RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C ARA1P38115 344 aa3.7□□□□□ -1.82
SGN1YIR001C MCM7P38132 845 aa3.7□□□□□ -1.82
SGN1YIR001C IML3P38265 245 aa3.7□□□□□ -1.82
SGN1YIR001C RGI2P40188 164 aa3.7□□□□□ -1.82
SGN1YIR001C IRR1P40541 1150 aa3.7□□□□□ -1.82
SGN1YIR001C SSU1P41930 458 aa3.7□□□□□ -1.82
SGN1YIR001C TYW3P53177 273 aa3.7□□□□□ -1.82
SGN1YIR001C RTS3P53289 263 aa3.7□□□□□ -1.82
SGN1YIR001C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82 RIP-Chip
SGN1YIR001C YMR160WQ03823 816 aa3.7□□□□□ -1.82
SGN1YIR001C GIS1Q03833 894 aa3.7□□□□□ -1.82
SGN1YIR001C THI7Q05998 598 aa3.7□□□□□ -1.82
SGN1YIR001C GUP2Q08929 609 aa3.7□□□□□ -1.82
SGN1YIR001C ACM1Q08981 209 aa3.7□□□□□ -1.82
SGN1YIR001C YBR056W-AI2HB52 66 aa3.69□□□□□ -1.82
SGN1YIR001C HOP1P20050 605 aa3.69□□□□□ -1.82
SGN1YIR001C BAS1P22035 811 aa3.69□□□□□ -1.82
SGN1YIR001C SLY1P22213 666 aa3.69□□□□□ -1.82
SGN1YIR001C NTH1P32356 751 aa3.69□□□□□ -1.82
SGN1YIR001C MVD1P32377 396 aaKnown RBP3.69□□□□□ -1.82
SGN1YIR001C RPN12P32496 274 aa3.69□□□□□ -1.82
SGN1YIR001C CDC13P32797 924 aaKnown RBP3.69□□□□□ -1.82
SGN1YIR001C CTF13P35203 478 aa3.69□□□□□ -1.82
SGN1YIR001C NTR2P36118 322 aaPredicted RBP3.69□□□□□ -1.82
SGN1YIR001C GMH1P36125 273 aa3.69□□□□□ -1.82
SGN1YIR001C PCL5P38794 229 aa3.69□□□□□ -1.82
SGN1YIR001C CHS7P38843 316 aa3.69□□□□□ -1.82
SGN1YIR001C MTG2P38860 518 aa3.69□□□□□ -1.82
SGN1YIR001C PMC1P38929 1173 aaPredicted RBP3.69□□□□□ -1.82
SGN1YIR001C LYS1P38998 373 aaRIP-Chip data3.69□□□□□ -1.82not detected
SGN1YIR001C YMR124WP39523 943 aaKnown RBP3.69□□□□□ -1.82
SGN1YIR001C FLC2P39719 783 aa3.69□□□□□ -1.82
SGN1YIR001C TES1P41903 349 aaKnown RBP3.69□□□□□ -1.82
SGN1YIR001C SPG5P42933 373 aa3.69□□□□□ -1.82
SGN1YIR001C TY4A-JP47023 414 aa3.69□□□□□ -1.82
SGN1YIR001C SAP4P53036 818 aa3.69□□□□□ -1.82
SGN1YIR001C STR3P53101 465 aaKnown RBP3.69□□□□□ -1.82
SGN1YIR001C YGR021WP53212 290 aa3.69□□□□□ -1.82
SGN1YIR001C YGR053CP53234 283 aa3.69□□□□□ -1.82
SGN1YIR001C PBP1P53297 722 aaKnown RBP3.69□□□□□ -1.82
SGN1YIR001C RLI1Q03195 608 aaKnown RBP3.69□□□□□ -1.82
SGN1YIR001C NGL3Q03210 505 aa3.69□□□□□ -1.82
SGN1YIR001C CCE1Q03702 353 aa3.69□□□□□ -1.82
SGN1YIR001C ATG16Q03818 150 aa3.69□□□□□ -1.82
SGN1YIR001C RSF1Q05043 376 aa3.69□□□□□ -1.82
SGN1YIR001C VID22Q05934 901 aa3.69□□□□□ -1.82
SGN1YIR001C YOL024WQ08172 172 aa3.69□□□□□ -1.82
SGN1YIR001C BUD7Q08754 746 aa3.69□□□□□ -1.82
SGN1YIR001C AI5_ALPHAQ9ZZX1 630 aa3.69□□□□□ -1.82
SGN1YIR001C RPS13P05756 151 aaKnown RBP3.68□□□□□ -1.82
SGN1YIR001C RPL11AP0C0W9 174 aaKnown RBP3.68□□□□□ -1.82
SGN1YIR001C RPL43AP0CX25 92 aaKnown RBP3.68□□□□□ -1.82
SGN1YIR001C RPL43BP0CX26 92 aa3.68□□□□□ -1.82
SGN1YIR001C PMS1P14242 873 aa3.68□□□□□ -1.82
SGN1YIR001C ACO1P19414 778 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
SGN1YIR001C YSP3P25036 478 aa3.68□□□□□ -1.82
SGN1YIR001C LDB16P25587 256 aa3.68□□□□□ -1.82
SGN1YIR001C YCR015CP25616 317 aa3.68□□□□□ -1.82
SGN1YIR001C RAD5P32849 1169 aaPredicted RBP3.68□□□□□ -1.82
SGN1YIR001C PRP18P33411 251 aaPredicted RBP3.68□□□□□ -1.82
SGN1YIR001C YKL107WP34251 309 aa3.68□□□□□ -1.82
SGN1YIR001C THI80P35202 319 aa3.68□□□□□ -1.82
SGN1YIR001C BLI1P35727 113 aa3.68□□□□□ -1.82
SGN1YIR001C AIM3P38266 947 aaKnown RBP3.68□□□□□ -1.82
SGN1YIR001C HIS2P38635 335 aa3.68□□□□□ -1.82
SGN1YIR001C DIA4P38705 446 aaPredicted RBP3.68□□□□□ -1.82
SGN1YIR001C LSM5P40089 93 aaKnown RBP3.68□□□□□ -1.82
SGN1YIR001C MGS1P40151 587 aa3.68□□□□□ -1.82
SGN1YIR001C MAD1P40957 749 aa3.68□□□□□ -1.82
SGN1YIR001C YJR030CP47101 745 aa3.68□□□□□ -1.82
SGN1YIR001C NNF1P47149 201 aa3.68□□□□□ -1.82
SGN1YIR001C ASK10P48361 1146 aa3.68□□□□□ -1.82
SGN1YIR001C COG1P53079 417 aa3.68□□□□□ -1.82
SGN1YIR001C ARE2P53629 642 aaKnown RBP3.68□□□□□ -1.82
SGN1YIR001C FRE4P53746 719 aa3.68□□□□□ -1.82
SGN1YIR001C EFM6P53970 246 aa3.68□□□□□ -1.82
SGN1YIR001C TRS23Q03784 219 aa3.68□□□□□ -1.82
SGN1YIR001C RCO1Q04779 684 aa3.68□□□□□ -1.82
SGN1YIR001C ARP9Q05123 467 aa3.68□□□□□ -1.82
SGN1YIR001C YLR001CQ07895 862 aa3.68□□□□□ -1.82
SGN1YIR001C NRT1Q08485 598 aa3.68□□□□□ -1.82
SGN1YIR001C YPL272CQ08984 517 aa3.68□□□□□ -1.82
SGN1YIR001C SMF3Q12078 473 aaPredicted RBP3.68□□□□□ -1.82
SGN1YIR001C ATG9Q12142 997 aa3.68□□□□□ -1.82
SGN1YIR001C YLL056CQ12177 298 aa3.68□□□□□ -1.82
SGN1YIR001C RRP12Q12754 1228 aaKnown RBP3.68□□□□□ -1.82
SGN1YIR001C RPL11BQ3E757 174 aaPredicted RBP3.68□□□□□ -1.82
SGN1YIR001C SLH1P53327 1967 aaKnown RBP3.68□□□□□ -1.82
SGN1YIR001C MEC1P38111 2368 aa3.67□□□□□ -1.82
SGN1YIR001C RPP2AP05319 106 aaKnown RBP3.67□□□□□ -1.82
SGN1YIR001C BCY1P07278 416 aaKnown RBP3.67□□□□□ -1.82
SGN1YIR001C ILS1P09436 1072 aaKnown RBP3.67□□□□□ -1.82
SGN1YIR001C INO1P11986 533 aa3.67□□□□□ -1.82
SGN1YIR001C SPO12P17123 173 aa3.67□□□□□ -1.82
SGN1YIR001C CLN1P20437 546 aa3.67□□□□□ -1.82
SGN1YIR001C NRP1P32770 719 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
SGN1YIR001C MPE1P35728 441 aaKnown RBP3.67□□□□□ -1.82
SGN1YIR001C PHO11P35842 467 aa3.67□□□□□ -1.82
SGN1YIR001C TRM7P38238 310 aaKnown RBP3.67□□□□□ -1.82
SGN1YIR001C RRT2P38332 387 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms