RNA–Protein interactions for RNA: YFR013W

IOC3, Transcript of Subunit of the Isw1a complex, yeast

Gene IOC3, Length 2,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IOC3	YFR013W	MRPL23	Q12487	163 aa	Predicted RBP	3.2	□□□□□ -1.9
IOC3	YFR013W	DNA2	P38859	1522 aa		3.2	□□□□□ -1.9
IOC3	YFR013W	RPP2A	P05319	106 aa	Known RBP	3.19	□□□□□ -1.9
IOC3	YFR013W	RAD7	P06779	565 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	HIS5	P07172	385 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	ARG80	P07249	177 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	RSR1	P13856	272 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	TAL1	P15019	335 aa	Known RBP	3.19	□□□□□ -1.9
IOC3	YFR013W	PRP4	P20053	465 aa	Known RBP	3.19	□□□□□ -1.9
IOC3	YFR013W	KGD1	P20967	1014 aa	Known RBP	3.19	□□□□□ -1.9
IOC3	YFR013W	VPS1	P21576	704 aa	Known RBP	3.19	□□□□□ -1.9
IOC3	YFR013W	HXT1	P32465	570 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	YME2	P32843	850 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	TGL1	P34163	548 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	ADE17	P38009	592 aa	Known RBP	3.19	□□□□□ -1.9
IOC3	YFR013W	MAL32	P38158	584 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	TDA3	P38758	523 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	PSD1	P39006	500 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	FLC2	P39719	783 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	YER085C	P40058	173 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	VMA13	P41807	478 aa	Known RBP	3.19	□□□□□ -1.9
IOC3	YFR013W	OTU1	P43558	301 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	CHA4	P43634	648 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	SIP4	P46954	829 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	GLG2	P47011	380 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	MPS2	P53159	387 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	SLX9	P53251	210 aa	Predicted RBP	3.19	□□□□□ -1.9
IOC3	YFR013W	MAL12	P53341	584 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	SAM50	P53969	484 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	GPD1	Q00055	391 aa	Known RBP	3.19	□□□□□ -1.9
IOC3	YFR013W	KRE28	Q04431	385 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	SPC24	Q04477	213 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	ATG23	Q06671	453 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	YDL114W	Q07530	308 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	GPB1	Q08886	897 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	SWT1	Q12104	458 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	CDC24	P11433	854 aa	Predicted RBP	3.19	□□□□□ -1.9
IOC3	YFR013W	RAP1	P11938	827 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	PRP16	P15938	1071 aa	Predicted RBP	3.19	□□□□□ -1.9
IOC3	YFR013W	SPE2	P21182	396 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	PHO3	P24031	467 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	YCR051W	P25631	222 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	PEP3	P27801	918 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	CSE1	P33307	960 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	MAC1	P35192	417 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	KSP1	P38691	1029 aa	Known RBP	3.19	□□□□□ -1.9
IOC3	YFR013W	MNN9	P39107	395 aa	Known RBP	3.19	□□□□□ -1.9
IOC3	YFR013W	SHQ1	P40486	507 aa	Predicted RBP	3.19	□□□□□ -1.9
IOC3	YFR013W	FMC1	P40491	155 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	ALB1	P47019	175 aa	Predicted RBP	3.19	□□□□□ -1.9
IOC3	YFR013W	MPS3	P47069	682 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	MRX6	P48564	524 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	ALT2	P52892	507 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	DUO1	P53168	247 aa	Known RBP	3.19	□□□□□ -1.9
IOC3	YFR013W	BET4	Q00618	327 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	YMR102C	Q03177	834 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	YHM2	Q04013	314 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	MMR1	Q06324	491 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	CDA2	Q06703	312 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	YPD1	Q07688	167 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	CTI6	Q08923	506 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	YDL109C	Q12103	647 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	CTF3	Q12748	733 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	YBR126W-A	Q8TGU7	68 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	NCB2	Q92317	146 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	MTR10	Q99189	972 aa		3.19	□□□□□ -1.9
IOC3	YFR013W	SUI3	P09064	285 aa	Known RBP	3.18	□□□□□ -1.9
IOC3	YFR013W	CDC26	P14724	124 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	DAP2	P18962	818 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	RNR1	P21524	888 aa	Known RBP	3.18	□□□□□ -1.9
IOC3	YFR013W	CDC10	P25342	322 aa	Known RBP	3.18	□□□□□ -1.9
IOC3	YFR013W	CAP1	P28495	268 aa	Known RBP	3.18	□□□□□ -1.9
IOC3	YFR013W	HXT4	P32467	576 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	CTF13	P35203	478 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	YKR051W	P36142	418 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	TAE1	P38340	232 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	LYS9	P38999	446 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	YFR018C	P43599	363 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	UBC9	P50623	157 aa	Predicted RBP	3.18	□□□□□ -1.9
IOC3	YFR013W	AQR1	P53943	586 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	VAC7	P53950	1165 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	MRS2	Q01926	470 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	RVB1	Q03940	463 aa	Known RBP	3.18	□□□□□ -1.9
IOC3	YFR013W	CRR1	Q05790	422 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	RXT3	Q07458	294 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	SRO7	Q12038	1033 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	AEP3	Q12089	606 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	GET3	Q12154	354 aa	Known RBP	3.18	□□□□□ -1.9
IOC3	YFR013W	ACF2	Q12168	779 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	TFB5	Q3E7C1	72 aa	Predicted RBP	3.18	□□□□□ -1.9
IOC3	YFR013W	YLR149C	Q99296	730 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	PHO5	P00635	467 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	MET3	P08536	511 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	ISY1	P21374	235 aa	Predicted RBP	3.18	□□□□□ -1.9
IOC3	YFR013W	CDC20	P26309	610 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	ZIP1	P31111	875 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	CYM1	P32898	989 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	YHR078W	P38799	552 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	SSO2	P39926	295 aa		3.18	□□□□□ -1.9
IOC3	YFR013W	YEL057C	P39983	233 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms