RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C TY2A-DR1Q12392 438 aa2.07□□□□□ -2.08
RPL40BYKR094C TY2A-OR1Q12439 438 aa2.07□□□□□ -2.08
RPL40BYKR094C TY2A-DR3Q99303 438 aa2.07□□□□□ -2.08
RPL40BYKR094C MPD2Q99316 277 aa2.07□□□□□ -2.08
RPL40BYKR094C CAR1P00812 333 aaKnown RBP2.06□□□□□ -2.08
RPL40BYKR094C CLN3P13365 580 aa2.06□□□□□ -2.08
RPL40BYKR094C YBL059WP34224 193 aa2.06□□□□□ -2.08
RPL40BYKR094C YKL050CP35736 922 aa2.06□□□□□ -2.08
RPL40BYKR094C LAG1P38703 411 aa2.06□□□□□ -2.08
RPL40BYKR094C PYK2P52489 506 aaKnown RBP2.06□□□□□ -2.08
RPL40BYKR094C COG1P53079 417 aa2.06□□□□□ -2.08
RPL40BYKR094C INN1P53901 409 aa2.06□□□□□ -2.08
RPL40BYKR094C ZDS2P54786 942 aa2.06□□□□□ -2.08
RPL40BYKR094C YMR160WQ03823 816 aa2.06□□□□□ -2.08
RPL40BYKR094C RPS10AQ08745 105 aaPredicted RBP2.06□□□□□ -2.08
RPL40BYKR094C RRG7Q08774 242 aaPredicted RBP2.06□□□□□ -2.08
RPL40BYKR094C INP53Q12271 1107 aa2.06□□□□□ -2.08
RPL40BYKR094C PCD1Q12524 340 aa2.06□□□□□ -2.08
RPL40BYKR094C AMD1P15274 810 aaKnown RBP2.05□□□□□ -2.08
RPL40BYKR094C SGV1P23293 657 aaKnown RBP2.05□□□□□ -2.08
RPL40BYKR094C RNA14P25298 677 aaKnown RBP2.05□□□□□ -2.08
RPL40BYKR094C PUT3P25502 979 aaPredicted RBP2.05□□□□□ -2.08
RPL40BYKR094C SHO1P40073 367 aa2.05□□□□□ -2.08
RPL40BYKR094C YNR061CP53747 219 aa2.05□□□□□ -2.08
RPL40BYKR094C DOS2P54858 310 aa2.05□□□□□ -2.08
RPL40BYKR094C ELP3Q02908 557 aaKnown RBP2.05□□□□□ -2.08
RPL40BYKR094C FAB1P34756 2278 aa2.05□□□□□ -2.08
RPL40BYKR094C PUT2P07275 575 aa2.04□□□□□ -2.08
RPL40BYKR094C MSS18P08593 268 aa2.04□□□□□ -2.08
RPL40BYKR094C APE1P14904 514 aa2.04□□□□□ -2.08
RPL40BYKR094C CBF2P32504 956 aa2.04□□□□□ -2.08
RPL40BYKR094C SNU114P36048 1008 aaKnown RBP2.04□□□□□ -2.08
RPL40BYKR094C OSH3P38713 996 aaKnown RBP2.04□□□□□ -2.08
RPL40BYKR094C ALG8P40351 577 aa2.04□□□□□ -2.08
RPL40BYKR094C PFK26P40433 827 aaKnown RBP2.04□□□□□ -2.08
RPL40BYKR094C CSM2P40465 213 aa2.04□□□□□ -2.08
RPL40BYKR094C RHO4Q00246 291 aa2.04□□□□□ -2.08
RPL40BYKR094C RNY1Q02933 434 aaKnown RBP2.04□□□□□ -2.08
RPL40BYKR094C EMI2Q04409 500 aaKnown RBP2.04□□□□□ -2.08
RPL40BYKR094C GLO2Q05584 274 aa2.04□□□□□ -2.08
RPL40BYKR094C SYO1Q07395 620 aa2.04□□□□□ -2.08
RPL40BYKR094C RBD2Q12270 262 aa2.04□□□□□ -2.08
RPL40BYKR094C ERV2Q12284 196 aa2.04□□□□□ -2.08
RPL40BYKR094C YOR019WQ99248 730 aa2.04□□□□□ -2.08
RPL40BYKR094C NCP1P16603 691 aaKnown RBP2.03□□□□□ -2.08
RPL40BYKR094C PAD1P33751 242 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
RPL40BYKR094C SNG1P46950 547 aa2.03□□□□□ -2.08
RPL40BYKR094C SMM1P53720 384 aaKnown RBP2.03□□□□□ -2.08
RPL40BYKR094C YDL009CQ12210 107 aa2.03□□□□□ -2.08
RPL40BYKR094C CTF3Q12748 733 aa2.03□□□□□ -2.08
RPL40BYKR094C CPR1P14832 162 aaKnown RBP2.02□□□□□ -2.09
RPL40BYKR094C SPE2P21182 396 aa2.02□□□□□ -2.09
RPL40BYKR094C CDC15P27636 974 aa2.02□□□□□ -2.09
RPL40BYKR094C YIL067CP40514 678 aa2.02□□□□□ -2.09
RPL40BYKR094C FAF1P40546 346 aaPredicted RBP2.02□□□□□ -2.09
RPL40BYKR094C IOC4Q04213 475 aa2.02□□□□□ -2.09
RPL40BYKR094C PBA1Q05778 276 aa2.02□□□□□ -2.09
RPL40BYKR094C VCX1Q99385 411 aa2.02□□□□□ -2.09
RPL40BYKR094C ARG81P05085 880 aa2.01□□□□□ -2.09
RPL40BYKR094C TPK1P06244 397 aa2.01□□□□□ -2.09
RPL40BYKR094C TSC10P38342 320 aa2.01□□□□□ -2.09
RPL40BYKR094C DBP8P38719 431 aa2.01□□□□□ -2.09
RPL40BYKR094C SEC24P40482 926 aaKnown RBP2.01□□□□□ -2.09
RPL40BYKR094C ARK1P53974 638 aa2.01□□□□□ -2.09
RPL40BYKR094C MRPL35Q06678 367 aa2.01□□□□□ -2.09
RPL40BYKR094C ERG27Q12452 347 aaKnown RBP2.01□□□□□ -2.09
RPL40BYKR094C ADH2P00331 348 aaKnown RBP2□□□□□ -2.09
RPL40BYKR094C HHF1P02309 103 aaKnown RBP2□□□□□ -2.09
RPL40BYKR094C YKL133CP36066 463 aa2□□□□□ -2.09
RPL40BYKR094C UIP3P39547 235 aa2□□□□□ -2.09
RPL40BYKR094C VPS27P40343 622 aaKnown RBP2□□□□□ -2.09
RPL40BYKR094C HIS6P40545 261 aa2□□□□□ -2.09
RPL40BYKR094C FRE1P32791 686 aa1.99□□□□□ -2.09
RPL40BYKR094C HAT2P39984 401 aa1.99□□□□□ -2.09
RPL40BYKR094C RSM23Q01163 450 aa1.99□□□□□ -2.09
RPL40BYKR094C BNA5Q05979 453 aa1.99□□□□□ -2.09
RPL40BYKR094C ECM30Q06673 1274 aa1.99□□□□□ -2.09
RPL40BYKR094C ERG8P24521 451 aa1.98□□□□□ -2.09
RPL40BYKR094C UTH1P36135 365 aa1.98□□□□□ -2.09
RPL40BYKR094C NPR3P38742 1146 aa1.98□□□□□ -2.09
RPL40BYKR094C PSF2P40359 213 aa1.98□□□□□ -2.09
RPL40BYKR094C IST3P40565 148 aaPredicted RBP1.98□□□□□ -2.09
RPL40BYKR094C SCD6P45978 349 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
RPL40BYKR094C SGM1P47166 707 aa1.98□□□□□ -2.09
RPL40BYKR094C TAN1P53072 289 aaPredicted RBP1.98□□□□□ -2.09
RPL40BYKR094C REG1Q00816 1014 aa1.98□□□□□ -2.09
RPL40BYKR094C MRPL51Q06090 140 aaPredicted RBP1.98□□□□□ -2.09
RPL40BYKR094C MLC2Q06580 163 aa1.98□□□□□ -2.09
RPL40BYKR094C PSK2Q08217 1101 aa1.98□□□□□ -2.09
RPL40BYKR094C NKP1Q12493 238 aa1.98□□□□□ -2.09
RPL40BYKR094C SUP35P05453 685 aaKnown RBP1.97□□□□□ -2.09
RPL40BYKR094C LPD1P09624 499 aaKnown RBP1.97□□□□□ -2.09
RPL40BYKR094C SSB1P11484 613 aaKnown RBP1.97□□□□□ -2.09
RPL40BYKR094C ARO2P28777 376 aaKnown RBP1.97□□□□□ -2.09
RPL40BYKR094C TOM20P35180 183 aa1.97□□□□□ -2.09
RPL40BYKR094C MRPL36P36531 177 aa1.97□□□□□ -2.09
RPL40BYKR094C PSD1P39006 500 aa1.97□□□□□ -2.09
RPL40BYKR094C SSB2P40150 613 aaKnown RBP1.97□□□□□ -2.09
RPL40BYKR094C IME4P41833 600 aa1.97□□□□□ -2.09
RPL40BYKR094C ERG26P53199 349 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms