RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W AIM24P47127 394 aa7.97□□□□□ -1.13
UFD1YGR048W MNP1P53163 194 aaPredicted RBP7.97□□□□□ -1.13
UFD1YGR048W GTF1P53260 183 aaPredicted RBP7.97□□□□□ -1.13
UFD1YGR048W HXT15P54854 567 aa7.97□□□□□ -1.13
UFD1YGR048W YDR541CQ03049 344 aa7.97□□□□□ -1.13
UFD1YGR048W TIF35Q04067 274 aaKnown RBP7.97□□□□□ -1.13
UFD1YGR048W PDR8Q06149 701 aa7.97□□□□□ -1.13
UFD1YGR048W AAD15Q08361 143 aa7.97□□□□□ -1.13
UFD1YGR048W ATP14Q12349 124 aa7.97□□□□□ -1.13
UFD1YGR048W YOS9Q99220 542 aa7.97□□□□□ -1.13
UFD1YGR048W STE2D6VTK4 431 aa7.96□□□□□ -1.14
UFD1YGR048W AEP2P22136 580 aa7.96□□□□□ -1.14
UFD1YGR048W KAP122P32767 1081 aa7.96□□□□□ -1.14
UFD1YGR048W RRN3P36070 627 aa7.96□□□□□ -1.14
UFD1YGR048W BAP2P38084 609 aa7.96□□□□□ -1.14
UFD1YGR048W FMP23P38231 175 aa7.96□□□□□ -1.14
UFD1YGR048W YBR137WP38276 179 aa7.96□□□□□ -1.14
UFD1YGR048W EXO5P38289 585 aa7.96□□□□□ -1.14
UFD1YGR048W YHR131CP38835 850 aa7.96□□□□□ -1.14
UFD1YGR048W DSS1P39112 969 aa7.96□□□□□ -1.14
UFD1YGR048W FHL1P39521 936 aa7.96□□□□□ -1.14
UFD1YGR048W TED1P40533 473 aa7.96□□□□□ -1.14
UFD1YGR048W ROG3P43602 733 aa7.96□□□□□ -1.14
UFD1YGR048W TPN1P53099 579 aa7.96□□□□□ -1.14
UFD1YGR048W SLD3P53135 668 aa7.96□□□□□ -1.14
UFD1YGR048W CWC24P53769 259 aa7.96□□□□□ -1.14
UFD1YGR048W RMI1Q02685 241 aa7.96□□□□□ -1.14
UFD1YGR048W SEN54Q02825 467 aaPredicted RBP7.96□□□□□ -1.14
UFD1YGR048W MRX10Q05648 414 aa7.96□□□□□ -1.14
UFD1YGR048W CRR1Q05790 422 aa7.96□□□□□ -1.14
UFD1YGR048W ADE13Q05911 482 aaKnown RBP7.96□□□□□ -1.14
UFD1YGR048W BUR2Q05949 395 aa7.96□□□□□ -1.14
UFD1YGR048W DUS3Q06053 668 aaKnown RBP7.96□□□□□ -1.14
UFD1YGR048W SYC1Q08553 188 aaPredicted RBP7.96□□□□□ -1.14
UFD1YGR048W MED1Q12321 566 aa7.96□□□□□ -1.14
UFD1YGR048W TUB2P02557 457 aaKnown RBP7.95□□□□□ -1.14
UFD1YGR048W APN1P22936 367 aa7.95□□□□□ -1.14
UFD1YGR048W ATP7P30902 174 aa7.95□□□□□ -1.14
UFD1YGR048W DAL1P32375 460 aa7.95□□□□□ -1.14
UFD1YGR048W YHK8P38776 514 aa7.95□□□□□ -1.14
UFD1YGR048W YEL020CP39994 560 aa7.95□□□□□ -1.14
UFD1YGR048W THO1P40040 218 aaKnown RBP7.95□□□□□ -1.14
UFD1YGR048W NDE1P40215 560 aa7.95□□□□□ -1.14
UFD1YGR048W YKE4P40544 346 aa7.95□□□□□ -1.14
UFD1YGR048W QRI1P43123 477 aaKnown RBP7.95□□□□□ -1.14
UFD1YGR048W HSH155P49955 971 aaKnown RBP7.95□□□□□ -1.14
UFD1YGR048W UBC12P52491 188 aa7.95□□□□□ -1.14
UFD1YGR048W GPI1P53306 609 aa7.95□□□□□ -1.14
UFD1YGR048W REC102Q02721 264 aa7.95□□□□□ -1.14
UFD1YGR048W MYO5Q04439 1219 aaKnown RBP7.95□□□□□ -1.14
UFD1YGR048W ATG38Q05789 226 aaKnown RBP7.95□□□□□ -1.14
UFD1YGR048W GMC2Q06201 188 aa7.95□□□□□ -1.14
UFD1YGR048W REH1Q06709 432 aa7.95□□□□□ -1.14
UFD1YGR048W HAT1Q12341 374 aa7.95□□□□□ -1.14
UFD1YGR048W YOR012WQ12351 137 aa7.95□□□□□ -1.14
UFD1YGR048W STB3Q12427 513 aa7.95□□□□□ -1.14
UFD1YGR048W CMC2Q3E7A4 109 aa7.95□□□□□ -1.14
UFD1YGR048W LAG2Q92325 660 aa7.95□□□□□ -1.14
UFD1YGR048W CIT1P00890 479 aa7.94□□□□□ -1.14
UFD1YGR048W BCY1P07278 416 aaKnown RBP7.94□□□□□ -1.14
UFD1YGR048W MSS18P08593 268 aa7.94□□□□□ -1.14
UFD1YGR048W YEL076C-AP0CX16 216 aa7.94□□□□□ -1.14
UFD1YGR048W YLR464WP0CX17 216 aa7.94□□□□□ -1.14
UFD1YGR048W HYM1P32464 399 aa7.94□□□□□ -1.14
UFD1YGR048W YBR241CP38142 488 aa7.94□□□□□ -1.14
UFD1YGR048W GLO3P38682 493 aaKnown RBP7.94□□□□□ -1.14
UFD1YGR048W IPI1P38803 334 aaPredicted RBP7.94□□□□□ -1.14
UFD1YGR048W BFR1P38934 470 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
UFD1YGR048W DUN1P39009 513 aa7.94□□□□□ -1.14
UFD1YGR048W CCT3P39077 534 aaKnown RBP7.94□□□□□ -1.14
UFD1YGR048W YEL076CP39971 216 aa7.94□□□□□ -1.14
UFD1YGR048W SPF1P39986 1215 aaKnown RBP7.94□□□□□ -1.14
UFD1YGR048W MEP1P40260 492 aa7.94□□□□□ -1.14
UFD1YGR048W PYK2P52489 506 aaKnown RBP7.94□□□□□ -1.14
UFD1YGR048W OKP1P53298 406 aa7.94□□□□□ -1.14
UFD1YGR048W CPR8P53728 308 aa7.94□□□□□ -1.14
UFD1YGR048W CBK1P53894 756 aa7.94□□□□□ -1.14
UFD1YGR048W TRM82Q03774 444 aa7.94□□□□□ -1.14
UFD1YGR048W YDR514CQ04408 483 aa7.94□□□□□ -1.14
UFD1YGR048W UFO1Q04511 668 aa7.94□□□□□ -1.14
UFD1YGR048W BSC2Q05611 235 aa7.94□□□□□ -1.14
UFD1YGR048W FAR10Q06001 478 aa7.94□□□□□ -1.14
UFD1YGR048W SPO77Q06134 477 aa7.94□□□□□ -1.14
UFD1YGR048W GIC2Q06648 383 aa7.94□□□□□ -1.14
UFD1YGR048W FRE5Q08908 694 aa7.94□□□□□ -1.14
UFD1YGR048W SAM4Q08985 325 aaKnown RBP7.94□□□□□ -1.14
UFD1YGR048W MLH3Q12083 715 aa7.94□□□□□ -1.14
UFD1YGR048W DGK1Q12382 290 aa7.94□□□□□ -1.14
UFD1YGR048W CAR1P00812 333 aaKnown RBP7.93□□□□□ -1.14
UFD1YGR048W RAD10P06838 210 aa7.93□□□□□ -1.14
UFD1YGR048W CBP6P07253 162 aaPredicted RBP7.93□□□□□ -1.14
UFD1YGR048W PHO4P07270 312 aaKnown RBP7.93□□□□□ -1.14
UFD1YGR048W UGA1P17649 471 aa7.93□□□□□ -1.14
UFD1YGR048W MRPL8P22353 238 aa7.93□□□□□ -1.14
UFD1YGR048W PTP1P25044 335 aa7.93□□□□□ -1.14
UFD1YGR048W TRK2P28584 889 aa7.93□□□□□ -1.14
UFD1YGR048W NGG1P32494 702 aa7.93□□□□□ -1.14
UFD1YGR048W PRP21P32524 280 aaPredicted RBP7.93□□□□□ -1.14
UFD1YGR048W PEX2P32800 271 aa7.93□□□□□ -1.14
UFD1YGR048W VAM7P32912 316 aa7.93□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms