RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W CSI1Q04368 295 aa5.75□□□□□ -1.49
SUB2YDL084W MRPL1Q04599 285 aa5.75□□□□□ -1.49
SUB2YDL084W PNP1Q05788 311 aa5.75□□□□□ -1.49
SUB2YDL084W YPR127WQ06494 345 aa5.75□□□□□ -1.49
SUB2YDL084W MHR1Q06630 226 aa5.75□□□□□ -1.49
SUB2YDL084W YLR001CQ07895 862 aa5.75□□□□□ -1.49
SUB2YDL084W PML1Q07930 204 aaPredicted RBP5.75□□□□□ -1.49
SUB2YDL084W TCO89Q08921 799 aa5.75□□□□□ -1.49
SUB2YDL084W GUP2Q08929 609 aa5.75□□□□□ -1.49
SUB2YDL084W VAM3Q12241 283 aa5.75□□□□□ -1.49
SUB2YDL084W YDL206WQ12424 762 aa5.75□□□□□ -1.49
SUB2YDL084W MRPL23Q12487 163 aaPredicted RBP5.75□□□□□ -1.49
SUB2YDL084W ISN1Q99312 450 aa5.75□□□□□ -1.49
SUB2YDL084W Q0144Q9ZZW2 109 aa5.75□□□□□ -1.49
SUB2YDL084W SIN3P22579 1536 aa5.75□□□□□ -1.49
SUB2YDL084W COQ4O13525 335 aa5.74□□□□□ -1.49
SUB2YDL084W RPP1AP05318 106 aaPredicted RBP5.74□□□□□ -1.49
SUB2YDL084W MET17P06106 444 aa5.74□□□□□ -1.49
SUB2YDL084W RAD18P10862 487 aa5.74□□□□□ -1.49
SUB2YDL084W NHP6AP11632 93 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W GAL2P13181 574 aa5.74□□□□□ -1.49
SUB2YDL084W CBS1P14066 229 aa5.74□□□□□ -1.49
SUB2YDL084W PDC5P16467 563 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W AMD2P22580 549 aa5.74□□□□□ -1.49
SUB2YDL084W AAT2P23542 418 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W CPR4P25334 318 aa5.74□□□□□ -1.49
SUB2YDL084W SNT1P25357 1226 aa5.74□□□□□ -1.49
SUB2YDL084W AGP1P25376 633 aa5.74□□□□□ -1.49
SUB2YDL084W RHB1P25378 209 aa5.74□□□□□ -1.49
SUB2YDL084W IMG2P25642 146 aaPredicted RBP5.74□□□□□ -1.49
SUB2YDL084W ADK2P26364 225 aa5.74□□□□□ -1.49
SUB2YDL084W IDH1P28834 360 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
SUB2YDL084W SUV3P32580 737 aa5.74□□□□□ -1.49
SUB2YDL084W SLC1P33333 303 aa5.74□□□□□ -1.49
SUB2YDL084W PGM1P33401 570 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W KTR2P33550 425 aa5.74□□□□□ -1.49
SUB2YDL084W SPO23P33757 523 aa5.74□□□□□ -1.49
SUB2YDL084W YOX1P34161 385 aa5.74□□□□□ -1.49
SUB2YDL084W ASH1P34233 588 aa5.74□□□□□ -1.49
SUB2YDL084W RCN1P36054 211 aa5.74□□□□□ -1.49
SUB2YDL084W ALY1P36117 915 aa5.74□□□□□ -1.49
SUB2YDL084W TDA11P38854 504 aa5.74□□□□□ -1.49
SUB2YDL084W RPN3P40016 523 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W RGI2P40188 164 aa5.74□□□□□ -1.49
SUB2YDL084W PDS1P40316 373 aaPredicted RBP5.74□□□□□ -1.49
SUB2YDL084W KTR7P40504 517 aa5.74□□□□□ -1.49
SUB2YDL084W THI6P41835 540 aa5.74□□□□□ -1.49
SUB2YDL084W EMC2P47133 292 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W NAS6P50086 228 aa5.74□□□□□ -1.49
SUB2YDL084W CUL3P53202 744 aa5.74□□□□□ -1.49
SUB2YDL084W SLI1P53304 468 aa5.74□□□□□ -1.49
SUB2YDL084W NOP13P53883 403 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
SUB2YDL084W CTF19Q02732 369 aa5.74□□□□□ -1.49
SUB2YDL084W YDC1Q02896 317 aa5.74□□□□□ -1.49
SUB2YDL084W NGL3Q03210 505 aa5.74□□□□□ -1.49
SUB2YDL084W YDR248CQ03786 193 aa5.74□□□□□ -1.49
SUB2YDL084W YLR297WQ05899 129 aa5.74□□□□□ -1.49
SUB2YDL084W TAF10Q12030 206 aa5.74□□□□□ -1.49
SUB2YDL084W MET32Q12041 191 aa5.74□□□□□ -1.49
SUB2YDL084W HAL9Q12180 1030 aa5.74□□□□□ -1.49
SUB2YDL084W RPN6Q12377 434 aa5.74□□□□□ -1.49
SUB2YDL084W REV3P14284 1504 aa5.74□□□□□ -1.49
SUB2YDL084W RPS17AP02407 136 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W TPK1P06244 397 aa5.74□□□□□ -1.49
SUB2YDL084W PHO4P07270 312 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W MOD5P07884 428 aa5.74□□□□□ -1.49
SUB2YDL084W RPL35AP0CX84 120 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W RPL35BP0CX85 120 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W MATALPHA1P0CY06 175 aa5.74□□□□□ -1.49
SUB2YDL084W HMLALPHA1P0CY07 175 aa5.74□□□□□ -1.49
SUB2YDL084W RPS17BP14127 136 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W ATP12P22135 325 aa5.74□□□□□ -1.49
SUB2YDL084W YCK2P23292 546 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W KIP1P28742 1111 aa5.74□□□□□ -1.49
SUB2YDL084W PRE4P30657 266 aa5.74□□□□□ -1.49
SUB2YDL084W MLS1P30952 554 aa5.74□□□□□ -1.49
SUB2YDL084W MSS1P32559 526 aaPredicted RBP5.74□□□□□ -1.49
SUB2YDL084W SSE2P32590 693 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W GSP1P32835 219 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W GSP2P32836 220 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W GIP1P38229 639 aa5.74□□□□□ -1.49
SUB2YDL084W AME1P38313 324 aa5.74□□□□□ -1.49
SUB2YDL084W GRE3P38715 327 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
SUB2YDL084W QNS1P38795 714 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W YNG2P38806 282 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W YHR097CP38809 366 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W NPR2P39923 615 aa5.74□□□□□ -1.49
SUB2YDL084W PAC1P39946 494 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W DLD3P39976 496 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W RGI1P40043 161 aaPredicted RBP5.74□□□□□ -1.49
SUB2YDL084W SCS2P40075 244 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W ERG10P41338 398 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W QRI7P43122 407 aa5.74□□□□□ -1.49
SUB2YDL084W AGP3P43548 558 aa5.74□□□□□ -1.49
SUB2YDL084W SEH1P53011 349 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W TAF6P53040 516 aa5.74□□□□□ -1.49
SUB2YDL084W SGF73P53165 657 aa5.74□□□□□ -1.49
SUB2YDL084W DRN1P53255 507 aaKnown RBP5.74□□□□□ -1.49
SUB2YDL084W YSA1Q01976 231 aa5.74□□□□□ -1.49
SUB2YDL084W RPL6AQ02326 176 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms