RNA–Protein interactions for RNA: YDR195W

REF2, Transcript of RNA-binding protein, yeast

Gene REF2, Length 1,602 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REF2	YDR195W	YOL087C	Q99247	1116 aa		3.44	□□□□□ -1.86
REF2	YDR195W	RPL15A	P05748	204 aa	Known RBP	3.44	□□□□□ -1.86
REF2	YDR195W	CBS2	P14905	389 aa		3.44	□□□□□ -1.86
REF2	YDR195W	NOP1	P15646	327 aa	Known RBP	3.44	□□□□□ -1.86
REF2	YDR195W	PWP1	P21304	576 aa	Known RBP	3.44	□□□□□ -1.86
REF2	YDR195W	CBF2	P32504	956 aa		3.44	□□□□□ -1.86
REF2	YDR195W	VPS17	P32913	551 aa		3.44	□□□□□ -1.86
REF2	YDR195W	FMP10	P40098	244 aa		3.44	□□□□□ -1.86
REF2	YDR195W	DIA3	P52290	468 aa		3.44	□□□□□ -1.86
REF2	YDR195W	YGR021W	P53212	290 aa		3.44	□□□□□ -1.86
REF2	YDR195W	YVH1	Q02256	364 aa	Known RBP	3.44	□□□□□ -1.86
REF2	YDR195W	RPS10A	Q08745	105 aa	Predicted RBP	3.44	□□□□□ -1.86
REF2	YDR195W	LEU9	Q12166	604 aa	Known RBP	3.44	□□□□□ -1.86
REF2	YDR195W	PDH1	Q12428	516 aa	Known RBP	3.44	□□□□□ -1.86
REF2	YDR195W	ADH7	P25377	361 aa		3.43	□□□□□ -1.86
REF2	YDR195W	MRS6	P32864	603 aa	Known RBP	3.43	□□□□□ -1.86
REF2	YDR195W	SLC1	P33333	303 aa		3.43	□□□□□ -1.86
REF2	YDR195W	ECM15	P35195	104 aa		3.43	□□□□□ -1.86
REF2	YDR195W	YNK1	P36010	153 aa	Known RBP	3.43	□□□□□ -1.86
REF2	YDR195W	KTR3	P38130	404 aa	Predicted RBP	3.43	□□□□□ -1.86
REF2	YDR195W	ROT2	P38138	954 aa		3.43	□□□□□ -1.86
REF2	YDR195W	TPM2	P40414	161 aa		3.43	□□□□□ -1.86
REF2	YDR195W	RTT101	P47050	842 aa		3.43	□□□□□ -1.86
REF2	YDR195W	RTT109	Q07794	436 aa		3.43	□□□□□ -1.86
REF2	YDR195W	CDC45	Q08032	650 aa		3.43	□□□□□ -1.86
REF2	YDR195W	RPS2	P25443	254 aa	Known RBP	3.42	□□□□□ -1.86
REF2	YDR195W	AVT5	P38176	459 aa		3.42	□□□□□ -1.86
REF2	YDR195W	KAP123	P40069	1113 aa	Known RBP	3.42	□□□□□ -1.86
REF2	YDR195W	RPS7B	P48164	190 aa	Known RBP	3.42	□□□□□ -1.86
REF2	YDR195W	COS10	P52924	374 aa		3.42	□□□□□ -1.86
REF2	YDR195W	BOR1	P53838	576 aa		3.42	□□□□□ -1.86
REF2	YDR195W	DIC1	Q06143	298 aa		3.42	□□□□□ -1.86
REF2	YDR195W	GRC3	Q07845	632 aa		3.42	□□□□□ -1.86
REF2	YDR195W	GDH1	P07262	454 aa	Known RBP	3.41	□□□□□ -1.86
REF2	YDR195W	MTF1	P14908	341 aa	Known RBP	3.41	□□□□□ -1.86
REF2	YDR195W	VMA16	P23968	213 aa		3.41	□□□□□ -1.86
REF2	YDR195W	RPH1	P39956	796 aa		3.41	□□□□□ -1.86
REF2	YDR195W	YJL213W	P40896	331 aa		3.41	□□□□□ -1.86
REF2	YDR195W	RHO4	Q00246	291 aa		3.41	□□□□□ -1.86
REF2	YDR195W	RSM23	Q01163	450 aa		3.41	□□□□□ -1.86
REF2	YDR195W	SMA2	Q04658	369 aa		3.41	□□□□□ -1.86
REF2	YDR195W	SNO4	Q04902	237 aa		3.41	□□□□□ -1.86
REF2	YDR195W	ECM30	Q06673	1274 aa		3.41	□□□□□ -1.86
REF2	YDR195W	HSP33	Q08914	237 aa	Known RBP	3.41	□□□□□ -1.86
REF2	YDR195W	HSP32	Q08992	237 aa		3.41	□□□□□ -1.86
REF2	YDR195W	SEC62	P21825	274 aa		3.41	□□□□□ -1.86
REF2	YDR195W	BUD5	P25300	642 aa	Predicted RBP	3.41	□□□□□ -1.86
REF2	YDR195W	NDC1	P32500	655 aa		3.41	□□□□□ -1.86
REF2	YDR195W	AGP2	P38090	596 aa		3.41	□□□□□ -1.86
REF2	YDR195W	AXL2	P38928	823 aa		3.41	□□□□□ -1.86
REF2	YDR195W	YJL132W	P47014	750 aa		3.41	□□□□□ -1.86
REF2	YDR195W	SIP2	P34164	415 aa	Known RBP	3.4	□□□□□ -1.87
REF2	YDR195W	MTR2	P34232	184 aa	Known RBP	3.4	□□□□□ -1.87
REF2	YDR195W	CSM2	P40465	213 aa		3.4	□□□□□ -1.87
REF2	YDR195W	RPR2	P40571	144 aa		3.4	□□□□□ -1.87
REF2	YDR195W	YPL014W	Q02606	381 aa		3.4	□□□□□ -1.87
REF2	YDR195W	YMR087W	Q04299	284 aa		3.4	□□□□□ -1.87
REF2	YDR195W	RIX7	Q07844	837 aa	Known RBP	3.4	□□□□□ -1.87
REF2	YDR195W	TEN1	Q07921	160 aa		3.4	□□□□□ -1.87
REF2	YDR195W	SDH5	Q08230	162 aa		3.4	□□□□□ -1.87
REF2	YDR195W	YLL056C	Q12177	298 aa		3.4	□□□□□ -1.87
REF2	YDR195W	SET6	Q12529	373 aa		3.4	□□□□□ -1.87
REF2	YDR195W	MCK1	P21965	375 aa	Known RBP	3.39	□□□□□ -1.87
REF2	YDR195W	SPC110	P32380	944 aa		3.39	□□□□□ -1.87
REF2	YDR195W	PTR2	P32901	601 aa		3.39	□□□□□ -1.87
REF2	YDR195W	YKL100C	P34248	587 aa		3.39	□□□□□ -1.87
REF2	YDR195W	YBP1	P38315	674 aa		3.39	□□□□□ -1.87
REF2	YDR195W	YFR016C	P43597	1233 aa	Known RBP	3.39	□□□□□ -1.87
REF2	YDR195W	SIP4	P46954	829 aa		3.39	□□□□□ -1.87
REF2	YDR195W	SMM1	P53720	384 aa	Known RBP	3.39	□□□□□ -1.87
REF2	YDR195W	ATG16	Q03818	150 aa		3.39	□□□□□ -1.87
REF2	YDR195W	ATS1	P31386	333 aa		3.38	□□□□□ -1.87
REF2	YDR195W	ARC1	P46672	376 aa	Known RBP	3.38	□□□□□ -1.87
REF2	YDR195W	EFM6	P53970	246 aa		3.38	□□□□□ -1.87
REF2	YDR195W	VMS1	Q04311	632 aa	Known RBP	3.38	□□□□□ -1.87
REF2	YDR195W	GLO2	Q05584	274 aa		3.38	□□□□□ -1.87
REF2	YDR195W	AGA1	P32323	725 aa		3.37	□□□□□ -1.87
REF2	YDR195W	RRN3	P36070	627 aa		3.37	□□□□□ -1.87
REF2	YDR195W	YPI1	P43587	155 aa		3.37	□□□□□ -1.87
REF2	YDR195W	YGR127W	P53275	312 aa		3.37	□□□□□ -1.87
REF2	YDR195W	DPB4	Q04603	196 aa	Known RBP	3.37	□□□□□ -1.87
REF2	YDR195W	TCO89	Q08921	799 aa		3.37	□□□□□ -1.87
REF2	YDR195W	PUP3	P25451	205 aa	Known RBP	3.37	□□□□□ -1.87
REF2	YDR195W	FAR3	P46671	204 aa		3.37	□□□□□ -1.87
REF2	YDR195W	YJR008W	P47085	338 aa		3.37	□□□□□ -1.87
REF2	YDR195W	ALT2	P52892	507 aa		3.37	□□□□□ -1.87
REF2	YDR195W	PEP5	P12868	1029 aa		3.36	□□□□□ -1.87
REF2	YDR195W	APE1	P14904	514 aa		3.36	□□□□□ -1.87
REF2	YDR195W	AMD1	P15274	810 aa	Known RBP	3.36	□□□□□ -1.87
REF2	YDR195W	SYN8	P31377	255 aa		3.36	□□□□□ -1.87
REF2	YDR195W	YBL055C	P34220	418 aa	Predicted RBP	3.36	□□□□□ -1.87
REF2	YDR195W	VPS24	P36095	224 aa	Known RBP	3.36	□□□□□ -1.87
REF2	YDR195W	NUP133	P36161	1157 aa		3.36	□□□□□ -1.87
REF2	YDR195W	TIF5	P38431	405 aa	Known RBP	3.36	□□□□□ -1.87
REF2	YDR195W	CBK1	P53894	756 aa		3.36	□□□□□ -1.87
REF2	YDR195W	SHR3	Q02774	210 aa		3.36	□□□□□ -1.87
REF2	YDR195W	ENT4	Q07872	247 aa		3.36	□□□□□ -1.87
REF2	YDR195W	AYT1	Q12226	474 aa		3.36	□□□□□ -1.87
REF2	YDR195W	FUM1	P08417	488 aa	Known RBP	3.35	□□□□□ -1.87
REF2	YDR195W	RPL20A	P0CX23	172 aa	Known RBP	3.35	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms