RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUP1	YCR084C	DAD2	P36162	133 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	PCM1	P38628	557 aa	Known RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	NPT1	P39683	429 aa	Known RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	HXT10	P43581	546 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	ALK1	P43633	760 aa	Known RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	YJR096W	P47137	282 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	MRK1	P50873	501 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	MET13	P53128	600 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	SLI1	P53304	468 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	HDA1	P53973	706 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	ACL4	Q03771	387 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	BUD22	Q04347	519 aa	Known RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	COA4	Q05809	96 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	EST2	Q06163	884 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	YLR173W	Q06247	608 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	GRX6	Q12438	231 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	PFK27	Q12471	397 aa	Predicted RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	NBL1	Q3E7Y6	73 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	MTR10	Q99189	972 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	CBP2	P03874	630 aa	Predicted RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	RAD7	P06779	565 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	CLN3	P13365	580 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	FRS1	P15624	595 aa	Known RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	POL30	P15873	258 aa	Known RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	PFK1	P16861	987 aa	Known RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	ARG8	P18544	423 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	KGD1	P20967	1014 aa	Known RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	CHL1	P22516	861 aa	Predicted RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	SPO23	P33757	523 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	MNN2	P38069	597 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	MUP3	P38734	546 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	PTC2	P39966	464 aa	Known RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	VMA13	P41807	478 aa	Known RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	YFL034W	P43564	1073 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	ULI1	P43604	169 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	NMD5	P46970	1048 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	LSM1	P47017	172 aa	Known RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	UTP8	P53276	713 aa	Known RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	DIG1	Q03063	452 aa	Known RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	PEX29	Q03370	554 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	YLR413W	Q06689	675 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	WHI4	Q07655	649 aa	Known RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	DIA2	Q08496	732 aa	Predicted RBP	5.03	□□□□□ -1.6
TUP1	YCR084C	INP53	Q12271	1107 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	TRM11	Q12463	433 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	PTC5	Q12511	572 aa		5.03	□□□□□ -1.6
TUP1	YCR084C	SIR3	P06701	978 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	YCK2	P23292	546 aa	Known RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	SWI4	P25302	1093 aa	Known RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	BOS1	P25385	244 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	GID7	P25569	745 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	HSP30	P25619	332 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	PCL2	P25693	308 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	ADE1	P27616	306 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	MF(ALPHA)2	P32435	120 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	ARO4	P32449	370 aa	Known RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	SEC61	P32915	480 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	RCN1	P36054	211 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	FHL1	P39521	936 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	RGI2	P40188	164 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	YMR147W	P40218	223 aa	Known RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	IRC24	P40580	263 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	YJR054W	P47114	497 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	CNM67	P53865	581 aa	Known RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	YNL134C	P53912	376 aa	Known RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	DIA1	P54005	336 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	MAK10	Q02197	733 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	RAD30	Q04049	632 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	TCO89	Q08921	799 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	DDC1	Q08949	612 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	HFI1	Q12060	488 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	YPR022C	Q12139	1133 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	ARP7	Q12406	477 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	MRPL23	Q12487	163 aa	Predicted RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	SSA3	P09435	649 aa	Known RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	GSY1	P23337	708 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	PRE9	P23638	258 aa	Known RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	YCR101C	P25607	182 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	PAT1	P25644	796 aa	Known RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	CRM1	P30822	1084 aa	Known RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	VMA6	P32366	345 aa	Known RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	NGG1	P32494	702 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	KAP122	P32767	1081 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	SPT10	P35208	640 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	HES1	P35843	434 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	BIT2	P38346	545 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	ORC6	P38826	435 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	YER010C	P40011	234 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	UTP25	P40498	721 aa	Known RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	YFL052W	P43551	465 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	SWP82	P43554	623 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	ALT2	P52892	507 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	MRM2	P53123	320 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	DRN1	P53255	507 aa	Known RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	SLU7	Q02775	382 aa	Known RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	SKI8	Q02793	397 aa	Predicted RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	GTO3	Q04806	366 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	YPR147C	Q06522	304 aa	Known RBP	5.02	□□□□□ -1.61
TUP1	YCR084C	AIM41	Q12032	185 aa		5.02	□□□□□ -1.61
TUP1	YCR084C	MDM20	Q12387	796 aa	Known RBP	5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 145.2 ms