RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W ISR1Q06098 443 aaKnown RBP6.68□□□□□ -1.34
NUP49YGL172W APC9Q12107 265 aa6.68□□□□□ -1.34
NUP49YGL172W MDY2Q12285 212 aa6.68□□□□□ -1.34
NUP49YGL172W YOR012WQ12351 137 aa6.68□□□□□ -1.34
NUP49YGL172W GTT2Q12390 233 aa6.68□□□□□ -1.34
NUP49YGL172W YPR089WO13585 888 aa6.67□□□□□ -1.34
NUP49YGL172W TUB1P09733 447 aaKnown RBP6.67□□□□□ -1.34
NUP49YGL172W RPB4P20433 221 aaPredicted RBP6.67□□□□□ -1.34
NUP49YGL172W SNT1P25357 1226 aa6.67□□□□□ -1.34
NUP49YGL172W CIN8P27895 1000 aa6.67□□□□□ -1.34
NUP49YGL172W TFC3P34111 1160 aa6.67□□□□□ -1.34
NUP49YGL172W LRG1P35688 1017 aa6.67□□□□□ -1.34
NUP49YGL172W WSC4P38739 605 aa6.67□□□□□ -1.34
NUP49YGL172W SSN3P39073 555 aa6.67□□□□□ -1.34
NUP49YGL172W RPS26AP39938 119 aaKnown RBP6.67□□□□□ -1.34
NUP49YGL172W RPS26BP39939 119 aaKnown RBP6.67□□□□□ -1.34
NUP49YGL172W IST1P53843 298 aaPredicted RBP6.67□□□□□ -1.34
NUP49YGL172W TGL2P54857 326 aa6.67□□□□□ -1.34
NUP49YGL172W NHP10Q03435 203 aa6.67□□□□□ -1.34
NUP49YGL172W GOT1Q03554 138 aa6.67□□□□□ -1.34
NUP49YGL172W YMR155WQ03795 547 aa6.67□□□□□ -1.34
NUP49YGL172W SPO20Q04359 397 aa6.67□□□□□ -1.34
NUP49YGL172W SPE4Q12455 300 aa6.67□□□□□ -1.34
NUP49YGL172W COX3P00420 269 aa6.67□□□□□ -1.34
NUP49YGL172W INH1P01097 85 aa6.67□□□□□ -1.34
NUP49YGL172W CAN1P04817 590 aa6.67□□□□□ -1.34
NUP49YGL172W SEC2P17065 759 aa6.67□□□□□ -1.34
NUP49YGL172W PHO84P25297 587 aaKnown RBP6.67□□□□□ -1.34
NUP49YGL172W VAC17P25591 423 aa6.67□□□□□ -1.34
NUP49YGL172W RSC6P25632 483 aa6.67□□□□□ -1.34
NUP49YGL172W MCM5P29496 775 aaKnown RBP6.67□□□□□ -1.34
NUP49YGL172W YSC84P32793 468 aa6.67□□□□□ -1.34
NUP49YGL172W THI80P35202 319 aa6.67□□□□□ -1.34
NUP49YGL172W RIM2P38127 377 aa6.67□□□□□ -1.34
NUP49YGL172W YBR197CP38306 217 aa6.67□□□□□ -1.34
NUP49YGL172W MPT5P39016 859 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
NUP49YGL172W CCT6P39079 546 aa6.67□□□□□ -1.34
NUP49YGL172W CIN4P39110 191 aa6.67□□□□□ -1.34
NUP49YGL172W UTP18P40362 594 aaPredicted RBP6.67□□□□□ -1.34
NUP49YGL172W TRS85P46944 698 aa6.67□□□□□ -1.34
NUP49YGL172W KXD1P53158 218 aa6.67□□□□□ -1.34
NUP49YGL172W RCF2P53721 224 aa6.67□□□□□ -1.34
NUP49YGL172W TRM12Q04235 462 aa6.67□□□□□ -1.34
NUP49YGL172W YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
NUP49YGL172W VPS68Q12016 184 aa6.67□□□□□ -1.34
NUP49YGL172W YPL247CQ12523 523 aa6.67□□□□□ -1.34
NUP49YGL172W TY1A-DR4O74302 440 aa6.66□□□□□ -1.34
NUP49YGL172W PHO5P00635 467 aa6.66□□□□□ -1.34
NUP49YGL172W CYT1P07143 309 aa6.66□□□□□ -1.34
NUP49YGL172W TY1A-HP0C2I4 478 aaKnown RBP6.66□□□□□ -1.34
NUP49YGL172W YMR085WP0CF18 432 aa6.66□□□□□ -1.34
NUP49YGL172W TY1A-AP0CX57 440 aa6.66□□□□□ -1.34
NUP49YGL172W TY1A-PR1P0CX58 440 aa6.66□□□□□ -1.34
NUP49YGL172W TY1A-ORP0CX59 440 aa6.66□□□□□ -1.34
NUP49YGL172W TY1A-PR2P0CX60 440 aa6.66□□□□□ -1.34
NUP49YGL172W TY1A-DR5P0CX65 440 aa6.66□□□□□ -1.34
NUP49YGL172W TY1A-ER2P0CX66 440 aa6.66□□□□□ -1.34
NUP49YGL172W TY1A-GR3P0CX67 440 aa6.66□□□□□ -1.34
NUP49YGL172W TY1A-LR1P0CX68 440 aa6.66□□□□□ -1.34
NUP49YGL172W TY1A-MR2P0CX69 440 aa6.66□□□□□ -1.34
NUP49YGL172W VPS34P22543 875 aa6.66□□□□□ -1.34
NUP49YGL172W ATP11P32453 318 aa6.66□□□□□ -1.34
NUP49YGL172W TFB1P32776 642 aa6.66□□□□□ -1.34
NUP49YGL172W YHR020WP38708 688 aaKnown RBP6.66□□□□□ -1.34
NUP49YGL172W YDR089WP38966 869 aa6.66□□□□□ -1.34
NUP49YGL172W PRM2P40534 656 aa6.66□□□□□ -1.34
NUP49YGL172W AXL1P40851 1208 aa6.66□□□□□ -1.34
NUP49YGL172W GAT1P43574 510 aa6.66□□□□□ -1.34
NUP49YGL172W TY1A-JR2P47099 440 aa6.66□□□□□ -1.34
NUP49YGL172W BIR1P47134 954 aa6.66□□□□□ -1.34
NUP49YGL172W AIF1P52923 378 aa6.66□□□□□ -1.34
NUP49YGL172W TEL2P53038 688 aa6.66□□□□□ -1.34
NUP49YGL172W SUB1P54000 292 aaKnown RBP6.66□□□□□ -1.34
NUP49YGL172W RMI1Q02685 241 aa6.66□□□□□ -1.34
NUP49YGL172W TY1A-DR1Q03856 440 aa6.66□□□□□ -1.34
NUP49YGL172W TY1A-ML1Q04706 440 aaKnown RBP6.66□□□□□ -1.34
NUP49YGL172W SEC10Q06245 871 aa6.66□□□□□ -1.34
NUP49YGL172W YFT2Q06676 274 aa6.66□□□□□ -1.34
NUP49YGL172W RTT10Q08924 1013 aa6.66□□□□□ -1.34
NUP49YGL172W TY1A-BRQ12217 440 aa6.66□□□□□ -1.34
NUP49YGL172W TY1A-NL2Q12470 440 aa6.66□□□□□ -1.34
NUP49YGL172W TY1A-GR2Q12485 440 aa6.66□□□□□ -1.34
NUP49YGL172W YAR066WP0CX18 203 aa6.65□□□□□ -1.35
NUP49YGL172W YHR214WP0CX19 203 aa6.65□□□□□ -1.35
NUP49YGL172W YCR090CP25654 182 aaKnown RBP6.65□□□□□ -1.35
NUP49YGL172W MSH1P25846 959 aa6.65□□□□□ -1.35
NUP49YGL172W SPR1P32603 445 aa6.65□□□□□ -1.35
NUP49YGL172W PTH2P34222 208 aa6.65□□□□□ -1.35
NUP49YGL172W SQT1P35184 431 aa6.65□□□□□ -1.35
NUP49YGL172W RPF2P36160 344 aaKnown RBP6.65□□□□□ -1.35
NUP49YGL172W HSE1P38753 452 aa6.65□□□□□ -1.35
NUP49YGL172W YIL108WP40483 696 aaKnown RBP6.65□□□□□ -1.35
NUP49YGL172W YRB1P41920 201 aaKnown RBP6.65□□□□□ -1.35
NUP49YGL172W GCD14P46959 383 aaPredicted RBP6.65□□□□□ -1.35
NUP49YGL172W TIS11P47977 285 aa6.65□□□□□ -1.35
NUP49YGL172W HST3P53687 447 aa6.65□□□□□ -1.35
NUP49YGL172W YNL058CP53947 316 aa6.65□□□□□ -1.35
NUP49YGL172W RPN8Q08723 338 aaKnown RBP6.65□□□□□ -1.35
NUP49YGL172W HEM2P05373 342 aa6.64□□□□□ -1.35
NUP49YGL172W CDC21P06785 304 aa6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 88.2 ms