RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W MSB1P21339 1137 aaKnown RBP6.19□□□□□ -1.42
PRE3YJL001W MEI4P29467 408 aa6.19□□□□□ -1.42
PRE3YJL001W AEP1P32493 518 aa6.19□□□□□ -1.42
PRE3YJL001W TFC3P34111 1160 aa6.19□□□□□ -1.42
PRE3YJL001W PHO11P35842 467 aa6.19□□□□□ -1.42
PRE3YJL001W PIM1P36775 1133 aa6.19□□□□□ -1.42
PRE3YJL001W PHO12P38693 467 aa6.19□□□□□ -1.42
PRE3YJL001W SEC26P41810 973 aaKnown RBP6.19□□□□□ -1.42
PRE3YJL001W ROK1P45818 564 aaPredicted RBP6.19□□□□□ -1.42
PRE3YJL001W YGL108CP53139 140 aa6.19□□□□□ -1.42
PRE3YJL001W RTS3P53289 263 aa6.19□□□□□ -1.42
PRE3YJL001W GND2P53319 492 aa6.19□□□□□ -1.42
PRE3YJL001W TGL2P54857 326 aa6.19□□□□□ -1.42
PRE3YJL001W SSL1Q04673 461 aaPredicted RBP6.19□□□□□ -1.42
PRE3YJL001W IVY1Q04934 453 aa6.19□□□□□ -1.42
PRE3YJL001W YLR287CQ05881 355 aa6.19□□□□□ -1.42
PRE3YJL001W BSC6Q08280 497 aa6.19□□□□□ -1.42
PRE3YJL001W PTP1P25044 335 aa6.18□□□□□ -1.42
PRE3YJL001W OTU2P38747 307 aaKnown RBP6.18□□□□□ -1.42
PRE3YJL001W PMC1P38929 1173 aaPredicted RBP6.18□□□□□ -1.42
PRE3YJL001W GTS1P40956 396 aa6.18□□□□□ -1.42
PRE3YJL001W BIR1P47134 954 aa6.18□□□□□ -1.42
PRE3YJL001W FRE4P53746 719 aa6.18□□□□□ -1.42
PRE3YJL001W SSL2Q00578 843 aa6.18□□□□□ -1.42
PRE3YJL001W SDH1Q00711 640 aa6.18□□□□□ -1.42
PRE3YJL001W ATP25Q03153 612 aa6.18□□□□□ -1.42
PRE3YJL001W YDR514CQ04408 483 aa6.18□□□□□ -1.42
PRE3YJL001W LDB18Q07887 179 aa6.18□□□□□ -1.42
PRE3YJL001W ACO1P19414 778 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
PRE3YJL001W CLN1P20437 546 aa6.17□□□□□ -1.42
PRE3YJL001W EPT1P22140 391 aa6.17□□□□□ -1.42
PRE3YJL001W DCC1P25559 380 aa6.17□□□□□ -1.42
PRE3YJL001W EMC1P25574 760 aa6.17□□□□□ -1.42
PRE3YJL001W RPN12P32496 274 aa6.17□□□□□ -1.42
PRE3YJL001W STO1P34160 861 aaKnown RBP6.17□□□□□ -1.42
PRE3YJL001W MTC2P34246 357 aa6.17□□□□□ -1.42
PRE3YJL001W VPS24P36095 224 aaKnown RBP6.17□□□□□ -1.42
PRE3YJL001W PCA1P38360 1216 aa6.17□□□□□ -1.42
PRE3YJL001W PTC7P38797 343 aa6.17□□□□□ -1.42
PRE3YJL001W SMC2P38989 1170 aaKnown RBP6.17□□□□□ -1.42
PRE3YJL001W TES1P41903 349 aaKnown RBP6.17□□□□□ -1.42
PRE3YJL001W SPG5P42933 373 aa6.17□□□□□ -1.42
PRE3YJL001W NOG2P53742 486 aaKnown RBP6.17□□□□□ -1.42
PRE3YJL001W VHS1Q03785 461 aa6.17□□□□□ -1.42
PRE3YJL001W YMR160WQ03823 816 aa6.17□□□□□ -1.42
PRE3YJL001W YDR132CQ03900 495 aa6.17□□□□□ -1.42
PRE3YJL001W CIA1Q05583 330 aa6.17□□□□□ -1.42
PRE3YJL001W YDR278CQ05612 105 aa6.17□□□□□ -1.42
PRE3YJL001W RSC3Q06639 885 aa6.17□□□□□ -1.42
PRE3YJL001W SMF3Q12078 473 aaPredicted RBP6.17□□□□□ -1.42
PRE3YJL001W RRP6Q12149 733 aaKnown RBP6.17□□□□□ -1.42
PRE3YJL001W YLR149CQ99296 730 aa6.17□□□□□ -1.42
PRE3YJL001W STT4P37297 1900 aa6.17□□□□□ -1.42
PRE3YJL001W SPS1P08458 490 aa6.16□□□□□ -1.42
PRE3YJL001W TUB3P09734 445 aaKnown RBP6.16□□□□□ -1.42
PRE3YJL001W SPO12P17123 173 aa6.16□□□□□ -1.42
PRE3YJL001W DBF4P32325 704 aa6.16□□□□□ -1.42
PRE3YJL001W RPC82P32349 654 aa6.16□□□□□ -1.42
PRE3YJL001W SPS19P32573 292 aaKnown RBP6.16□□□□□ -1.42
PRE3YJL001W NRP1P32770 719 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
PRE3YJL001W CYM1P32898 989 aa6.16□□□□□ -1.42
PRE3YJL001W ARA1P38115 344 aa6.16□□□□□ -1.42
PRE3YJL001W YBR259WP38338 688 aa6.16□□□□□ -1.42
PRE3YJL001W RTT107P38850 1070 aa6.16□□□□□ -1.42
PRE3YJL001W SMF1P38925 575 aa6.16□□□□□ -1.42
PRE3YJL001W STN1P38960 494 aa6.16□□□□□ -1.42
PRE3YJL001W SSU1P41930 458 aa6.16□□□□□ -1.42
PRE3YJL001W YFR018CP43599 363 aa6.16□□□□□ -1.42
PRE3YJL001W YGR021WP53212 290 aa6.16□□□□□ -1.42
PRE3YJL001W SUR7P54003 302 aa6.16□□□□□ -1.42
PRE3YJL001W TRS23Q03784 219 aa6.16□□□□□ -1.42
PRE3YJL001W ATG16Q03818 150 aa6.16□□□□□ -1.42
PRE3YJL001W EMI1Q04406 187 aa6.16□□□□□ -1.42
PRE3YJL001W THI7Q05998 598 aa6.16□□□□□ -1.42
PRE3YJL001W DIC1Q06143 298 aa6.16□□□□□ -1.42
PRE3YJL001W AAD15Q08361 143 aa6.16□□□□□ -1.42
PRE3YJL001W MCA1Q08601 432 aa6.16□□□□□ -1.42
PRE3YJL001W GUP2Q08929 609 aa6.16□□□□□ -1.42
PRE3YJL001W PFA4Q12006 378 aa6.16□□□□□ -1.42
PRE3YJL001W YLR122CQ12312 125 aa6.16□□□□□ -1.42
PRE3YJL001W YDR262WQ12331 272 aa6.16□□□□□ -1.42
PRE3YJL001W RPL43AP0CX25 92 aaKnown RBP6.15□□□□□ -1.42
PRE3YJL001W RPL43BP0CX26 92 aa6.15□□□□□ -1.42
PRE3YJL001W APA1P16550 321 aaKnown RBP6.15□□□□□ -1.42
PRE3YJL001W PHO13P19881 312 aa6.15□□□□□ -1.42
PRE3YJL001W SFL1P20134 766 aa6.15□□□□□ -1.42
PRE3YJL001W RFA1P22336 621 aaKnown RBP6.15□□□□□ -1.42
PRE3YJL001W YCR006CP25350 157 aa6.15□□□□□ -1.42
PRE3YJL001W MIC60P36112 540 aa6.15□□□□□ -1.42
PRE3YJL001W GMH1P36125 273 aa6.15□□□□□ -1.42
PRE3YJL001W KAE1P36132 386 aa6.15□□□□□ -1.42
PRE3YJL001W MRPL37P36532 105 aa6.15□□□□□ -1.42
PRE3YJL001W DBP8P38719 431 aa6.15□□□□□ -1.42
PRE3YJL001W CYC2P38909 366 aa6.15□□□□□ -1.42
PRE3YJL001W FLC2P39719 783 aa6.15□□□□□ -1.42
PRE3YJL001W MGS1P40151 587 aa6.15□□□□□ -1.42
PRE3YJL001W CAF16P43569 289 aa6.15□□□□□ -1.42
PRE3YJL001W ALK1P43633 760 aaKnown RBP6.15□□□□□ -1.42
PRE3YJL001W TY4A-JP47023 414 aa6.15□□□□□ -1.42
PRE3YJL001W SAP4P53036 818 aa6.15□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms