RNA–Protein interactions for RNA: YDR235W

PRP42, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP42, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP42YDR235W AMD1P15274 810 aaKnown RBP0.91□□□□□ -2.26
PRP42YDR235W CBF2P32504 956 aa0.91□□□□□ -2.26
PRP42YDR235W PAD1P33751 242 aaKnown RBP RIP-Chip data0.91□□□□□ -2.26not detected
PRP42YDR235W SHO1P40073 367 aa0.91□□□□□ -2.26
PRP42YDR235W CSM2P40465 213 aa0.91□□□□□ -2.26
PRP42YDR235W RPS10BP46784 105 aaKnown RBP0.91□□□□□ -2.26
PRP42YDR235W SNG1P46950 547 aa0.91□□□□□ -2.26
PRP42YDR235W ASE1P50275 885 aa0.91□□□□□ -2.26
PRP42YDR235W PYK2P52489 506 aaKnown RBP0.91□□□□□ -2.26
PRP42YDR235W ZDS2P54786 942 aa0.91□□□□□ -2.26
PRP42YDR235W YMR160WQ03823 816 aa0.91□□□□□ -2.26
PRP42YDR235W PBA1Q05778 276 aa0.91□□□□□ -2.26
PRP42YDR235W MPD2Q99316 277 aa0.91□□□□□ -2.26
PRP42YDR235W BI3Q9ZZW7 517 aa0.91□□□□□ -2.26
PRP42YDR235W HHF1P02309 103 aaKnown RBP0.9□□□□□ -2.26
PRP42YDR235W SUP35P05453 685 aaKnown RBP0.9□□□□□ -2.26
PRP42YDR235W PUT2P07275 575 aa0.9□□□□□ -2.26
PRP42YDR235W TY2A-LR1P0C2J4 438 aa0.9□□□□□ -2.26
PRP42YDR235W TY2A-FP0CX61 438 aa0.9□□□□□ -2.26
PRP42YDR235W TY2A-GR2P0CX62 438 aa0.9□□□□□ -2.26
PRP42YDR235W APE1P14904 514 aa0.9□□□□□ -2.26
PRP42YDR235W SGV1P23293 657 aaKnown RBP0.9□□□□□ -2.26
PRP42YDR235W TY2A-CP25383 438 aa0.9□□□□□ -2.26
PRP42YDR235W YKL050CP35736 922 aa0.9□□□□□ -2.26
PRP42YDR235W ROT2P38138 954 aa0.9□□□□□ -2.26
PRP42YDR235W OSH3P38713 996 aaKnown RBP0.9□□□□□ -2.26
PRP42YDR235W YIL067CP40514 678 aa0.9□□□□□ -2.26
PRP42YDR235W DPB11P47027 764 aaPredicted RBP0.9□□□□□ -2.26
PRP42YDR235W RHO4Q00246 291 aa0.9□□□□□ -2.26
PRP42YDR235W TY2A-DR2Q03483 438 aa0.9□□□□□ -2.26
PRP42YDR235W GLO2Q05584 274 aa0.9□□□□□ -2.26
PRP42YDR235W MRPL35Q06678 367 aa0.9□□□□□ -2.26
PRP42YDR235W SYO1Q07395 620 aa0.9□□□□□ -2.26
PRP42YDR235W TMA16Q08687 178 aa0.9□□□□□ -2.26
PRP42YDR235W YDL009CQ12210 107 aa0.9□□□□□ -2.26
PRP42YDR235W TY2A-BQ12260 438 aa0.9□□□□□ -2.26
PRP42YDR235W INP53Q12271 1107 aa0.9□□□□□ -2.26
PRP42YDR235W TY2A-OR2Q12293 438 aa0.9□□□□□ -2.26
PRP42YDR235W TY2A-DR1Q12392 438 aa0.9□□□□□ -2.26
PRP42YDR235W TY2A-OR1Q12439 438 aa0.9□□□□□ -2.26
PRP42YDR235W CTF3Q12748 733 aa0.9□□□□□ -2.26
PRP42YDR235W TY2A-DR3Q99303 438 aa0.9□□□□□ -2.26
PRP42YDR235W ADH2P00331 348 aaKnown RBP0.89□□□□□ -2.27
PRP42YDR235W SST2P11972 698 aaKnown RBP0.89□□□□□ -2.27
PRP42YDR235W CPR1P14832 162 aaKnown RBP0.89□□□□□ -2.27
PRP42YDR235W CLB4P24871 460 aa0.89□□□□□ -2.27
PRP42YDR235W ARO2P28777 376 aaKnown RBP0.89□□□□□ -2.27
PRP42YDR235W SNU114P36048 1008 aaKnown RBP0.89□□□□□ -2.27
PRP42YDR235W YKL133CP36066 463 aa0.89□□□□□ -2.27
PRP42YDR235W UTH1P36135 365 aa0.89□□□□□ -2.27
PRP42YDR235W PUG1P40100 303 aa0.89□□□□□ -2.27
PRP42YDR235W TAN1P53072 289 aaPredicted RBP0.89□□□□□ -2.27
PRP42YDR235W YNR061CP53747 219 aa0.89□□□□□ -2.27
PRP42YDR235W ARK1P53974 638 aa0.89□□□□□ -2.27
PRP42YDR235W TGL2P54857 326 aa0.89□□□□□ -2.27
PRP42YDR235W TSA2Q04120 196 aa0.89□□□□□ -2.27
PRP42YDR235W HIM1Q06674 414 aa0.89□□□□□ -2.27
PRP42YDR235W RPS10AQ08745 105 aaPredicted RBP0.89□□□□□ -2.27
PRP42YDR235W TMA7Q3E764 64 aaKnown RBP0.89□□□□□ -2.27
PRP42YDR235W ARG81P05085 880 aa0.89□□□□□ -2.27
PRP42YDR235W GRX7P38068 203 aa0.89□□□□□ -2.27
PRP42YDR235W MRP21P38175 177 aa0.89□□□□□ -2.27
PRP42YDR235W TIF4631P39935 952 aaKnown RBP0.89□□□□□ -2.27
PRP42YDR235W HAT2P39984 401 aa0.89□□□□□ -2.27
PRP42YDR235W HIS6P40545 261 aa0.89□□□□□ -2.27
PRP42YDR235W COG1P53079 417 aa0.89□□□□□ -2.27
PRP42YDR235W SMM1P53720 384 aaKnown RBP0.89□□□□□ -2.27
PRP42YDR235W EMI2Q04409 500 aaKnown RBP0.89□□□□□ -2.27
PRP42YDR235W CIA1Q05583 330 aa0.89□□□□□ -2.27
PRP42YDR235W BNA5Q05979 453 aa0.89□□□□□ -2.27
PRP42YDR235W PCD1Q12524 340 aa0.89□□□□□ -2.27
PRP42YDR235W GAL1P04385 528 aa0.88□□□□□ -2.27
PRP42YDR235W LPD1P09624 499 aaKnown RBP0.88□□□□□ -2.27
PRP42YDR235W NCP1P16603 691 aaKnown RBP0.88□□□□□ -2.27
PRP42YDR235W PCL1P24867 279 aa0.88□□□□□ -2.27
PRP42YDR235W RVS161P25343 265 aaKnown RBP0.88□□□□□ -2.27
PRP42YDR235W CDC60P26637 1090 aaKnown RBP0.88□□□□□ -2.27
PRP42YDR235W CDC15P27636 974 aa0.88□□□□□ -2.27
PRP42YDR235W FRE1P32791 686 aa0.88□□□□□ -2.27
PRP42YDR235W MRP4P32902 394 aa0.88□□□□□ -2.27
PRP42YDR235W TOM20P35180 183 aa0.88□□□□□ -2.27
PRP42YDR235W TSC10P38342 320 aa0.88□□□□□ -2.27
PRP42YDR235W DBP8P38719 431 aa0.88□□□□□ -2.27
PRP42YDR235W UIP3P39547 235 aa0.88□□□□□ -2.27
PRP42YDR235W FMP10P40098 244 aa0.88□□□□□ -2.27
PRP42YDR235W VPS27P40343 622 aaKnown RBP0.88□□□□□ -2.27
PRP42YDR235W PFK26P40433 827 aaKnown RBP0.88□□□□□ -2.27
PRP42YDR235W FAF1P40546 346 aaPredicted RBP0.88□□□□□ -2.27
PRP42YDR235W REE1P40893 198 aa0.88□□□□□ -2.27
PRP42YDR235W SCD6P45978 349 aaKnown RBP RIP-Chip data0.88□□□□□ -2.27 RIP-Chip
PRP42YDR235W PEX8P53248 589 aa0.88□□□□□ -2.27
PRP42YDR235W SHY1P53266 389 aa0.88□□□□□ -2.27
PRP42YDR235W MET14Q02196 202 aa0.88□□□□□ -2.27
PRP42YDR235W RRN11Q04712 507 aa0.88□□□□□ -2.27
PRP42YDR235W NYV1Q12255 253 aa0.88□□□□□ -2.27
PRP42YDR235W COX17Q12287 69 aa0.88□□□□□ -2.27
PRP42YDR235W NKP1Q12493 238 aa0.88□□□□□ -2.27
PRP42YDR235W YOR019WQ99248 730 aa0.88□□□□□ -2.27
PRP42YDR235W VCX1Q99385 411 aa0.88□□□□□ -2.27
PRP42YDR235W MSS18P08593 268 aa0.87□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms