RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPF2	YKR081C	ROT2	P38138	954 aa		4.24	□□□□□ -1.73
RPF2	YKR081C	LAG1	P38703	411 aa		4.24	□□□□□ -1.73
RPF2	YKR081C	AXL1	P40851	1208 aa		4.24	□□□□□ -1.73
RPF2	YKR081C	RPS10B	P46784	105 aa	Known RBP	4.24	□□□□□ -1.73
RPF2	YKR081C	PYK2	P52489	506 aa	Known RBP	4.24	□□□□□ -1.73
RPF2	YKR081C	YGL082W	P53155	381 aa		4.24	□□□□□ -1.73
RPF2	YKR081C	RTS3	P53289	263 aa		4.24	□□□□□ -1.73
RPF2	YKR081C	YMR160W	Q03823	816 aa		4.24	□□□□□ -1.73
RPF2	YKR081C	ECM30	Q06673	1274 aa		4.24	□□□□□ -1.73
RPF2	YKR081C	FMP45	Q07651	309 aa		4.24	□□□□□ -1.73
RPF2	YKR081C	GRC3	Q07845	632 aa		4.24	□□□□□ -1.73
RPF2	YKR081C	RPS10A	Q08745	105 aa	Predicted RBP	4.24	□□□□□ -1.73
RPF2	YKR081C	TCO89	Q08921	799 aa		4.24	□□□□□ -1.73
RPF2	YKR081C	YBR298C-A	Q8TGK4	73 aa		4.24	□□□□□ -1.73
RPF2	YKR081C	PRE8	P23639	250 aa		4.23	□□□□□ -1.73
RPF2	YKR081C	YTA12	P40341	825 aa		4.23	□□□□□ -1.73
RPF2	YKR081C	BSC5	P53755	489 aa		4.23	□□□□□ -1.73
RPF2	YKR081C	ENT4	Q07872	247 aa		4.23	□□□□□ -1.73
RPF2	YKR081C	TEN1	Q07921	160 aa		4.23	□□□□□ -1.73
RPF2	YKR081C	SSP2	Q08646	371 aa		4.23	□□□□□ -1.73
RPF2	YKR081C	SKM1	Q12469	655 aa		4.23	□□□□□ -1.73
RPF2	YKR081C	CDC24	P11433	854 aa	Predicted RBP	4.22	□□□□□ -1.73
RPF2	YKR081C	DHH1	P39517	506 aa	Known RBP	4.22	□□□□□ -1.73
RPF2	YKR081C	RSM23	Q01163	450 aa		4.22	□□□□□ -1.73
RPF2	YKR081C	RTT109	Q07794	436 aa		4.22	□□□□□ -1.73
RPF2	YKR081C	PPT2	Q12036	173 aa		4.22	□□□□□ -1.73
RPF2	YKR081C	MRS3	P10566	314 aa		4.21	□□□□□ -1.74
RPF2	YKR081C	BUD5	P25300	642 aa	Predicted RBP	4.21	□□□□□ -1.74
RPF2	YKR081C	DPB3	P27344	201 aa		4.21	□□□□□ -1.74
RPF2	YKR081C	YNK1	P36010	153 aa	Known RBP	4.21	□□□□□ -1.74
RPF2	YKR081C	RTS1	P38903	757 aa		4.21	□□□□□ -1.74
RPF2	YKR081C	IMP4	P53941	290 aa	Known RBP	4.21	□□□□□ -1.74
RPF2	YKR081C	YVH1	Q02256	364 aa	Known RBP	4.21	□□□□□ -1.74
RPF2	YKR081C	RAD30	Q04049	632 aa		4.21	□□□□□ -1.74
RPF2	YKR081C	RBA50	Q04418	439 aa		4.21	□□□□□ -1.74
RPF2	YKR081C	DPB4	Q04603	196 aa	Known RBP	4.21	□□□□□ -1.74
RPF2	YKR081C	HCR1	Q05775	265 aa	Known RBP	4.21	□□□□□ -1.74
RPF2	YKR081C	CYB2	P00175	591 aa		4.2	□□□□□ -1.74
RPF2	YKR081C	VPS17	P32913	551 aa		4.2	□□□□□ -1.74
RPF2	YKR081C	YKL100C	P34248	587 aa		4.2	□□□□□ -1.74
RPF2	YKR081C	MDM31	P38880	579 aa		4.2	□□□□□ -1.74
RPF2	YKR081C	FAR3	P46671	204 aa		4.2	□□□□□ -1.74
RPF2	YKR081C	IKS1	P47042	667 aa		4.2	□□□□□ -1.74
RPF2	YKR081C	YGR127W	P53275	312 aa		4.2	□□□□□ -1.74
RPF2	YKR081C	SAM50	P53969	484 aa		4.2	□□□□□ -1.74
RPF2	YKR081C	DIC1	Q06143	298 aa		4.2	□□□□□ -1.74
RPF2	YKR081C	OPY2	Q06810	360 aa		4.2	□□□□□ -1.74
RPF2	YKR081C	THI20	Q08224	551 aa		4.2	□□□□□ -1.74
RPF2	YKR081C	PDH1	Q12428	516 aa	Known RBP	4.2	□□□□□ -1.74
RPF2	YKR081C	TRX2	P22803	104 aa	Known RBP	4.19	□□□□□ -1.74
RPF2	YKR081C	RPS2	P25443	254 aa	Known RBP	4.19	□□□□□ -1.74
RPF2	YKR081C	MTR2	P34232	184 aa	Known RBP	4.19	□□□□□ -1.74
RPF2	YKR081C	ECM15	P35195	104 aa		4.19	□□□□□ -1.74
RPF2	YKR081C	MAL33	P38157	468 aa		4.19	□□□□□ -1.74
RPF2	YKR081C	DPH1	P40487	425 aa	Known RBP	4.19	□□□□□ -1.74
RPF2	YKR081C	PTR3	P43606	678 aa		4.19	□□□□□ -1.74
RPF2	YKR081C	ROK1	P45818	564 aa	Predicted RBP	4.19	□□□□□ -1.74
RPF2	YKR081C	LYS4	P49367	693 aa	Predicted RBP	4.19	□□□□□ -1.74
RPF2	YKR081C	SMM1	P53720	384 aa	Known RBP	4.19	□□□□□ -1.74
RPF2	YKR081C	EFM6	P53970	246 aa		4.19	□□□□□ -1.74
RPF2	YKR081C	RHO4	Q00246	291 aa		4.19	□□□□□ -1.74
RPF2	YKR081C	RPM2	Q02773	1202 aa		4.19	□□□□□ -1.74
RPF2	YKR081C	VIP1	Q06685	1146 aa	Known RBP	4.19	□□□□□ -1.74
RPF2	YKR081C	SDH5	Q08230	162 aa		4.19	□□□□□ -1.74
RPF2	YKR081C	SEC62	P21825	274 aa		4.18	□□□□□ -1.74
RPF2	YKR081C	PUP3	P25451	205 aa	Known RBP	4.18	□□□□□ -1.74
RPF2	YKR081C	BUD14	P27637	709 aa		4.18	□□□□□ -1.74
RPF2	YKR081C	YSA1	Q01976	231 aa		4.18	□□□□□ -1.74
RPF2	YKR081C	YPL014W	Q02606	381 aa		4.18	□□□□□ -1.74
RPF2	YKR081C	YMR018W	Q04364	514 aa		4.18	□□□□□ -1.74
RPF2	YKR081C	CDC45	Q08032	650 aa		4.18	□□□□□ -1.74
RPF2	YKR081C	BOS1	P25385	244 aa		4.17	□□□□□ -1.74
RPF2	YKR081C	SYN8	P31377	255 aa		4.17	□□□□□ -1.74
RPF2	YKR081C	YBL055C	P34220	418 aa	Predicted RBP	4.17	□□□□□ -1.74
RPF2	YKR081C	AUR1	P36107	401 aa	Predicted RBP	4.17	□□□□□ -1.74
RPF2	YKR081C	NUP133	P36161	1157 aa		4.17	□□□□□ -1.74
RPF2	YKR081C	RPL15A	P05748	204 aa	Known RBP	4.16	□□□□□ -1.74
RPF2	YKR081C	ARD1	P07347	238 aa	Predicted RBP	4.16	□□□□□ -1.74
RPF2	YKR081C	PRP16	P15938	1071 aa	Predicted RBP	4.16	□□□□□ -1.74
RPF2	YKR081C	CPR3	P25719	182 aa		4.16	□□□□□ -1.74
RPF2	YKR081C	LOS1	P33418	1100 aa	Predicted RBP	4.16	□□□□□ -1.74
RPF2	YKR081C	ICS2	P38284	255 aa		4.16	□□□□□ -1.74
RPF2	YKR081C	KRE9	P39005	276 aa		4.16	□□□□□ -1.74
RPF2	YKR081C	CSM2	P40465	213 aa		4.16	□□□□□ -1.74
RPF2	YKR081C	DUG3	P53871	357 aa		4.16	□□□□□ -1.74
RPF2	YKR081C	BUD22	Q04347	519 aa	Known RBP	4.16	□□□□□ -1.74
RPF2	YKR081C	GLO2	Q05584	274 aa		4.16	□□□□□ -1.74
RPF2	YKR081C	YPL272C	Q08984	517 aa		4.16	□□□□□ -1.74
RPF2	YKR081C	MF(ALPHA)1	P01149	165 aa		4.15	□□□□□ -1.75
RPF2	YKR081C	RPL19A	P0CX82	189 aa	Known RBP	4.15	□□□□□ -1.75
RPF2	YKR081C	RPL19B	P0CX83	189 aa	Predicted RBP	4.15	□□□□□ -1.75
RPF2	YKR081C	KGD1	P20967	1014 aa	Known RBP	4.15	□□□□□ -1.75
RPF2	YKR081C	IMG1	P25626	169 aa		4.15	□□□□□ -1.75
RPF2	YKR081C	YIH1	P25637	258 aa		4.15	□□□□□ -1.75
RPF2	YKR081C	YKL023W	P36103	277 aa	Known RBP	4.15	□□□□□ -1.75
RPF2	YKR081C	RTT101	P47050	842 aa		4.15	□□□□□ -1.75
RPF2	YKR081C	YDL186W	P48568	277 aa		4.15	□□□□□ -1.75
RPF2	YKR081C	APT1	P49435	187 aa	Known RBP	4.15	□□□□□ -1.75
RPF2	YKR081C	SHR3	Q02774	210 aa		4.15	□□□□□ -1.75
RPF2	YKR081C	ERP1	Q05359	219 aa	Known RBP	4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 59.6 ms