RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C HIP1P06775 603 aa3.26□□□□□ -1.89
XRN1YGL173C YCK2P23292 546 aaKnown RBP3.26□□□□□ -1.89
XRN1YGL173C CDC5P32562 705 aa3.26□□□□□ -1.89
XRN1YGL173C GND1P38720 489 aaKnown RBP3.26□□□□□ -1.89
XRN1YGL173C FMO1P38866 432 aa3.26□□□□□ -1.89
XRN1YGL173C YEL068CP39977 110 aa3.26□□□□□ -1.89
XRN1YGL173C TAF6P53040 516 aa3.26□□□□□ -1.89
XRN1YGL173C COS12P53053 380 aa3.26□□□□□ -1.89
XRN1YGL173C SCW11P53189 542 aa3.26□□□□□ -1.89
XRN1YGL173C RCR2Q03446 210 aaKnown RBP3.26□□□□□ -1.89
XRN1YGL173C ATG38Q05789 226 aaKnown RBP3.26□□□□□ -1.89
XRN1YGL173C FRE3Q08905 711 aa3.26□□□□□ -1.89
XRN1YGL173C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
XRN1YGL173C DFG16Q99234 619 aa3.26□□□□□ -1.89
XRN1YGL173C RHO2P06781 192 aa3.26□□□□□ -1.89
XRN1YGL173C RIP1P08067 215 aa3.26□□□□□ -1.89
XRN1YGL173C KRS1P15180 591 aaKnown RBP3.26□□□□□ -1.89
XRN1YGL173C PRP2P20095 876 aaPredicted RBP3.26□□□□□ -1.89
XRN1YGL173C FEN2P25621 512 aaKnown RBP3.26□□□□□ -1.89
XRN1YGL173C HCS1P34243 683 aa3.26□□□□□ -1.89
XRN1YGL173C POA1P38218 177 aa3.26□□□□□ -1.89
XRN1YGL173C SLM4P38247 162 aa3.26□□□□□ -1.89
XRN1YGL173C MNN9P39107 395 aaKnown RBP3.26□□□□□ -1.89
XRN1YGL173C YJL070CP40361 888 aa3.26□□□□□ -1.89
XRN1YGL173C STB2P46679 850 aa3.26□□□□□ -1.89
XRN1YGL173C UBC9P50623 157 aaPredicted RBP3.26□□□□□ -1.89
XRN1YGL173C EFR3Q03653 782 aaKnown RBP3.26□□□□□ -1.89
XRN1YGL173C ECM18Q04623 453 aa3.26□□□□□ -1.89
XRN1YGL173C IZH3Q07959 543 aa3.26□□□□□ -1.89
XRN1YGL173C PNO1Q99216 274 aaKnown RBP3.26□□□□□ -1.89
XRN1YGL173C SCEIP03882 235 aa3.25□□□□□ -1.89
XRN1YGL173C ARG4P04076 463 aaPredicted RBP3.25□□□□□ -1.89
XRN1YGL173C RPC40P07703 335 aaKnown RBP3.25□□□□□ -1.89
XRN1YGL173C SEC12P11655 471 aa3.25□□□□□ -1.89
XRN1YGL173C UBA1P22515 1024 aaKnown RBP3.25□□□□□ -1.89
XRN1YGL173C ERG8P24521 451 aa3.25□□□□□ -1.89
XRN1YGL173C HMX1P32339 317 aa3.25□□□□□ -1.89
XRN1YGL173C SPP381P38282 291 aaPredicted RBP3.25□□□□□ -1.89
XRN1YGL173C TIF4631P39935 952 aaKnown RBP3.25□□□□□ -1.89
XRN1YGL173C SHR5P41912 237 aa3.25□□□□□ -1.89
XRN1YGL173C SOK2P53438 785 aaPredicted RBP3.25□□□□□ -1.89
XRN1YGL173C DAK1P54838 584 aaKnown RBP3.25□□□□□ -1.89
XRN1YGL173C TOF2Q02208 771 aa3.25□□□□□ -1.89
XRN1YGL173C YDR541CQ03049 344 aa3.25□□□□□ -1.89
XRN1YGL173C MRPS17Q03246 237 aaPredicted RBP3.25□□□□□ -1.89
XRN1YGL173C AFT2Q08957 416 aa3.25□□□□□ -1.89
XRN1YGL173C VAM3Q12241 283 aa3.25□□□□□ -1.89
XRN1YGL173C MED4Q12343 284 aa3.25□□□□□ -1.89
XRN1YGL173C PRC1P00729 532 aa3.25□□□□□ -1.89
XRN1YGL173C PCT1P13259 424 aa3.25□□□□□ -1.89
XRN1YGL173C RNR1P21524 888 aaKnown RBP3.25□□□□□ -1.89
XRN1YGL173C TRX1P22217 103 aaKnown RBP3.25□□□□□ -1.89
XRN1YGL173C MAC1P35192 417 aa3.25□□□□□ -1.89
XRN1YGL173C MTW1P39731 289 aa3.25□□□□□ -1.89
XRN1YGL173C IME4P41833 600 aa3.25□□□□□ -1.89
XRN1YGL173C SSU1P41930 458 aa3.25□□□□□ -1.89
XRN1YGL173C PFA3P42836 336 aa3.25□□□□□ -1.89
XRN1YGL173C EPL1P43572 832 aa3.25□□□□□ -1.89
XRN1YGL173C CRF1Q04930 467 aa3.25□□□□□ -1.89
XRN1YGL173C GPN2Q08726 347 aaPredicted RBP3.25□□□□□ -1.89
XRN1YGL173C UBX3Q12229 455 aa3.25□□□□□ -1.89
XRN1YGL173C NDJ1Q12366 352 aa3.25□□□□□ -1.89
XRN1YGL173C MF(ALPHA)1P01149 165 aa3.25□□□□□ -1.89
XRN1YGL173C RBK1P25332 333 aa3.25□□□□□ -1.89
XRN1YGL173C VAM7P32912 316 aa3.25□□□□□ -1.89
XRN1YGL173C LOT5P34234 306 aa3.25□□□□□ -1.89
XRN1YGL173C LAS1P36146 502 aaPredicted RBP3.25□□□□□ -1.89
XRN1YGL173C LCP5P40079 357 aaPredicted RBP3.25□□□□□ -1.89
XRN1YGL173C FTR1P40088 404 aa3.25□□□□□ -1.89
XRN1YGL173C FMC1P40491 155 aa3.25□□□□□ -1.89
XRN1YGL173C YJL055WP47044 245 aa3.25□□□□□ -1.89
XRN1YGL173C YNL143CP53908 130 aa3.25□□□□□ -1.89
XRN1YGL173C ADE16P54113 591 aaKnown RBP3.25□□□□□ -1.89
XRN1YGL173C MCP2Q06567 569 aa3.25□□□□□ -1.89
XRN1YGL173C HMI1Q12039 706 aa3.25□□□□□ -1.89
XRN1YGL173C YMR084WA2P2R3 262 aa3.24□□□□□ -1.89
XRN1YGL173C CLB2P24869 491 aa3.24□□□□□ -1.89
XRN1YGL173C TRM2P33753 639 aa3.24□□□□□ -1.89
XRN1YGL173C YSW1P38280 609 aa3.24□□□□□ -1.89
XRN1YGL173C PEX32P38292 413 aa3.24□□□□□ -1.89
XRN1YGL173C TAE1P38340 232 aa3.24□□□□□ -1.89
XRN1YGL173C PIG2P40187 538 aa3.24□□□□□ -1.89
XRN1YGL173C MMM1P41800 426 aa3.24□□□□□ -1.89
XRN1YGL173C SSY5P47002 699 aa3.24□□□□□ -1.89
XRN1YGL173C SEC5P89102 971 aa3.24□□□□□ -1.89
XRN1YGL173C TSR1Q07381 788 aaKnown RBP3.24□□□□□ -1.89
XRN1YGL173C ATG9Q12142 997 aa3.24□□□□□ -1.89
XRN1YGL173C TAF3Q12297 353 aa3.24□□□□□ -1.89
XRN1YGL173C SIR4P11978 1358 aa3.24□□□□□ -1.89
XRN1YGL173C YLR302CO13544 120 aa3.24□□□□□ -1.89
XRN1YGL173C HIS4P00815 799 aaKnown RBP3.24□□□□□ -1.89
XRN1YGL173C TRP4P07285 380 aaPredicted RBP3.24□□□□□ -1.89
XRN1YGL173C THR4P16120 514 aaKnown RBP3.24□□□□□ -1.89
XRN1YGL173C DSS4P32601 143 aa3.24□□□□□ -1.89
XRN1YGL173C LHS1P36016 881 aa3.24□□□□□ -1.89
XRN1YGL173C COS111P38308 924 aa3.24□□□□□ -1.89
XRN1YGL173C GIP4P39732 760 aa3.24□□□□□ -1.89
XRN1YGL173C ATF1P40353 525 aa3.24□□□□□ -1.89
XRN1YGL173C YIR042CP40586 236 aa3.24□□□□□ -1.89
XRN1YGL173C CTK2P46962 323 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms