RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	TIP20	P33891	701 aa		6.3	□□□□□ -1.4
CDC1	YDR182W	RRP1	P35178	278 aa	Predicted RBP	6.3	□□□□□ -1.4
CDC1	YDR182W	TOM20	P35180	183 aa		6.3	□□□□□ -1.4
CDC1	YDR182W	SQT1	P35184	431 aa		6.3	□□□□□ -1.4
CDC1	YDR182W	TRM7	P38238	310 aa	Known RBP	6.3	□□□□□ -1.4
CDC1	YDR182W	YHR033W	P38690	423 aa		6.3	□□□□□ -1.4
CDC1	YDR182W	YHI9	P38765	294 aa		6.3	□□□□□ -1.4
CDC1	YDR182W	PLB1	P39105	664 aa		6.3	□□□□□ -1.4
CDC1	YDR182W	NDC80	P40460	691 aa		6.3	□□□□□ -1.4
CDC1	YDR182W	RHO3	Q00245	231 aa	Known RBP	6.3	□□□□□ -1.4
CDC1	YDR182W	SIZ1	Q04195	904 aa		6.3	□□□□□ -1.4
CDC1	YDR182W	YDR109C	Q04585	715 aa		6.3	□□□□□ -1.4
CDC1	YDR182W	SSL1	Q04673	461 aa	Predicted RBP	6.3	□□□□□ -1.4
CDC1	YDR182W	GUP2	Q08929	609 aa		6.3	□□□□□ -1.4
CDC1	YDR182W	GLE1	Q12315	538 aa		6.3	□□□□□ -1.4
CDC1	YDR182W	YOR012W	Q12351	137 aa		6.3	□□□□□ -1.4
CDC1	YDR182W	STE2	D6VTK4	431 aa		6.29	□□□□□ -1.4
CDC1	YDR182W	RAD1	P06777	1100 aa		6.29	□□□□□ -1.4
CDC1	YDR182W	RPB2	P08518	1224 aa	Known RBP	6.29	□□□□□ -1.4
CDC1	YDR182W	SPO16	P17122	198 aa		6.29	□□□□□ -1.4
CDC1	YDR182W	MF(ALPHA)2	P32435	120 aa		6.29	□□□□□ -1.4
CDC1	YDR182W	HOG1	P32485	435 aa		6.29	□□□□□ -1.4
CDC1	YDR182W	MEI5	P32489	222 aa		6.29	□□□□□ -1.4
CDC1	YDR182W	LRG1	P35688	1017 aa		6.29	□□□□□ -1.4
CDC1	YDR182W	YHR020W	P38708	688 aa	Known RBP	6.29	□□□□□ -1.4
CDC1	YDR182W	GAT1	P43574	510 aa		6.29	□□□□□ -1.4
CDC1	YDR182W	YGR266W	P53326	701 aa		6.29	□□□□□ -1.4
CDC1	YDR182W	TRM12	Q04235	462 aa		6.29	□□□□□ -1.4
CDC1	YDR182W	CUE5	Q08412	411 aa	Known RBP	6.29	□□□□□ -1.4
CDC1	YDR182W	MRH1	Q12117	320 aa	Predicted RBP	6.29	□□□□□ -1.4
CDC1	YDR182W	TRA1	P38811	3744 aa		6.29	□□□□□ -1.4
CDC1	YDR182W	SWI5	P08153	709 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	ILS1	P09436	1072 aa	Known RBP	6.28	□□□□□ -1.4
CDC1	YDR182W	SEC15	P22224	910 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	GCG1	P32656	232 aa	Known RBP	6.28	□□□□□ -1.4
CDC1	YDR182W	FMP46	P36141	133 aa	Known RBP	6.28	□□□□□ -1.4
CDC1	YDR182W	MAD1	P40957	749 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	COG6	P53959	839 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	VTI1	Q04338	217 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	ENT2	Q05785	613 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	CDC123	Q05791	360 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	GRS2	Q06817	618 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	SYT1	Q06836	1226 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	FRE7	Q12333	620 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	HSH49	Q99181	213 aa	Predicted RBP	6.28	□□□□□ -1.4
CDC1	YDR182W	YAR066W	P0CX18	203 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	YHR214W	P0CX19	203 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	HRR25	P29295	494 aa	Known RBP	6.28	□□□□□ -1.4
CDC1	YDR182W	MGM101	P32787	269 aa	Known RBP	6.28	□□□□□ -1.4
CDC1	YDR182W	MKS1	P34072	584 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	REI1	P38344	393 aa	Predicted RBP	6.28	□□□□□ -1.4
CDC1	YDR182W	SOH1	P38633	127 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	YHR045W	P38775	560 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	YNL320W	P42840	284 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	YFR020W	P43600	232 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	PMT3	P47190	753 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	GCV1	P48015	400 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	ERG26	P53199	349 aa	Known RBP	6.28	□□□□□ -1.4
CDC1	YDR182W	TRS23	Q03784	219 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	RRP45	Q05636	305 aa	Known RBP	6.28	□□□□□ -1.4
CDC1	YDR182W	ADE13	Q05911	482 aa	Known RBP	6.28	□□□□□ -1.4
CDC1	YDR182W	YDR056C	Q12025	205 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	PST1	Q12355	444 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	ICT1	Q12385	394 aa		6.28	□□□□□ -1.4
CDC1	YDR182W	SEC53	P07283	254 aa	Known RBP	6.27	□□□□□ -1.41
CDC1	YDR182W	PRP16	P15938	1071 aa	Predicted RBP	6.27	□□□□□ -1.41
CDC1	YDR182W	PTP1	P25044	335 aa		6.27	□□□□□ -1.41
CDC1	YDR182W	NTH1	P32356	751 aa		6.27	□□□□□ -1.41
CDC1	YDR182W	TAF14	P35189	244 aa		6.27	□□□□□ -1.41
CDC1	YDR182W	THI80	P35202	319 aa		6.27	□□□□□ -1.41
CDC1	YDR182W	EFM1	P38732	585 aa		6.27	□□□□□ -1.41
CDC1	YDR182W	HSE1	P38753	452 aa		6.27	□□□□□ -1.41
CDC1	YDR182W	CCT4	P39078	528 aa	Known RBP	6.27	□□□□□ -1.41
CDC1	YDR182W	ALA1	P40825	983 aa	Known RBP	6.27	□□□□□ -1.41
CDC1	YDR182W	CCT8	P47079	568 aa	Known RBP	6.27	□□□□□ -1.41
CDC1	YDR182W	COS12	P53053	380 aa		6.27	□□□□□ -1.41
CDC1	YDR182W	UTP13	Q05946	817 aa	Known RBP	6.27	□□□□□ -1.41
CDC1	YDR182W	ISR1	Q06098	443 aa	Known RBP	6.27	□□□□□ -1.41
CDC1	YDR182W	CRN1	Q06440	651 aa		6.27	□□□□□ -1.41
CDC1	YDR182W	YLR030W	Q07967	263 aa		6.27	□□□□□ -1.41
CDC1	YDR182W	DIN7	Q12086	430 aa		6.27	□□□□□ -1.41
CDC1	YDR182W	CMR1	Q12510	522 aa	Known RBP	6.27	□□□□□ -1.41
CDC1	YDR182W	YLR111W	Q12528	110 aa		6.27	□□□□□ -1.41
CDC1	YDR182W	MDM35	O60200	86 aa		6.26	□□□□□ -1.41
CDC1	YDR182W	CDC21	P06785	304 aa		6.26	□□□□□ -1.41
CDC1	YDR182W	PEP12	P32854	288 aa		6.26	□□□□□ -1.41
CDC1	YDR182W	UBC6	P33296	250 aa	Predicted RBP	6.26	□□□□□ -1.41
CDC1	YDR182W	SOL2	P37262	315 aa		6.26	□□□□□ -1.41
CDC1	YDR182W	YHR127W	P38833	243 aa	Known RBP	6.26	□□□□□ -1.41
CDC1	YDR182W	SAE2	P46946	345 aa		6.26	□□□□□ -1.41
CDC1	YDR182W	PET130	P47065	347 aa		6.26	□□□□□ -1.41
CDC1	YDR182W	FHN1	P53279	174 aa		6.26	□□□□□ -1.41
CDC1	YDR182W	ESF2	P53743	316 aa	Known RBP	6.26	□□□□□ -1.41
CDC1	YDR182W	ATG23	Q06671	453 aa		6.26	□□□□□ -1.41
CDC1	YDR182W	KIN2	P13186	1147 aa	Known RBP	6.25	□□□□□ -1.41
CDC1	YDR182W	CMP2	P14747	604 aa		6.25	□□□□□ -1.41
CDC1	YDR182W	TYR1	P20049	452 aa		6.25	□□□□□ -1.41
CDC1	YDR182W	CLN2	P20438	545 aa		6.25	□□□□□ -1.41
CDC1	YDR182W	SEC14	P24280	304 aa	Known RBP	6.25	□□□□□ -1.41
CDC1	YDR182W	SFC1	P33303	322 aa		6.25	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms