RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W KAP114P53067 1004 aa5.25□□□□□ -1.57
UBP9YER098W DRN1P53255 507 aaKnown RBP5.25□□□□□ -1.57
UBP9YER098W GAD1Q04792 585 aa5.25□□□□□ -1.57
UBP9YER098W YAP7Q08182 245 aa5.25□□□□□ -1.57
UBP9YER098W THI72Q08579 599 aa5.25□□□□□ -1.57
UBP9YER098W TGL5Q12043 749 aa5.25□□□□□ -1.57
UBP9YER098W BRR1Q99177 341 aaPredicted RBP5.25□□□□□ -1.57
UBP9YER098W CTT1P06115 562 aa5.24□□□□□ -1.57
UBP9YER098W ERG11P10614 530 aa5.24□□□□□ -1.57
UBP9YER098W GCN3P14741 305 aa5.24□□□□□ -1.57
UBP9YER098W URE2P23202 354 aaKnown RBP5.24□□□□□ -1.57
UBP9YER098W BMH1P29311 267 aaKnown RBP5.24□□□□□ -1.57
UBP9YER098W PRE2P30656 287 aaKnown RBP5.24□□□□□ -1.57
UBP9YER098W COQ2P32378 372 aa5.24□□□□□ -1.57
UBP9YER098W FMP33P46998 180 aa5.24□□□□□ -1.57
UBP9YER098W TAM41P53230 385 aa5.24□□□□□ -1.57
UBP9YER098W COP1P53622 1201 aaKnown RBP5.24□□□□□ -1.57
UBP9YER098W NRG1Q03125 231 aa5.24□□□□□ -1.57
UBP9YER098W RAD30Q04049 632 aa5.24□□□□□ -1.57
UBP9YER098W AIM6Q07716 390 aa5.24□□□□□ -1.57
UBP9YER098W DNL4Q08387 944 aaPredicted RBP5.24□□□□□ -1.57
UBP9YER098W RTN2Q12443 393 aa5.24□□□□□ -1.57
UBP9YER098W TUS1Q06412 1307 aa5.24□□□□□ -1.57
UBP9YER098W HIS4P00815 799 aaKnown RBP5.23□□□□□ -1.57
UBP9YER098W HIS5P07172 385 aa5.23□□□□□ -1.57
UBP9YER098W SEC63P14906 663 aa5.23□□□□□ -1.57
UBP9YER098W GPI10P30777 616 aa5.23□□□□□ -1.57
UBP9YER098W YKR015CP36111 568 aa5.23□□□□□ -1.57
UBP9YER098W RFC3P38629 340 aa5.23□□□□□ -1.57
UBP9YER098W JEM1P40358 645 aa5.23□□□□□ -1.57
UBP9YER098W YFL066CP43538 392 aa5.23□□□□□ -1.57
UBP9YER098W ATP22P50273 684 aaPredicted RBP5.23□□□□□ -1.57
UBP9YER098W MRM2P53123 320 aa5.23□□□□□ -1.57
UBP9YER098W ALE1Q08548 619 aa5.23□□□□□ -1.57
UBP9YER098W YLR122CQ12312 125 aa5.23□□□□□ -1.57
UBP9YER098W RAD61Q99359 647 aa5.23□□□□□ -1.57
UBP9YER098W LAM4P38800 1345 aa5.23□□□□□ -1.57
UBP9YER098W ITR2P30606 609 aa5.23□□□□□ -1.57
UBP9YER098W ORC2P32833 620 aa5.23□□□□□ -1.57
UBP9YER098W PGM1P33401 570 aaKnown RBP5.23□□□□□ -1.57
UBP9YER098W HES1P35843 434 aa5.23□□□□□ -1.57
UBP9YER098W HSM3P38348 480 aa5.23□□□□□ -1.57
UBP9YER098W HAM1P47119 197 aaKnown RBP5.23□□□□□ -1.57
UBP9YER098W DCP2P53550 970 aaKnown RBP5.23□□□□□ -1.57
UBP9YER098W CSL4P53859 292 aaPredicted RBP5.23□□□□□ -1.57
UBP9YER098W OSH6Q02201 448 aa5.23□□□□□ -1.57
UBP9YER098W MCP2Q06567 569 aa5.23□□□□□ -1.57
UBP9YER098W UIP4Q08926 304 aa5.23□□□□□ -1.57
UBP9YER098W DAS2Q12084 232 aa5.23□□□□□ -1.57
UBP9YER098W BUG1Q12191 341 aa5.23□□□□□ -1.57
UBP9YER098W RIO1Q12196 484 aaKnown RBP5.23□□□□□ -1.57
UBP9YER098W RSF2P46974 1380 aa5.23□□□□□ -1.57
UBP9YER098W ATP2P00830 511 aaKnown RBP5.22□□□□□ -1.57
UBP9YER098W TUF1P02992 437 aaKnown RBP5.22□□□□□ -1.57
UBP9YER098W RPP2AP05319 106 aaKnown RBP5.22□□□□□ -1.57
UBP9YER098W HEM1P09950 548 aaPredicted RBP5.22□□□□□ -1.57
UBP9YER098W YCK1P23291 538 aa5.22□□□□□ -1.57
UBP9YER098W SLM4P38247 162 aa5.22□□□□□ -1.57
UBP9YER098W AVT6P40074 448 aa5.22□□□□□ -1.57
UBP9YER098W FAR7P43592 221 aa5.22□□□□□ -1.57
UBP9YER098W USE1P53146 245 aa5.22□□□□□ -1.57
UBP9YER098W ERB1Q04660 807 aaKnown RBP5.22□□□□□ -1.57
UBP9YER098W RCO1Q04779 684 aa5.22□□□□□ -1.57
UBP9YER098W STP3Q05937 343 aa5.22□□□□□ -1.57
UBP9YER098W DIA2Q08496 732 aaPredicted RBP5.22□□□□□ -1.57
UBP9YER098W NPC2Q12408 173 aa5.22□□□□□ -1.57
UBP9YER098W SEC12P11655 471 aa5.22□□□□□ -1.57
UBP9YER098W YCK2P23292 546 aaKnown RBP5.22□□□□□ -1.57
UBP9YER098W DPH2P32461 534 aa5.22□□□□□ -1.57
UBP9YER098W ANP1P32629 500 aa5.22□□□□□ -1.57
UBP9YER098W TPO5P36029 618 aa5.22□□□□□ -1.57
UBP9YER098W SMC2P38989 1170 aaKnown RBP5.22□□□□□ -1.57
UBP9YER098W AST2P39945 430 aaKnown RBP5.22□□□□□ -1.57
UBP9YER098W CHA4P43634 648 aa5.22□□□□□ -1.57
UBP9YER098W MTL1P53214 551 aa5.22□□□□□ -1.57
UBP9YER098W TOF1P53840 1238 aa5.22□□□□□ -1.57
UBP9YER098W GET4Q12125 312 aa5.22□□□□□ -1.57
UBP9YER098W TIP41Q12199 356 aa5.22□□□□□ -1.57
UBP9YER098W FAS2P19097 1887 aaKnown RBP5.22□□□□□ -1.57
UBP9YER098W TY4B-HP0C2J7 1802 aa5.22□□□□□ -1.57
UBP9YER098W TY4B-JP47024 1803 aa5.22□□□□□ -1.57
UBP9YER098W REP1P03871 373 aa5.21□□□□□ -1.58
UBP9YER098W SSC1P0CS90 654 aaKnown RBP5.21□□□□□ -1.58
UBP9YER098W KGD2P19262 463 aaPredicted RBP5.21□□□□□ -1.58
UBP9YER098W PRP6P19735 899 aaPredicted RBP5.21□□□□□ -1.58
UBP9YER098W OSM1P21375 501 aaKnown RBP5.21□□□□□ -1.58
UBP9YER098W EMC1P25574 760 aa5.21□□□□□ -1.58
UBP9YER098W PRP45P28004 379 aaPredicted RBP5.21□□□□□ -1.58
UBP9YER098W YME1P32795 747 aa5.21□□□□□ -1.58
UBP9YER098W TAT1P38085 619 aa5.21□□□□□ -1.58
UBP9YER098W YBR032WP38223 100 aa5.21□□□□□ -1.58
UBP9YER098W PFF1P38244 976 aa5.21□□□□□ -1.58
UBP9YER098W COS111P38308 924 aa5.21□□□□□ -1.58
UBP9YER098W YBR242WP38331 238 aa5.21□□□□□ -1.58
UBP9YER098W ERG7P38604 731 aa5.21□□□□□ -1.58
UBP9YER098W LYS9P38999 446 aa5.21□□□□□ -1.58
UBP9YER098W UBP7P40453 1071 aa5.21□□□□□ -1.58
UBP9YER098W YIL077CP40508 320 aa5.21□□□□□ -1.58
UBP9YER098W RIM8P53179 542 aa5.21□□□□□ -1.58
UBP9YER098W YNR061CP53747 219 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms