RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	YMR262W	P38430	313 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	PTC7	P38797	343 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	SPC97	P38863	823 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	YHR202W	P38887	602 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	RMD6	P39975	231 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	RTT105	P40063	208 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	AVT6	P40074	448 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	DPH1	P40487	425 aa	Known RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	GTS1	P40956	396 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	UFE1	P41834	346 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	RRT6	P53117	311 aa	Predicted RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	MET13	P53128	600 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	DAK1	P54838	584 aa	Known RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	RPT6	Q01939	405 aa	Known RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	DUS3	Q06053	668 aa	Known RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	YDR306C	Q06640	478 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	HIM1	Q06674	414 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	SWA2	Q06677	668 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	UBX5	Q06682	500 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	YDL121C	Q07541	149 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	RSC58	Q07979	502 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	NBA1	Q08229	501 aa	Known RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	MED7	Q08278	222 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	PPM2	Q08282	695 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	RSB1	Q08417	382 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	SLD7	Q08457	257 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	PPR1	P07272	904 aa	Predicted RBP	4.56	□□□□□ -1.68
TFB3	YDR460W	CIT2	P08679	460 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	GUK1	P15454	187 aa	Known RBP	4.56	□□□□□ -1.68
TFB3	YDR460W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
TFB3	YDR460W	GLK1	P17709	500 aa	Known RBP	4.56	□□□□□ -1.68
TFB3	YDR460W	VPS33	P20795	691 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	PRP22	P24384	1145 aa	Known RBP	4.56	□□□□□ -1.68
TFB3	YDR460W	PTP1	P25044	335 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	RPS7A	P26786	190 aa	Known RBP	4.56	□□□□□ -1.68
TFB3	YDR460W	ANP1	P32629	500 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	TRM2	P33753	639 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	UTP30	P36144	274 aa	Known RBP	4.56	□□□□□ -1.68
TFB3	YDR460W	STV1	P37296	890 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	YBR259W	P38338	688 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	SDH8	P38345	138 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	MMS21	P38632	267 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	YHI9	P38765	294 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	FAA2	P39518	744 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	MEP1	P40260	492 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	SOK1	P40317	901 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	HPM1	P40481	377 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	YNL320W	P42840	284 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	PRP24	P49960	444 aa	Known RBP	4.56	□□□□□ -1.68
TFB3	YDR460W	DAM1	P53267	343 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	MRPS35	P53292	345 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
TFB3	YDR460W	SED5	Q01590	340 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	UTP6	Q02354	440 aa	Known RBP	4.56	□□□□□ -1.68
TFB3	YDR460W	MTG1	Q03151	367 aa	Predicted RBP	4.56	□□□□□ -1.68
TFB3	YDR460W	SSY1	Q03770	852 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	SNX41	Q04053	625 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	BUR2	Q05949	395 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	SMD2	Q06217	110 aa	Known RBP	4.56	□□□□□ -1.68
TFB3	YDR460W	MLH2	Q07980	695 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	ZEO1	Q08245	113 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	AFT2	Q08957	416 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	OSW2	Q12202	724 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	RIB2	Q12362	591 aa	Known RBP	4.56	□□□□□ -1.68
TFB3	YDR460W	TRM11	Q12463	433 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	RRP12	Q12754	1228 aa	Known RBP	4.56	□□□□□ -1.68
TFB3	YDR460W	DFG16	Q99234	619 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	VCX1	Q99385	411 aa		4.56	□□□□□ -1.68
TFB3	YDR460W	IMA3	P0CW40	589 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	IMA4	P0CW41	589 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	DSF1	P0CX08	502 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	YNR073C	P0CX09	502 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	PET54	P10834	293 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	MRP7	P12687	371 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	ABF1	P14164	731 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	ADP1	P25371	1049 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	CMK1	P27466	446 aa	Known RBP	4.55	□□□□□ -1.68
TFB3	YDR460W	MCM4	P30665	933 aa	Known RBP	4.55	□□□□□ -1.68
TFB3	YDR460W	AAR2	P32357	355 aa	Predicted RBP	4.55	□□□□□ -1.68
TFB3	YDR460W	HIR1	P32479	840 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	HBS1	P32769	611 aa	Known RBP	4.55	□□□□□ -1.68
TFB3	YDR460W	GDH2	P33327	1092 aa	Known RBP	4.55	□□□□□ -1.68
TFB3	YDR460W	TOM20	P35180	183 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	YKL151C	P36059	337 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	SPC34	P36131	295 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	YKR073C	P36153	106 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	ECM31	P38122	312 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	PPS1	P38148	807 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	SLM4	P38247	162 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	TSC10	P38342	320 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	PLB1	P39105	664 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	STL1	P39932	569 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	ECM10	P39987	644 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	SWM2	P40342	146 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	SLM1	P40485	686 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	AGE2	P40529	298 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	RET2	P43621	546 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	MSE1	P48525	536 aa		4.55	□□□□□ -1.68
TFB3	YDR460W	PYK2	P52489	506 aa	Known RBP	4.55	□□□□□ -1.68
TFB3	YDR460W	ZDS2	P54786	942 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms