RNA–Protein interactions for RNA: YIL171W

YIL171W, Transcript of Possible pseudogene in strain S288C, yeast

Gene YIL171W, Length 330 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIL171W	YIL171W	APM3	P38153	483 aa		4.21	□□□□□ -1.74
YIL171W	YIL171W	RFS1	P38234	210 aa	Known RBP	4.21	□□□□□ -1.74
YIL171W	YIL171W	FMP10	P40098	244 aa		4.21	□□□□□ -1.74
YIL171W	YIL171W	RIO2	P40160	425 aa	Known RBP	4.21	□□□□□ -1.74
YIL171W	YIL171W	ALG8	P40351	577 aa		4.21	□□□□□ -1.74
YIL171W	YIL171W	JEM1	P40358	645 aa		4.21	□□□□□ -1.74
YIL171W	YIL171W	SIP4	P46954	829 aa		4.21	□□□□□ -1.74
YIL171W	YIL171W	NNF1	P47149	201 aa		4.21	□□□□□ -1.74
YIL171W	YIL171W	COG2	P53271	262 aa		4.21	□□□□□ -1.74
YIL171W	YIL171W	NOP19	P53317	196 aa	Predicted RBP	4.21	□□□□□ -1.74
YIL171W	YIL171W	COS6	P53344	381 aa		4.21	□□□□□ -1.74
YIL171W	YIL171W	ARC35	P53731	342 aa	Known RBP	4.21	□□□□□ -1.74
YIL171W	YIL171W	YNL143C	P53908	130 aa		4.21	□□□□□ -1.74
YIL171W	YIL171W	YNL010W	P53981	241 aa	Known RBP	4.21	□□□□□ -1.74
YIL171W	YIL171W	NUP100	Q02629	959 aa		4.21	□□□□□ -1.74
YIL171W	YIL171W	RMI1	Q02685	241 aa		4.21	□□□□□ -1.74
YIL171W	YIL171W	YMR155W	Q03795	547 aa		4.21	□□□□□ -1.74
YIL171W	YIL171W	BRE4	Q07660	1125 aa		4.21	□□□□□ -1.74
YIL171W	YIL171W	OSW1	Q08692	278 aa		4.21	□□□□□ -1.74
YIL171W	YIL171W	GPN2	Q08726	347 aa	Predicted RBP	4.21	□□□□□ -1.74
YIL171W	YIL171W	YPR202W	Q08993	238 aa		4.21	□□□□□ -1.74
YIL171W	YIL171W	UBX3	Q12229	455 aa		4.21	□□□□□ -1.74
YIL171W	YIL171W	HSH49	Q99181	213 aa	Predicted RBP	4.21	□□□□□ -1.74
YIL171W	YIL171W	CAR1	P00812	333 aa	Known RBP	4.2	□□□□□ -1.74
YIL171W	YIL171W	SEC53	P07283	254 aa	Known RBP	4.2	□□□□□ -1.74
YIL171W	YIL171W	GCD2	P12754	651 aa	Predicted RBP	4.2	□□□□□ -1.74
YIL171W	YIL171W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
YIL171W	YIL171W	YCR099C	P25657	155 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	ATP7	P30902	174 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	COX13	P32799	129 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	SEA4	P38164	1038 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	LDB7	P38210	180 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	YBR259W	P38338	688 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	PEX28	P38848	579 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	IRR1	P40541	1150 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	YIL001W	P40560	513 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	IME4	P41833	600 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	BUD13	P46947	266 aa	Predicted RBP	4.2	□□□□□ -1.74
YIL171W	YIL171W	STR3	P53101	465 aa	Known RBP	4.2	□□□□□ -1.74
YIL171W	YIL171W	SPC105	P53148	917 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	YGR016W	P53209	190 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	CLD1	P53264	445 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	GTR2	P53290	341 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	IBD2	P53892	351 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	ATP25	Q03153	612 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	RPN4	Q03465	531 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	YMR206W	Q03695	313 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	ACL4	Q03771	387 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	YET2	Q04210	160 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	SEG1	Q04279	960 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	SPO20	Q04359	397 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	ECM38	Q05902	660 aa	Predicted RBP	4.2	□□□□□ -1.74
YIL171W	YIL171W	BLS1	Q06071	122 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	YPR114W	Q06107	315 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	SGT1	Q08446	395 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	SLD7	Q08457	257 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	TRE2	Q08693	809 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	HRK1	Q08732	759 aa	Known RBP	4.2	□□□□□ -1.74
YIL171W	YIL171W	YPQ1	Q12010	308 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	HUA2	Q12134	243 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	MCD1	Q12158	566 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	SAS5	Q99314	248 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	UBR2	Q07963	1872 aa		4.2	□□□□□ -1.74
YIL171W	YIL171W	THP2	O13539	261 aa	Known RBP	4.19	□□□□□ -1.74
YIL171W	YIL171W	TPK2	P06245	380 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	COS2	P0CX12	379 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	COS3	P0CX13	379 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	HSF1	P10961	833 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	GLN4	P13188	809 aa	Known RBP	4.19	□□□□□ -1.74
YIL171W	YIL171W	RSR1	P13856	272 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	ARF2	P19146	181 aa	Known RBP	4.19	□□□□□ -1.74
YIL171W	YIL171W	MRPL8	P22353	238 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	CLB3	P24870	427 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	CLB4	P24871	460 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	SPS22	P25380	463 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	MLS1	P30952	554 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	BEM3	P32873	1128 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	TYE7	P33122	291 aa	Predicted RBP	4.19	□□□□□ -1.74
YIL171W	YIL171W	TFC3	P34111	1160 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	SKT5	P34226	696 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	PXA2	P34230	853 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	YKR078W	P36158	585 aa	Known RBP	4.19	□□□□□ -1.74
YIL171W	YIL171W	RIM11	P38615	370 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	SRP72	P38688	640 aa	Known RBP	4.19	□□□□□ -1.74
YIL171W	YIL171W	GGA2	P38817	585 aa	Known RBP	4.19	□□□□□ -1.74
YIL171W	YIL171W	RIX1	P38883	763 aa	Predicted RBP	4.19	□□□□□ -1.74
YIL171W	YIL171W	BEM4	P39011	633 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	MNN1	P39106	762 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	DHH1	P39517	506 aa	Known RBP	4.19	□□□□□ -1.74
YIL171W	YIL171W	DIM1	P41819	318 aa	Known RBP	4.19	□□□□□ -1.74
YIL171W	YIL171W	TES1	P41903	349 aa	Known RBP	4.19	□□□□□ -1.74
YIL171W	YIL171W	COS4	P43542	379 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	GCD14	P46959	383 aa	Predicted RBP	4.19	□□□□□ -1.74
YIL171W	YIL171W	VMA10	P48836	114 aa	Known RBP	4.19	□□□□□ -1.74
YIL171W	YIL171W	AMA1	P50082	593 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	MIG2	P53035	382 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	YGR053C	P53234	283 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	GND2	P53319	492 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	SLM2	P53955	656 aa		4.19	□□□□□ -1.74
YIL171W	YIL171W	ARP4	P80428	489 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms