RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C SCW10Q04951 389 aa3.45□□□□□ -1.86
YPT52YKR014C RTT103Q05543 409 aa3.45□□□□□ -1.86
YPT52YKR014C ADE13Q05911 482 aaKnown RBP3.45□□□□□ -1.86
YPT52YKR014C DAP1Q12091 152 aa3.45□□□□□ -1.86
YPT52YKR014C PDA1P16387 420 aaKnown RBP3.44□□□□□ -1.86
YPT52YKR014C PWP1P21304 576 aaKnown RBP3.44□□□□□ -1.86
YPT52YKR014C TRX2P22803 104 aaKnown RBP3.44□□□□□ -1.86
YPT52YKR014C LAG1P38703 411 aa3.44□□□□□ -1.86
YPT52YKR014C OPY2Q06810 360 aa3.44□□□□□ -1.86
YPT52YKR014C RIX7Q07844 837 aaKnown RBP3.44□□□□□ -1.86
YPT52YKR014C GRC3Q07845 632 aa3.44□□□□□ -1.86
YPT52YKR014C SDH5Q08230 162 aa3.44□□□□□ -1.86
YPT52YKR014C TYR1P20049 452 aa3.43□□□□□ -1.86
YPT52YKR014C ACH1P32316 526 aa3.43□□□□□ -1.86
YPT52YKR014C VPS17P32913 551 aa3.43□□□□□ -1.86
YPT52YKR014C SPC34P36131 295 aa3.43□□□□□ -1.86
YPT52YKR014C MAL33P38157 468 aa3.43□□□□□ -1.86
YPT52YKR014C YBL029WP38201 376 aa3.43□□□□□ -1.86
YPT52YKR014C ICS2P38284 255 aa3.43□□□□□ -1.86
YPT52YKR014C YTA12P40341 825 aa3.43□□□□□ -1.86
YPT52YKR014C FAR3P46671 204 aa3.43□□□□□ -1.86
YPT52YKR014C SIP4P46954 829 aa3.43□□□□□ -1.86
YPT52YKR014C RSM23Q01163 450 aa3.43□□□□□ -1.86
YPT52YKR014C RAD30Q04049 632 aa3.43□□□□□ -1.86
YPT52YKR014C BUD22Q04347 519 aaKnown RBP3.43□□□□□ -1.86
YPT52YKR014C DPB4Q04603 196 aaKnown RBP3.43□□□□□ -1.86
YPT52YKR014C FMP45Q07651 309 aa3.43□□□□□ -1.86
YPT52YKR014C ENT4Q07872 247 aa3.43□□□□□ -1.86
YPT52YKR014C TEN1Q07921 160 aa3.43□□□□□ -1.86
YPT52YKR014C SSP2Q08646 371 aa3.43□□□□□ -1.86
YPT52YKR014C YMR230W-AQ3E7B5 62 aa3.43□□□□□ -1.86
YPT52YKR014C SSH4P32343 579 aa3.42□□□□□ -1.86
YPT52YKR014C YKL100CP34248 587 aa3.42□□□□□ -1.86
YPT52YKR014C ARP1P38696 384 aa3.42□□□□□ -1.86
YPT52YKR014C AFG3P39925 761 aa3.42□□□□□ -1.86
YPT52YKR014C FMP10P40098 244 aa3.42□□□□□ -1.86
YPT52YKR014C GUF1P46943 645 aa3.42□□□□□ -1.86
YPT52YKR014C DUG3P53871 357 aa3.42□□□□□ -1.86
YPT52YKR014C PPT2Q12036 173 aa3.42□□□□□ -1.86
YPT52YKR014C SEC62P21825 274 aa3.41□□□□□ -1.86
YPT52YKR014C BUD5P25300 642 aaPredicted RBP3.41□□□□□ -1.86
YPT52YKR014C BOS1P25385 244 aa3.41□□□□□ -1.86
YPT52YKR014C AUR1P36107 401 aaPredicted RBP3.41□□□□□ -1.86
YPT52YKR014C IKS1P47042 667 aa3.41□□□□□ -1.86
YPT52YKR014C PYK2P52489 506 aaKnown RBP3.41□□□□□ -1.86
YPT52YKR014C SMM1P53720 384 aaKnown RBP3.41□□□□□ -1.86
YPT52YKR014C SAM50P53969 484 aa3.41□□□□□ -1.86
YPT52YKR014C GLO2Q05584 274 aa3.41□□□□□ -1.86
YPT52YKR014C CDC45Q08032 650 aa3.41□□□□□ -1.86
YPT52YKR014C PDH1Q12428 516 aaKnown RBP3.41□□□□□ -1.86
YPT52YKR014C SUI2P20459 304 aaKnown RBP3.4□□□□□ -1.87
YPT52YKR014C MDM31P38880 579 aa3.4□□□□□ -1.87
YPT52YKR014C DHH1P39517 506 aaKnown RBP3.4□□□□□ -1.87
YPT52YKR014C RPS10BP46784 105 aaKnown RBP3.4□□□□□ -1.87
YPT52YKR014C EFM6P53970 246 aa3.4□□□□□ -1.87
YPT52YKR014C YVH1Q02256 364 aaKnown RBP3.4□□□□□ -1.87
YPT52YKR014C VIP1Q06685 1146 aaKnown RBP3.4□□□□□ -1.87
YPT52YKR014C RPS10AQ08745 105 aaPredicted RBP3.4□□□□□ -1.87
YPT52YKR014C MF(ALPHA)1P01149 165 aa3.39□□□□□ -1.87
YPT52YKR014C IMG1P25626 169 aa3.39□□□□□ -1.87
YPT52YKR014C BUD14P27637 709 aa3.39□□□□□ -1.87
YPT52YKR014C YKL023WP36103 277 aaKnown RBP3.39□□□□□ -1.87
YPT52YKR014C DPH1P40487 425 aaKnown RBP3.39□□□□□ -1.87
YPT52YKR014C ROK1P45818 564 aaPredicted RBP3.39□□□□□ -1.87
YPT52YKR014C YPL014WQ02606 381 aa3.39□□□□□ -1.87
YPT52YKR014C SHR3Q02774 210 aa3.39□□□□□ -1.87
YPT52YKR014C HUA2Q12134 243 aa3.39□□□□□ -1.87
YPT52YKR014C TOP1P04786 769 aa3.38□□□□□ -1.87
YPT52YKR014C PEP5P12868 1029 aa3.38□□□□□ -1.87
YPT52YKR014C MTF1P14908 341 aaKnown RBP3.38□□□□□ -1.87
YPT52YKR014C PUP3P25451 205 aaKnown RBP3.38□□□□□ -1.87
YPT52YKR014C YIH1P25637 258 aa3.38□□□□□ -1.87
YPT52YKR014C YBR144CP34215 104 aa3.38□□□□□ -1.87
YPT52YKR014C YBL055CP34220 418 aaPredicted RBP3.38□□□□□ -1.87
YPT52YKR014C ECM15P35195 104 aa3.38□□□□□ -1.87
YPT52YKR014C RPL32P38061 130 aaKnown RBP3.38□□□□□ -1.87
YPT52YKR014C YBP1P38315 674 aa3.38□□□□□ -1.87
YPT52YKR014C YER130CP39959 443 aa3.38□□□□□ -1.87
YPT52YKR014C YSA1Q01976 231 aa3.38□□□□□ -1.87
YPT52YKR014C RBA50Q04418 439 aa3.38□□□□□ -1.87
YPT52YKR014C DIC1Q06143 298 aa3.38□□□□□ -1.87
YPT52YKR014C THI20Q08224 551 aa3.38□□□□□ -1.87
YPT52YKR014C YBR298C-AQ8TGK4 73 aa3.38□□□□□ -1.87
YPT52YKR014C CAR1P00812 333 aaKnown RBP3.37□□□□□ -1.87
YPT52YKR014C ARD1P07347 238 aaPredicted RBP3.37□□□□□ -1.87
YPT52YKR014C PRP16P15938 1071 aaPredicted RBP3.37□□□□□ -1.87
YPT52YKR014C CHS3P29465 1165 aa3.37□□□□□ -1.87
YPT52YKR014C SSE2P32590 693 aaKnown RBP3.37□□□□□ -1.87
YPT52YKR014C PTR2P32901 601 aa3.37□□□□□ -1.87
YPT52YKR014C MTR2P34232 184 aaKnown RBP3.37□□□□□ -1.87
YPT52YKR014C CSM2P40465 213 aa3.37□□□□□ -1.87
YPT52YKR014C LYS14P40971 790 aa3.37□□□□□ -1.87
YPT52YKR014C SNG1P46950 547 aa3.37□□□□□ -1.87
YPT52YKR014C LYS4P49367 693 aaPredicted RBP3.37□□□□□ -1.87
YPT52YKR014C YGR126WP53274 230 aa3.37□□□□□ -1.87
YPT52YKR014C GIS2P53849 153 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
YPT52YKR014C IMP4P53941 290 aaKnown RBP3.37□□□□□ -1.87
YPT52YKR014C RHO4Q00246 291 aa3.37□□□□□ -1.87
YPT52YKR014C YML037CQ03703 340 aa3.37□□□□□ -1.87
YPT52YKR014C LUC7Q07508 261 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms