RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W PHO87P25360 923 aa9.38□□□□□ -0.91
SED1YDR077W IMG2P25642 146 aaPredicted RBP9.38□□□□□ -0.91
SED1YDR077W ZIP1P31111 875 aa9.38□□□□□ -0.91
SED1YDR077W SIN4P32259 974 aa9.38□□□□□ -0.91
SED1YDR077W PTC1P35182 281 aa9.38□□□□□ -0.91
SED1YDR077W THI80P35202 319 aa9.38□□□□□ -0.91
SED1YDR077W TIM17P39515 158 aa9.38□□□□□ -0.91
SED1YDR077W OSW5P40219 148 aa9.38□□□□□ -0.91
SED1YDR077W FKH2P41813 862 aa9.38□□□□□ -0.91
SED1YDR077W COS4P43542 379 aa9.38□□□□□ -0.91
SED1YDR077W COG7P53195 279 aa9.38□□□□□ -0.91
SED1YDR077W NMA2P53204 395 aa9.38□□□□□ -0.91
SED1YDR077W GAS3Q03655 524 aa9.38□□□□□ -0.91
SED1YDR077W ACL4Q03771 387 aa9.38□□□□□ -0.91
SED1YDR077W GLO2Q05584 274 aa9.38□□□□□ -0.91
SED1YDR077W YEH2Q07950 538 aa9.38□□□□□ -0.91
SED1YDR077W CPA1P07258 411 aaKnown RBP9.37□□□□□ -0.91
SED1YDR077W RPS1AP33442 255 aaKnown RBP9.37□□□□□ -0.91
SED1YDR077W HES1P35843 434 aa9.37□□□□□ -0.91
SED1YDR077W YPT52P36018 234 aaKnown RBP9.37□□□□□ -0.91
SED1YDR077W YBL029WP38201 376 aa9.37□□□□□ -0.91
SED1YDR077W YER034WP40022 185 aaKnown RBP9.37□□□□□ -0.91
SED1YDR077W ARB1P40024 610 aaKnown RBP9.37□□□□□ -0.91
SED1YDR077W YEN1P40028 759 aa9.37□□□□□ -0.91
SED1YDR077W YFR018CP43599 363 aa9.37□□□□□ -0.91
SED1YDR077W SET2P46995 733 aaKnown RBP9.37□□□□□ -0.91
SED1YDR077W IMA1P53051 589 aa9.37□□□□□ -0.91
SED1YDR077W ERP6P53198 216 aa9.37□□□□□ -0.91
SED1YDR077W YGR053CP53234 283 aa9.37□□□□□ -0.91
SED1YDR077W TRM12Q04235 462 aa9.37□□□□□ -0.91
SED1YDR077W HFD1Q04458 532 aa9.37□□□□□ -0.91
SED1YDR077W BCH1Q05029 724 aa9.37□□□□□ -0.91
SED1YDR077W SMF3Q12078 473 aaPredicted RBP9.37□□□□□ -0.91
SED1YDR077W AIR2Q12476 344 aaKnown RBP9.37□□□□□ -0.91
SED1YDR077W TY4A-HQ6Q5P6 413 aa9.37□□□□□ -0.91
SED1YDR077W MPD2Q99316 277 aa9.37□□□□□ -0.91
SED1YDR077W RPS9AO13516 197 aaKnown RBP9.36□□□□□ -0.91
SED1YDR077W RPL24AP04449 155 aaKnown RBP9.36□□□□□ -0.91
SED1YDR077W MSF1P08425 469 aa9.36□□□□□ -0.91
SED1YDR077W GUK1P15454 187 aaKnown RBP9.36□□□□□ -0.91
SED1YDR077W EPT1P22140 391 aa9.36□□□□□ -0.91
SED1YDR077W LRG1P35688 1017 aa9.36□□□□□ -0.91
SED1YDR077W HSE1P38753 452 aa9.36□□□□□ -0.91
SED1YDR077W SSN3P39073 555 aa9.36□□□□□ -0.91
SED1YDR077W SER33P40510 469 aa9.36□□□□□ -0.91
SED1YDR077W IAH1P41734 238 aa9.36□□□□□ -0.91
SED1YDR077W RMD8P43620 662 aa9.36□□□□□ -0.91
SED1YDR077W TIS11P47977 285 aa9.36□□□□□ -0.91
SED1YDR077W MTR3P48240 250 aaPredicted RBP9.36□□□□□ -0.91
SED1YDR077W RSC3Q06639 885 aa9.36□□□□□ -0.91
SED1YDR077W UAF30Q08747 228 aa9.36□□□□□ -0.91
SED1YDR077W MCH5Q08777 521 aa9.36□□□□□ -0.91
SED1YDR077W HUA2Q12134 243 aa9.36□□□□□ -0.91
SED1YDR077W NSL1Q12143 216 aa9.36□□□□□ -0.91
SED1YDR077W YAR066WP0CX18 203 aa9.35□□□□□ -0.91
SED1YDR077W YHR214WP0CX19 203 aa9.35□□□□□ -0.91
SED1YDR077W FUS1P11710 512 aa9.35□□□□□ -0.91
SED1YDR077W FPR1P20081 114 aaKnown RBP9.35□□□□□ -0.91
SED1YDR077W SAN1P22470 610 aa9.35□□□□□ -0.91
SED1YDR077W CRM1P30822 1084 aaKnown RBP9.35□□□□□ -0.91
SED1YDR077W PMT1P33775 817 aa9.35□□□□□ -0.91
SED1YDR077W DCW1P36091 449 aa9.35□□□□□ -0.91
SED1YDR077W YHR020WP38708 688 aaKnown RBP9.35□□□□□ -0.91
SED1YDR077W NPT1P39683 429 aaKnown RBP9.35□□□□□ -0.91
SED1YDR077W UTP18P40362 594 aaPredicted RBP9.35□□□□□ -0.91
SED1YDR077W MET18P40469 1032 aa9.35□□□□□ -0.91
SED1YDR077W MAM33P40513 266 aa9.35□□□□□ -0.91
SED1YDR077W GCD10P41814 478 aa9.35□□□□□ -0.91
SED1YDR077W YGL108CP53139 140 aa9.35□□□□□ -0.91
SED1YDR077W PRO2P54885 456 aaKnown RBP9.35□□□□□ -0.91
SED1YDR077W DYN3Q04949 312 aa9.35□□□□□ -0.91
SED1YDR077W GGA1Q06336 557 aa9.35□□□□□ -0.91
SED1YDR077W CDA1Q06702 301 aa9.35□□□□□ -0.91
SED1YDR077W SGT1Q08446 395 aa9.35□□□□□ -0.91
SED1YDR077W GPB1Q08886 897 aa9.35□□□□□ -0.91
SED1YDR077W TPK2P06245 380 aa9.34□□□□□ -0.91
SED1YDR077W HIS5P07172 385 aa9.34□□□□□ -0.91
SED1YDR077W PUP3P25451 205 aaKnown RBP9.34□□□□□ -0.91
SED1YDR077W CSM1P25651 190 aa9.34□□□□□ -0.91
SED1YDR077W PHO91P27514 894 aa9.34□□□□□ -0.91
SED1YDR077W ATP7P30902 174 aa9.34□□□□□ -0.91
SED1YDR077W CCR4P31384 837 aaKnown RBP9.34□□□□□ -0.91
SED1YDR077W RPF2P36160 344 aaKnown RBP9.34□□□□□ -0.91
SED1YDR077W IML3P38265 245 aa9.34□□□□□ -0.91
SED1YDR077W CYC2P38909 366 aa9.34□□□□□ -0.91
SED1YDR077W EMP65P40085 556 aa9.34□□□□□ -0.91
SED1YDR077W DIM1P41819 318 aaKnown RBP9.34□□□□□ -0.91
SED1YDR077W MDJ2P42834 146 aa9.34□□□□□ -0.91
SED1YDR077W GAT1P43574 510 aa9.34□□□□□ -0.91
SED1YDR077W NAS6P50086 228 aa9.34□□□□□ -0.91
SED1YDR077W PRP38Q00723 242 aaPredicted RBP9.34□□□□□ -0.91
SED1YDR077W ATP25Q03153 612 aa9.34□□□□□ -0.91
SED1YDR077W ARX1Q03862 593 aaKnown RBP9.34□□□□□ -0.91
SED1YDR077W YLR413WQ06689 675 aa9.34□□□□□ -0.91
SED1YDR077W SUC2P00724 532 aa9.33□□□□□ -0.92
SED1YDR077W RPS14AP06367 137 aaKnown RBP9.33□□□□□ -0.92
SED1YDR077W CDC21P06785 304 aa9.33□□□□□ -0.92
SED1YDR077W SPT3P06844 337 aa9.33□□□□□ -0.92
SED1YDR077W GUT1P32190 709 aa9.33□□□□□ -0.92
SED1YDR077W CSE1P33307 960 aa9.33□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms