RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTR3	YFR029W	YLR173W	Q06247	608 aa		4.14	□□□□□ -1.75
PTR3	YFR029W	NTO1	Q12311	748 aa		4.14	□□□□□ -1.75
PTR3	YFR029W	CFT1	Q06632	1357 aa	Known RBP	4.14	□□□□□ -1.75
PTR3	YFR029W	SCH9	P11792	824 aa	Known RBP	4.14	□□□□□ -1.75
PTR3	YFR029W	YCL068C	P25593	260 aa		4.14	□□□□□ -1.75
PTR3	YFR029W	ARO4	P32449	370 aa	Known RBP	4.14	□□□□□ -1.75
PTR3	YFR029W	STE14	P32584	239 aa		4.14	□□□□□ -1.75
PTR3	YFR029W	MNN2	P38069	597 aa		4.14	□□□□□ -1.75
PTR3	YFR029W	ATP3	P38077	311 aa	Known RBP	4.14	□□□□□ -1.75
PTR3	YFR029W	AFG3	P39925	761 aa		4.14	□□□□□ -1.75
PTR3	YFR029W	SDP1	P40479	209 aa		4.14	□□□□□ -1.75
PTR3	YFR029W	SHQ1	P40486	507 aa	Predicted RBP	4.14	□□□□□ -1.75
PTR3	YFR029W	ULP2	P40537	1034 aa	Predicted RBP	4.14	□□□□□ -1.75
PTR3	YFR029W	MND2	P40577	368 aa		4.14	□□□□□ -1.75
PTR3	YFR029W	CTK2	P46962	323 aa		4.14	□□□□□ -1.75
PTR3	YFR029W	YGR066C	P53242	292 aa		4.14	□□□□□ -1.75
PTR3	YFR029W	YGR117C	P53270	476 aa		4.14	□□□□□ -1.75
PTR3	YFR029W	ARG5,6	Q01217	863 aa		4.14	□□□□□ -1.75
PTR3	YFR029W	VPS64	Q03944	604 aa		4.14	□□□□□ -1.75
PTR3	YFR029W	RPN9	Q04062	393 aa	Known RBP	4.14	□□□□□ -1.75
PTR3	YFR029W	MUS81	Q04149	632 aa	Predicted RBP	4.14	□□□□□ -1.75
PTR3	YFR029W	YOL107W	Q12239	342 aa		4.14	□□□□□ -1.75
PTR3	YFR029W	PNO1	Q99216	274 aa	Known RBP	4.14	□□□□□ -1.75
PTR3	YFR029W	ARD1	P07347	238 aa	Predicted RBP	4.13	□□□□□ -1.75
PTR3	YFR029W	PYC1	P11154	1178 aa	Known RBP	4.13	□□□□□ -1.75
PTR3	YFR029W	SRV2	P17555	526 aa	Known RBP	4.13	□□□□□ -1.75
PTR3	YFR029W	HXT1	P32465	570 aa		4.13	□□□□□ -1.75
PTR3	YFR029W	PGM1	P33401	570 aa	Known RBP	4.13	□□□□□ -1.75
PTR3	YFR029W	YKR015C	P36111	568 aa		4.13	□□□□□ -1.75
PTR3	YFR029W	YHL012W	P38709	493 aa		4.13	□□□□□ -1.75
PTR3	YFR029W	CRG1	P38892	291 aa	RIP-Chip data	4.13	□□□□□ -1.75	not detected
PTR3	YFR029W	SEC31	P38968	1273 aa	Known RBP	4.13	□□□□□ -1.75
PTR3	YFR029W	NUP60	P39705	539 aa		4.13	□□□□□ -1.75
PTR3	YFR029W	SDS3	P40505	327 aa		4.13	□□□□□ -1.75
PTR3	YFR029W	IME4	P41833	600 aa		4.13	□□□□□ -1.75
PTR3	YFR029W	PFA3	P42836	336 aa		4.13	□□□□□ -1.75
PTR3	YFR029W	BIT61	P47041	543 aa		4.13	□□□□□ -1.75
PTR3	YFR029W	MND1	P53102	219 aa		4.13	□□□□□ -1.75
PTR3	YFR029W	TWF1	P53250	332 aa		4.13	□□□□□ -1.75
PTR3	YFR029W	RTT102	P53330	157 aa		4.13	□□□□□ -1.75
PTR3	YFR029W	ACL4	Q03771	387 aa		4.13	□□□□□ -1.75
PTR3	YFR029W	SMC5	Q08204	1093 aa		4.13	□□□□□ -1.75
PTR3	YFR029W	LYS21	Q12122	440 aa	Known RBP	4.13	□□□□□ -1.75
PTR3	YFR029W	RLM1	Q12224	676 aa		4.13	□□□□□ -1.75
PTR3	YFR029W	YOR012W	Q12351	137 aa		4.13	□□□□□ -1.75
PTR3	YFR029W	CKA2	P19454	339 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	SAG1	P20840	650 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	PTK1	P36002	662 aa	Predicted RBP	4.12	□□□□□ -1.75
PTR3	YFR029W	TCD2	P36101	447 aa	Known RBP	4.12	□□□□□ -1.75
PTR3	YFR029W	ADE17	P38009	592 aa	Known RBP	4.12	□□□□□ -1.75
PTR3	YFR029W	YHR078W	P38799	552 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	YER085C	P40058	173 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	SEC24	P40482	926 aa	Known RBP	4.12	□□□□□ -1.75
PTR3	YFR029W	HXT14	P42833	540 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	PUS2	P53167	370 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	YGR012W	P53206	393 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	PGA2	P53903	129 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	YNL144C	P53907	740 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	CLU1	Q03690	1277 aa	Known RBP	4.12	□□□□□ -1.75
PTR3	YFR029W	SLK19	Q08581	821 aa	Known RBP	4.12	□□□□□ -1.75
PTR3	YFR029W	YDR061W	Q12298	539 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	YPR089W	O13585	888 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	RSR1	P13856	272 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	IDH2	P28241	369 aa	Known RBP	4.12	□□□□□ -1.75
PTR3	YFR029W	NTH1	P32356	751 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	TIF3	P34167	436 aa	Known RBP	4.12	□□□□□ -1.75
PTR3	YFR029W	KES1	P35844	434 aa	Known RBP	4.12	□□□□□ -1.75
PTR3	YFR029W	KKQ8	P36004	724 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	YHR045W	P38775	560 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	FAD1	P38913	306 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	SAK1	P38990	1142 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	CEM1	P39525	442 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	GTS1	P40956	396 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	YJL132W	P47014	750 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	TOM22	P49334	152 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	PRP31	P49704	494 aa	Predicted RBP	4.12	□□□□□ -1.75
PTR3	YFR029W	MPS2	P53159	387 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	CGR1	P53188	120 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	HEF3	P53978	1044 aa	Known RBP	4.12	□□□□□ -1.75
PTR3	YFR029W	SPO19	Q03029	223 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	RLI1	Q03195	608 aa	Known RBP	4.12	□□□□□ -1.75
PTR3	YFR029W	YLR346C	Q06139	101 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	TLG2	Q08144	397 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	GPN2	Q08726	347 aa	Predicted RBP	4.12	□□□□□ -1.75
PTR3	YFR029W	NUS1	Q12063	375 aa		4.12	□□□□□ -1.75
PTR3	YFR029W	SSK22	P25390	1331 aa	Predicted RBP	4.11	□□□□□ -1.75
PTR3	YFR029W	MAK5	P38112	773 aa	Predicted RBP	4.11	□□□□□ -1.75
PTR3	YFR029W	TOS1	P38288	455 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	MCX1	P38323	520 aa	Predicted RBP	4.11	□□□□□ -1.75
PTR3	YFR029W	TAE1	P38340	232 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	YHR112C	P38716	378 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	AKR1	P39010	764 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	PEX7	P39108	375 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	FTR1	P40088	404 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	YRB2	P40517	327 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	CTR1	P49573	406 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	IMD4	P50094	524 aa	Known RBP	4.11	□□□□□ -1.75
PTR3	YFR029W	RMD9	P53140	646 aa	Known RBP	4.11	□□□□□ -1.75
PTR3	YFR029W	ASI2	P53895	289 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	PET117	Q02771	107 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms