 418 aaPredicted RBP3.9□□□□□ -1.79
SMD3YLR147C RHO4Q00246 291 aa3.9□□□□□ -1.79
SMD3YLR147C YPL014WQ02606 381 aa3.9□□□□□ -1.79
SMD3YLR147C YBR298C-AQ8TGK4 73 aa3.9□□□□□ -1.79
SMD3YLR147C BOS1P25385 244 aa3.89□□□□□ -1.79
SMD3YLR147C CMK1P27466 446 aaKnown RBP3.89□□□□□ -1.79
SMD3YLR147C YKL100CP34248 587 aa3.89□□□□□ -1.79
SMD3YLR147C YEL068CP39977 110 aa3.89□□□□□ -1.79
SMD3YLR147C PTR3P43606 678 aa3.89□□□□□ -1.79
SMD3YLR147C FAR3P46671 204 aa3.89□□□□□ -1.79
SMD3YLR147C LUC7Q07508 261 aaPredicted RBP3.89□□□□□ -1.79
SMD3YLR147C NCE102Q12207 173 aaRIP-Chip data3.89□□□□□ -1.79not detected
SMD3YLR147C MF(ALPHA)1P01149 165 aa3.88□□□□□ -1.79
SMD3YLR147C POL4P25615 582 aa3.88□□□□□ -1.79
SMD3YLR147C IMG1P25626 169 aa3.88□□□□□ -1.79
SMD3YLR147C SSE2P32590 693 aaKnown RBP3.88□□□□□ -1.79
SMD3YLR147C YBR144CP34215 104 aa3.88□□□□□ -1.79
SMD3YLR147C ECM15P35195 104 aa3.88□□□□□ -1.79
SMD3YLR147C KRE9P39005 276 aa3.88□□□□□ -1.79
SMD3YLR147C YTA12P40341 825 aa3.88□□□□□ -1.79
SMD3YLR147C LCL3P53153 274 aa3.88□□□□□ -1.79
SMD3YLR147C DUO1P53168 247 aaKnown RBP3.88□□□□□ -1.79
SMD3YLR147C DRN1P53255 507 aaKnown RBP3.88□□□□□ -1.79
SMD3YLR147C YGR127WP53275 312 aa3.88□□□□□ -1.79
SMD3YLR147C YML037CQ03703 340 aa3.88□□□□□ -1.79
SMD3YLR147C YBR126W-AQ8TGU7 68 aa3.88□□□□□ -1.79
SMD3YLR147C RPL15AP05748 204 aaKnown RBP3.87□□□□□ -1.79
SMD3YLR147C PRP16P15938 1071 aaPredicted RBP3.87□□□□□ -1.79
SMD3YLR147C YIH1P25637 258 aa3.87□□□□□ -1.79
SMD3YLR147C ATS1P31386 333 aa3.87□□□□□ -1.79
SMD3YLR147C VPS17P32913 551 aa3.87□□□□□ -1.79
SMD3YLR147C RPL32P38061 130 aaKnown RBP3.87□□□□□ -1.79
SMD3YLR147C ICS2P38284 255 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms