RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W UBA1P22515 1024 aaKnown RBP5.32□□□□□ -1.56
PDE1YGL248W MVD1P32377 396 aaKnown RBP5.32□□□□□ -1.56
PDE1YGL248W YPT7P32939 208 aa5.32□□□□□ -1.56
PDE1YGL248W YPT52P36018 234 aaKnown RBP5.32□□□□□ -1.56
PDE1YGL248W NUP133P36161 1157 aa5.32□□□□□ -1.56
PDE1YGL248W POP7P38291 140 aa5.32□□□□□ -1.56
PDE1YGL248W SUR2P38992 349 aa5.32□□□□□ -1.56
PDE1YGL248W MPT5P39016 859 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
PDE1YGL248W GPB2P39717 880 aa5.32□□□□□ -1.56
PDE1YGL248W JHD1P40034 492 aa5.32□□□□□ -1.56
PDE1YGL248W SLZ1P40167 298 aa5.32□□□□□ -1.56
PDE1YGL248W MND1P53102 219 aa5.32□□□□□ -1.56
PDE1YGL248W SQS1P53866 767 aaKnown RBP5.32□□□□□ -1.56
PDE1YGL248W HEF3P53978 1044 aaKnown RBP5.32□□□□□ -1.56
PDE1YGL248W RPA49Q01080 415 aaPredicted RBP5.32□□□□□ -1.56
PDE1YGL248W ACS1Q01574 713 aa5.32□□□□□ -1.56
PDE1YGL248W MUB1Q03162 620 aa5.32□□□□□ -1.56
PDE1YGL248W YDR239CQ03780 787 aa5.32□□□□□ -1.56
PDE1YGL248W LRS4Q04087 347 aaKnown RBP5.32□□□□□ -1.56
PDE1YGL248W SPC2Q04969 178 aa5.32□□□□□ -1.56
PDE1YGL248W RTT103Q05543 409 aa5.32□□□□□ -1.56
PDE1YGL248W YLR407WQ06070 228 aa5.32□□□□□ -1.56
PDE1YGL248W VTA1Q06263 330 aa5.32□□□□□ -1.56
PDE1YGL248W YFH1Q07540 174 aa5.32□□□□□ -1.56
PDE1YGL248W SRN2Q99176 213 aa5.32□□□□□ -1.56
PDE1YGL248W SGS1P35187 1447 aa5.31□□□□□ -1.56
PDE1YGL248W HEM1P09950 548 aaPredicted RBP5.31□□□□□ -1.56
PDE1YGL248W TY2A-LR1P0C2J4 438 aa5.31□□□□□ -1.56
PDE1YGL248W TY2A-FP0CX61 438 aa5.31□□□□□ -1.56
PDE1YGL248W TY2A-GR2P0CX62 438 aa5.31□□□□□ -1.56
PDE1YGL248W UGA1P17649 471 aa5.31□□□□□ -1.56
PDE1YGL248W TY2A-CP25383 438 aa5.31□□□□□ -1.56
PDE1YGL248W YCL002CP25565 263 aa5.31□□□□□ -1.56
PDE1YGL248W HXT1P32465 570 aa5.31□□□□□ -1.56
PDE1YGL248W CYM1P32898 989 aa5.31□□□□□ -1.56
PDE1YGL248W ALY1P36117 915 aa5.31□□□□□ -1.56
PDE1YGL248W ADE17P38009 592 aaKnown RBP5.31□□□□□ -1.56
PDE1YGL248W FLR1P38124 548 aa5.31□□□□□ -1.56
PDE1YGL248W TDP1P38319 544 aa5.31□□□□□ -1.56
PDE1YGL248W YHL012WP38709 493 aa5.31□□□□□ -1.56
PDE1YGL248W YHR045WP38775 560 aa5.31□□□□□ -1.56
PDE1YGL248W RTC3P38804 111 aaPredicted RBP5.31□□□□□ -1.56
PDE1YGL248W SET5P38890 526 aaKnown RBP5.31□□□□□ -1.56
PDE1YGL248W YER158CP40095 573 aa5.31□□□□□ -1.56
PDE1YGL248W SNZ3P43545 298 aa5.31□□□□□ -1.56
PDE1YGL248W URB2P47108 1174 aa5.31□□□□□ -1.56
PDE1YGL248W RMR1P53060 241 aa5.31□□□□□ -1.56
PDE1YGL248W TIM21P53220 239 aa5.31□□□□□ -1.56
PDE1YGL248W YGR117CP53270 476 aa5.31□□□□□ -1.56
PDE1YGL248W COQ6P53318 479 aa5.31□□□□□ -1.56
PDE1YGL248W SNZ2P53824 298 aa5.31□□□□□ -1.56
PDE1YGL248W CSL4P53859 292 aaPredicted RBP5.31□□□□□ -1.56
PDE1YGL248W TY2A-DR2Q03483 438 aa5.31□□□□□ -1.56
PDE1YGL248W BNA7Q04066 261 aa5.31□□□□□ -1.56
PDE1YGL248W HRQ1Q05549 1077 aa5.31□□□□□ -1.56
PDE1YGL248W VPS38Q05919 439 aa5.31□□□□□ -1.56
PDE1YGL248W ATG23Q06671 453 aa5.31□□□□□ -1.56
PDE1YGL248W GRS2Q06817 618 aa5.31□□□□□ -1.56
PDE1YGL248W YLL007CQ07799 665 aa5.31□□□□□ -1.56
PDE1YGL248W PUS9Q12069 462 aa5.31□□□□□ -1.56
PDE1YGL248W GET4Q12125 312 aa5.31□□□□□ -1.56
PDE1YGL248W TY2A-BQ12260 438 aa5.31□□□□□ -1.56
PDE1YGL248W TY2A-OR2Q12293 438 aa5.31□□□□□ -1.56
PDE1YGL248W TY2A-DR1Q12392 438 aa5.31□□□□□ -1.56
PDE1YGL248W TY2A-OR1Q12439 438 aa5.31□□□□□ -1.56
PDE1YGL248W ERG27Q12452 347 aaKnown RBP5.31□□□□□ -1.56
PDE1YGL248W TY2A-DR3Q99303 438 aa5.31□□□□□ -1.56
PDE1YGL248W RPL24AP04449 155 aaKnown RBP5.3□□□□□ -1.56
PDE1YGL248W HIP1P06775 603 aa5.3□□□□□ -1.56
PDE1YGL248W LPD1P09624 499 aaKnown RBP5.3□□□□□ -1.56
PDE1YGL248W SEC63P14906 663 aa5.3□□□□□ -1.56
PDE1YGL248W SRV2P17555 526 aaKnown RBP5.3□□□□□ -1.56
PDE1YGL248W ERG8P24521 451 aa5.3□□□□□ -1.56
PDE1YGL248W ARO4P32449 370 aaKnown RBP5.3□□□□□ -1.56
PDE1YGL248W YKL151CP36059 337 aa5.3□□□□□ -1.56
PDE1YGL248W CMC1P36064 111 aa5.3□□□□□ -1.56
PDE1YGL248W AUR1P36107 401 aaPredicted RBP5.3□□□□□ -1.56
PDE1YGL248W VPS51P36116 164 aa5.3□□□□□ -1.56
PDE1YGL248W KTR3P38130 404 aaPredicted RBP5.3□□□□□ -1.56
PDE1YGL248W SLM4P38247 162 aa5.3□□□□□ -1.56
PDE1YGL248W EGD2P38879 174 aaKnown RBP5.3□□□□□ -1.56
PDE1YGL248W PRM9P39551 298 aa5.3□□□□□ -1.56
PDE1YGL248W ALG5P40350 334 aa5.3□□□□□ -1.56
PDE1YGL248W LOH1P47055 219 aa5.3□□□□□ -1.56
PDE1YGL248W PRP31P49704 494 aaPredicted RBP5.3□□□□□ -1.56
PDE1YGL248W DRN1P53255 507 aaKnown RBP5.3□□□□□ -1.56
PDE1YGL248W CAF130P53280 1122 aaPredicted RBP5.3□□□□□ -1.56
PDE1YGL248W YNL146WP53906 100 aa5.3□□□□□ -1.56
PDE1YGL248W SRL4Q03085 281 aa5.3□□□□□ -1.56
PDE1YGL248W MUS81Q04149 632 aaPredicted RBP5.3□□□□□ -1.56
PDE1YGL248W RBS1Q05672 457 aaKnown RBP5.3□□□□□ -1.56
PDE1YGL248W GPN3Q06543 272 aa5.3□□□□□ -1.56
PDE1YGL248W ECM30Q06673 1274 aa5.3□□□□□ -1.56
PDE1YGL248W FMP40Q08968 688 aaPredicted RBP5.3□□□□□ -1.56
PDE1YGL248W ICL2Q12031 575 aa5.3□□□□□ -1.56
PDE1YGL248W UPC2Q12151 913 aa5.3□□□□□ -1.56
PDE1YGL248W YLL058WQ12198 575 aa5.3□□□□□ -1.56
PDE1YGL248W NTO1Q12311 748 aa5.3□□□□□ -1.56
PDE1YGL248W Q0142Q9ZZW4 58 aa5.3□□□□□ -1.56
PDE1YGL248W ILV5P06168 395 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms