RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C FAT1P38225 669 aa6.18□□□□□ -1.42
CDC34YDR054C TSL1P38427 1098 aaKnown RBP6.18□□□□□ -1.42
CDC34YDR054C LRP1P38801 184 aaKnown RBP6.18□□□□□ -1.42
CDC34YDR054C UME6P39001 836 aa6.18□□□□□ -1.42
CDC34YDR054C BTT1P40314 149 aaPredicted RBP6.18□□□□□ -1.42
CDC34YDR054C RLP7P40693 322 aaKnown RBP6.18□□□□□ -1.42
CDC34YDR054C UFE1P41834 346 aa6.18□□□□□ -1.42
CDC34YDR054C SHR5P41912 237 aa6.18□□□□□ -1.42
CDC34YDR054C RTT101P47050 842 aa6.18□□□□□ -1.42
CDC34YDR054C GCV1P48015 400 aa6.18□□□□□ -1.42
CDC34YDR054C ASN2P49090 572 aaKnown RBP6.18□□□□□ -1.42
CDC34YDR054C KTR5P53966 522 aaPredicted RBP6.18□□□□□ -1.42
CDC34YDR054C INP2Q03824 705 aa6.18□□□□□ -1.42
CDC34YDR054C YDL073WQ07454 984 aa6.18□□□□□ -1.42
CDC34YDR054C AVO1Q08236 1176 aa6.18□□□□□ -1.42
CDC34YDR054C AAD15Q08361 143 aa6.18□□□□□ -1.42
CDC34YDR054C VHS3Q08438 674 aa6.18□□□□□ -1.42
CDC34YDR054C OCA6Q12454 224 aa6.18□□□□□ -1.42
CDC34YDR054C AFI1Q99222 893 aa6.18□□□□□ -1.42
CDC34YDR054C COX5AP00424 153 aa6.17□□□□□ -1.42
CDC34YDR054C RED1P14291 827 aa6.17□□□□□ -1.42
CDC34YDR054C APE1P14904 514 aa6.17□□□□□ -1.42
CDC34YDR054C GUK1P15454 187 aaKnown RBP6.17□□□□□ -1.42
CDC34YDR054C MRPL25P23369 157 aa6.17□□□□□ -1.42
CDC34YDR054C PPH22P23595 377 aa6.17□□□□□ -1.42
CDC34YDR054C YCR051WP25631 222 aa6.17□□□□□ -1.42
CDC34YDR054C NPL6P32832 435 aa6.17□□□□□ -1.42
CDC34YDR054C KAP104P38217 918 aaKnown RBP6.17□□□□□ -1.42
CDC34YDR054C SPC97P38863 823 aa6.17□□□□□ -1.42
CDC34YDR054C POP2P39008 433 aa6.17□□□□□ -1.42
CDC34YDR054C AXL1P40851 1208 aa6.17□□□□□ -1.42
CDC34YDR054C NUP85P46673 744 aa6.17□□□□□ -1.42
CDC34YDR054C YJL132WP47014 750 aa6.17□□□□□ -1.42
CDC34YDR054C MAD3P47074 515 aa6.17□□□□□ -1.42
CDC34YDR054C HXT16P47185 567 aa6.17□□□□□ -1.42
CDC34YDR054C COP1P53622 1201 aaKnown RBP6.17□□□□□ -1.42
CDC34YDR054C BUD22Q04347 519 aaKnown RBP6.17□□□□□ -1.42
CDC34YDR054C YDR286CQ05530 114 aa6.17□□□□□ -1.42
CDC34YDR054C GRX8Q05926 109 aa6.17□□□□□ -1.42
CDC34YDR054C YET3Q07451 203 aa6.17□□□□□ -1.42
CDC34YDR054C CUE5Q08412 411 aaKnown RBP6.17□□□□□ -1.42
CDC34YDR054C SLD7Q08457 257 aa6.17□□□□□ -1.42
CDC34YDR054C MCH5Q08777 521 aa6.17□□□□□ -1.42
CDC34YDR054C LDB17Q12342 491 aa6.17□□□□□ -1.42
CDC34YDR054C SSC1P0CS90 654 aaKnown RBP6.16□□□□□ -1.42
CDC34YDR054C MTF1P14908 341 aaKnown RBP6.16□□□□□ -1.42
CDC34YDR054C SRV2P17555 526 aaKnown RBP6.16□□□□□ -1.42
CDC34YDR054C PEX34P25584 144 aa6.16□□□□□ -1.42
CDC34YDR054C URA10P30402 227 aa6.16□□□□□ -1.42
CDC34YDR054C ETR1P38071 380 aa6.16□□□□□ -1.42
CDC34YDR054C TPA1P40032 644 aaKnown RBP6.16□□□□□ -1.42
CDC34YDR054C YIL161WP40449 235 aaKnown RBP6.16□□□□□ -1.42
CDC34YDR054C ROK1P45818 564 aaPredicted RBP6.16□□□□□ -1.42
CDC34YDR054C SET2P46995 733 aaKnown RBP6.16□□□□□ -1.42
CDC34YDR054C PRP24P49960 444 aaKnown RBP6.16□□□□□ -1.42
CDC34YDR054C PSP1P50896 841 aaKnown RBP6.16□□□□□ -1.42
CDC34YDR054C BIO4P53630 237 aa6.16□□□□□ -1.42
CDC34YDR054C ENT5Q03769 411 aaKnown RBP6.16□□□□□ -1.42
CDC34YDR054C FAR8Q05040 523 aa6.16□□□□□ -1.42
CDC34YDR054C PGC1Q08959 321 aa6.16□□□□□ -1.42
CDC34YDR054C SPE3Q12074 293 aaKnown RBP6.16□□□□□ -1.42
CDC34YDR054C HSP42Q12329 375 aa6.16□□□□□ -1.42
CDC34YDR054C NCA2Q12374 616 aa6.16□□□□□ -1.42
CDC34YDR054C PHO5P00635 467 aa6.15□□□□□ -1.42
CDC34YDR054C FUM1P08417 488 aaKnown RBP6.15□□□□□ -1.42
CDC34YDR054C ERG20P08524 352 aaKnown RBP6.15□□□□□ -1.42
CDC34YDR054C HMG2P12684 1045 aa6.15□□□□□ -1.42
CDC34YDR054C PDX1P16451 410 aa6.15□□□□□ -1.42
CDC34YDR054C RFA1P22336 621 aaKnown RBP6.15□□□□□ -1.42
CDC34YDR054C YCL068CP25593 260 aa6.15□□□□□ -1.42
CDC34YDR054C ORC2P32833 620 aa6.15□□□□□ -1.42
CDC34YDR054C YKL151CP36059 337 aa6.15□□□□□ -1.42
CDC34YDR054C MRPL36P36531 177 aa6.15□□□□□ -1.42
CDC34YDR054C GDT1P38301 280 aaPredicted RBP6.15□□□□□ -1.42
CDC34YDR054C SAF1P38352 637 aa6.15□□□□□ -1.42
CDC34YDR054C SRP68P38687 599 aaKnown RBP6.15□□□□□ -1.42
CDC34YDR054C YER010CP40011 234 aa6.15□□□□□ -1.42
CDC34YDR054C SCS2P40075 244 aaKnown RBP6.15□□□□□ -1.42
CDC34YDR054C PUG1P40100 303 aa6.15□□□□□ -1.42
CDC34YDR054C ELO3P40319 345 aa6.15□□□□□ -1.42
CDC34YDR054C YIL166CP40445 542 aa6.15□□□□□ -1.42
CDC34YDR054C DSN1P40568 576 aa6.15□□□□□ -1.42
CDC34YDR054C ARF3P40994 183 aaRIP-Chip data6.15□□□□□ -1.42not detected
CDC34YDR054C PXA1P41909 870 aa6.15□□□□□ -1.42
CDC34YDR054C LEM3P42838 414 aa6.15□□□□□ -1.42
CDC34YDR054C BST1P43571 1029 aa6.15□□□□□ -1.42
CDC34YDR054C DLD2P46681 530 aaKnown RBP6.15□□□□□ -1.42
CDC34YDR054C TRS85P46944 698 aa6.15□□□□□ -1.42
CDC34YDR054C MRX6P48564 524 aa6.15□□□□□ -1.42
CDC34YDR054C PUS4P48567 403 aaKnown RBP6.15□□□□□ -1.42
CDC34YDR054C REG1Q00816 1014 aa6.15□□□□□ -1.42
CDC34YDR054C MRS2Q01926 470 aa6.15□□□□□ -1.42
CDC34YDR054C RNY1Q02933 434 aaKnown RBP6.15□□□□□ -1.42
CDC34YDR054C EAR1Q03212 550 aa6.15□□□□□ -1.42
CDC34YDR054C MFB1Q04922 465 aa6.15□□□□□ -1.42
CDC34YDR054C CRR1Q05790 422 aa6.15□□□□□ -1.42
CDC34YDR054C YLL054CQ12244 843 aa6.15□□□□□ -1.42
CDC34YDR054C YDR034W-BQ6Q5X2 51 aa6.15□□□□□ -1.42
CDC34YDR054C YMR085WP0CF18 432 aa6.14□□□□□ -1.43
CDC34YDR054C NDI1P32340 513 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms