RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeastyeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPO21YDL140C SNP1Q00916 300 aaPredicted RBP3.76□□□□□ -1.81
RPO21YDL140C CEG1Q01159 459 aaPredicted RBP3.76□□□□□ -1.81
RPO21YDL140C TUB3P09734 445 aaKnown RBP3.76□□□□□ -1.81
RPO21YDL140C YHR214C-DP0CX93 97 aa3.76□□□□□ -1.81
RPO21YDL140C VAN1P23642 535 aa3.76□□□□□ -1.81
RPO21YDL140C SPS19P32573 292 aaKnown RBP3.76□□□□□ -1.81
RPO21YDL140C DUG2P38149 878 aa3.76□□□□□ -1.81
RPO21YDL140C HSL7P38274 827 aa3.76□□□□□ -1.81
RPO21YDL140C YLF2P38746 405 aa3.76□□□□□ -1.81
RPO21YDL140C YEL028WP39989 153 aa3.76□□□□□ -1.81
RPO21YDL140C UTP18P40362 594 aaPredicted RBP3.76□□□□□ -1.81
RPO21YDL140C MPS3P47069 682 aa3.76□□□□□ -1.81
RPO21YDL140C BRO1P48582 844 aa3.76□□□□□ -1.81
RPO21YDL140C MON1P53129 644 aa3.76□□□□□ -1.81
RPO21YDL140C VPS73P53142 486 aaKnown RBP3.76□□□□□ -1.81
RPO21YDL140C PRP11Q07350 266 aaPredicted RBP3.76□□□□□ -1.81
RPO21YDL140C RTT10Q08924 1013 aa3.76□□□□□ -1.81
RPO21YDL140C WTM2Q12206 467 aa3.76□□□□□ -1.81
RPO21YDL140C WSC3Q12215 556 aa3.76□□□□□ -1.81
RPO21YDL140C ARF2P19146 181 aaKnown RBP3.76□□□□□ -1.81
RPO21YDL140C URA10P30402 227 aa3.76□□□□□ -1.81
RPO21YDL140C PEP7P32609 515 aa3.76□□□□□ -1.81
RPO21YDL140C PEP12P32854 288 aa3.76□□□□□ -1.81
RPO21YDL140C LOS1P33418 1100 aaPredicted RBP3.76□□□□□ -1.81
RPO21YDL140C DSS1P39112 969 aa3.76□□□□□ -1.81
RPO21YDL140C ORC5P50874 479 aa3.76□□□□□ -1.81
RPO21YDL140C STR3P53101 465 aaKnown RBP3.76□□□□□ -1.81
RPO21YDL140C TWF1P53250 332 aa3.76□□□□□ -1.81
RPO21YDL140C YDR249CQ03787 373 aa3.76□□□□□ -1.81
RPO21YDL140C ATG16Q03818 150 aa3.76□□□□□ -1.81
RPO21YDL140C RAD34Q06665 692 aa3.76□□□□□ -1.81
RPO21YDL140C YBR085C-AO43137 85 aa3.75□□□□□ -1.81
RPO21YDL140C LEU4P06208 619 aaKnown RBP3.75□□□□□ -1.81
RPO21YDL140C BUD5P25300 642 aaPredicted RBP3.75□□□□□ -1.81
RPO21YDL140C YPT7P32939 208 aa3.75□□□□□ -1.81
RPO21YDL140C PDR3P33200 976 aa3.75□□□□□ -1.81
RPO21YDL140C TMA19P35691 167 aaKnown RBP3.75□□□□□ -1.81
RPO21YDL140C UBS1P38290 277 aa3.75□□□□□ -1.81
RPO21YDL140C EXO1P39875 702 aa3.75□□□□□ -1.81
RPO21YDL140C YIL054WP40524 105 aa3.75□□□□□ -1.81
RPO21YDL140C IST3P40565 148 aaPredicted RBP3.75□□□□□ -1.81
RPO21YDL140C YGR079WP53249 370 aa3.75□□□□□ -1.81
RPO21YDL140C YGR122WP53272 402 aa3.75□□□□□ -1.81
RPO21YDL140C WHI4Q07655 649 aaKnown RBP3.75□□□□□ -1.81
RPO21YDL140C CAP1P28495 268 aaKnown RBP3.75□□□□□ -1.81
RPO21YDL140C ITR1P30605 584 aa3.75□□□□□ -1.81
RPO21YDL140C IME2P32581 645 aa3.75□□□□□ -1.81
RPO21YDL140C DHR2P36009 735 aaPredicted RBP3.75□□□□□ -1.81
RPO21YDL140C RIX1P38883 763 aaPredicted RBP3.75□□□□□ -1.81
RPO21YDL140C KAP120Q02932 1032 aa3.75□□□□□ -1.81
RPO21YDL140C FAP7Q12055 197 aaPredicted RBP3.75□□□□□ -1.81
RPO21YDL140C AFI1Q99222 893 aa3.75□□□□□ -1.81
RPO21YDL140C TAO3P40468 2376 aa3.75□□□□□ -1.81
RPO21YDL140C NTE1Q04958 1679 aa3.75□□□□□ -1.81
RPO21YDL140C KIN28P06242 306 aa3.75□□□□□ -1.81
RPO21YDL140C CNA1P23287 553 aa3.75□□□□□ -1.81
RPO21YDL140C RRP1P35178 278 aaPredicted RBP3.75□□□□□ -1.81
RPO21YDL140C MAE1P36013 669 aaKnown RBP3.75□□□□□ -1.81
RPO21YDL140C YMC2P38087 329 aa3.75□□□□□ -1.81
RPO21YDL140C EXO5P38289 585 aa3.75□□□□□ -1.81
RPO21YDL140C DED81P38707 554 aaKnown RBP3.75□□□□□ -1.81
RPO21YDL140C BIG1P38813 335 aa3.75□□□□□ -1.81
RPO21YDL140C ACO2P39533 789 aa3.75□□□□□ -1.81
RPO21YDL140C KHA1P40309 873 aa3.75□□□□□ -1.81
RPO21YDL140C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
RPO21YDL140C YGR066CP53242 292 aa3.75□□□□□ -1.81
RPO21YDL140C SKG3Q06315 1026 aa3.75□□□□□ -1.81
RPO21YDL140C RRP40Q08285 240 aaKnown RBP3.75□□□□□ -1.81
RPO21YDL140C IES4Q08561 116 aa3.75□□□□□ -1.81
RPO21YDL140C TRM8Q12009 286 aa3.75□□□□□ -1.81
RPO21YDL140C PDC5P16467 563 aaKnown RBP3.75□□□□□ -1.81
RPO21YDL140C MET16P18408 261 aaPredicted RBP3.75□□□□□ -1.81
RPO21YDL140C SEC15P22224 910 aa3.75□□□□□ -1.81
RPO21YDL140C ARO7P32178 256 aa3.75□□□□□ -1.81
RPO21YDL140C OMA1P36163 345 aa3.75□□□□□ -1.81
RPO21YDL140C TDP1P38319 544 aa3.75□□□□□ -1.81
RPO21YDL140C SLM1P40485 686 aa3.75□□□□□ -1.81
RPO21YDL140C MPH1P40562 993 aa3.75□□□□□ -1.81
RPO21YDL140C EEB1Q02891 456 aa3.75□□□□□ -1.81
RPO21YDL140C VPS38Q05919 439 aa3.75□□□□□ -1.81
RPO21YDL140C SAM3Q08986 587 aa3.75□□□□□ -1.81
RPO21YDL140C GEP5Q12393 293 aa3.75□□□□□ -1.81
RPO21YDL140C HOM3P10869 527 aa3.74□□□□□ -1.81
RPO21YDL140C MYO3P36006 1272 aa3.74□□□□□ -1.81
RPO21YDL140C YHR131CP38835 850 aa3.74□□□□□ -1.81
RPO21YDL140C OAF1P39720 1047 aaPredicted RBP3.74□□□□□ -1.81
RPO21YDL140C DOT6P40059 670 aaKnown RBP3.74□□□□□ -1.81
RPO21YDL140C MET28P40573 187 aa3.74□□□□□ -1.81
RPO21YDL140C AQR1P53943 586 aa3.74□□□□□ -1.81
RPO21YDL140C RPN4Q03465 531 aa3.74□□□□□ -1.81
RPO21YDL140C SNU56Q03782 492 aaKnown RBP3.74□□□□□ -1.81
RPO21YDL140C BSC2Q05611 235 aa3.74□□□□□ -1.81
RPO21YDL140C PFK27Q12471 397 aaPredicted RBP3.74□□□□□ -1.81
RPO21YDL140C MGR1P25573 417 aa3.74□□□□□ -1.81
RPO21YDL140C PIG2P40187 538 aa3.74□□□□□ -1.81
RPO21YDL140C SWM2P40342 146 aa3.74□□□□□ -1.81
RPO21YDL140C ULI1P43604 169 aa3.74□□□□□ -1.81
RPO21YDL140C ACF2Q12168 779 aa3.74□□□□□ -1.81
RPO21YDL140C YOR022CQ12204 715 aa3.74□□□□□ -1.81
RPO21YDL140C USB1Q12208 290 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms