RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	MUD2	P36084	527 aa	Known RBP	3.48	□□□□□ -1.85
CMD1	YBR109C	FLO10	P36170	1169 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	YMR124W	P39523	943 aa	Known RBP	3.48	□□□□□ -1.85
CMD1	YBR109C	FMP10	P40098	244 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	RIO2	P40160	425 aa	Known RBP	3.48	□□□□□ -1.85
CMD1	YBR109C	SAE2	P46946	345 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	UBX6	P47049	396 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	COS5	P47187	383 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	MSY1	P48527	492 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	VPS4	P52917	437 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	AAT1	Q01802	451 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	VTC3	Q02725	835 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	SYF1	Q04048	859 aa	Predicted RBP	3.48	□□□□□ -1.85
CMD1	YBR109C	RRB1	Q04225	511 aa	Known RBP	3.48	□□□□□ -1.85
CMD1	YBR109C	YDR341C	Q05506	607 aa	Known RBP	3.48	□□□□□ -1.85
CMD1	YBR109C	RAD34	Q06665	692 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	TSR1	Q07381	788 aa	Known RBP	3.48	□□□□□ -1.85
CMD1	YBR109C	TLG2	Q08144	397 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	APL5	Q08951	932 aa	Known RBP	3.48	□□□□□ -1.85
CMD1	YBR109C	BAG7	Q12128	409 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	RIO1	Q12196	484 aa	Known RBP	3.48	□□□□□ -1.85
CMD1	YBR109C	TUB1	P09733	447 aa	Known RBP	3.47	□□□□□ -1.85
CMD1	YBR109C	CKA2	P19454	339 aa		3.47	□□□□□ -1.85
CMD1	YBR109C	RPC53	P25441	422 aa		3.47	□□□□□ -1.85
CMD1	YBR109C	MCM4	P30665	933 aa	Known RBP	3.47	□□□□□ -1.85
CMD1	YBR109C	ANP1	P32629	500 aa		3.47	□□□□□ -1.85
CMD1	YBR109C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.47	□□□□□ -1.85	not detected
CMD1	YBR109C	PCH2	P38126	564 aa		3.47	□□□□□ -1.85
CMD1	YBR109C	TRS85	P46944	698 aa		3.47	□□□□□ -1.85
CMD1	YBR109C	TAX4	P47030	604 aa		3.47	□□□□□ -1.85
CMD1	YBR109C	YNR061C	P53747	219 aa		3.47	□□□□□ -1.85
CMD1	YBR109C	BNI5	P53890	448 aa	Known RBP	3.47	□□□□□ -1.85
CMD1	YBR109C	YAT1	P80235	687 aa		3.47	□□□□□ -1.85
CMD1	YBR109C	EBS1	Q03466	884 aa	Known RBP	3.47	□□□□□ -1.85
CMD1	YBR109C	YDR109C	Q04585	715 aa		3.47	□□□□□ -1.85
CMD1	YBR109C	RCO1	Q04779	684 aa		3.47	□□□□□ -1.85
CMD1	YBR109C	THI3	Q07471	609 aa		3.47	□□□□□ -1.85
CMD1	YBR109C	NOP6	Q07623	225 aa	Known RBP	3.47	□□□□□ -1.85
CMD1	YBR109C	SLK19	Q08581	821 aa	Known RBP	3.47	□□□□□ -1.85
CMD1	YBR109C	CTI6	Q08923	506 aa		3.47	□□□□□ -1.85
CMD1	YBR109C	APL4	Q12028	832 aa		3.47	□□□□□ -1.85
CMD1	YBR109C	DAS2	Q12084	232 aa		3.47	□□□□□ -1.85
CMD1	YBR109C	FOB1	O13329	566 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	JIP3	O13555	125 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	COQ1	P18900	473 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	CDC10	P25342	322 aa	Known RBP	3.46	□□□□□ -1.86
CMD1	YBR109C	ILV6	P25605	309 aa	Known RBP	3.46	□□□□□ -1.86
CMD1	YBR109C	MGM1	P32266	881 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	SRB5	P32585	307 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	YET1	P35723	206 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	HOT13	P36078	116 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	RPC37	P36121	282 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	SPP381	P38282	291 aa	Predicted RBP	3.46	□□□□□ -1.86
CMD1	YBR109C	GDT1	P38301	280 aa	Predicted RBP	3.46	□□□□□ -1.86
CMD1	YBR109C	YEL068C	P39977	110 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	PHM8	P40025	321 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	YJR061W	P40355	935 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	PFK26	P40433	827 aa	Known RBP	3.46	□□□□□ -1.86
CMD1	YBR109C	UBP7	P40453	1071 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	SHQ1	P40486	507 aa	Predicted RBP	3.46	□□□□□ -1.86
CMD1	YBR109C	PCI8	P40512	444 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	SIP4	P46954	829 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	GLO1	P50107	326 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	YGL138C	P53122	345 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	RPT6	Q01939	405 aa	Known RBP	3.46	□□□□□ -1.86
CMD1	YBR109C	INM2	Q05533	292 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	STE23	Q06010	1027 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	IRC3	Q06683	689 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	YPR078C	Q06813	372 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	OSW1	Q08692	278 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	NUS1	Q12063	375 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	RDL1	Q12305	139 aa	Known RBP	3.46	□□□□□ -1.86
CMD1	YBR109C	ERG27	Q12452	347 aa	Known RBP	3.46	□□□□□ -1.86
CMD1	YBR109C	YNL162W-A	Q3E7A8	72 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	RAD61	Q99359	647 aa		3.46	□□□□□ -1.86
CMD1	YBR109C	RAD1	P06777	1100 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	ILV2	P07342	687 aa	Known RBP	3.45	□□□□□ -1.86
CMD1	YBR109C	MAK32	P23060	363 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	GSH1	P32477	678 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	PAH1	P32567	862 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	TFC3	P34111	1160 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	MYO3	P36006	1272 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	SEC9	P40357	651 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	EFM4	P40516	257 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	DOT5	P40553	215 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	YFH7	P43591	353 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	CTK3	P46963	296 aa	Predicted RBP	3.45	□□□□□ -1.86
CMD1	YBR109C	RPC17	P47076	161 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	ILM1	P47155	203 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	SCS3	P53012	380 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	LSB1	P53281	241 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	BTN2	P53286	410 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	CWC22	P53333	577 aa	Known RBP	3.45	□□□□□ -1.86
CMD1	YBR109C	RET3	P53600	189 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	TOF1	P53840	1238 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	BOP3	P53958	396 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	VTI1	Q04338	217 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	YKU80	Q04437	629 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	CRN1	Q06440	651 aa		3.45	□□□□□ -1.86
CMD1	YBR109C	YLH47	Q06493	454 aa		3.45	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 32 ms