RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 GJA8P48165 433 aa20.29■□□□□ 0.84
PHGDH-227ENST00000641811 MB21D2Q8IYB1 491 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-227ENST00000641811 U2AF1L4Q8WU68 220 aaKnown RBP20.29■□□□□ 0.84
PHGDH-227ENST00000641811 UBA5Q9GZZ9 404 aa20.29■□□□□ 0.84
PHGDH-227ENST00000641811 HMX1Q9NP08 348 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-227ENST00000641811 TNRC18O15417 2968 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-227ENST00000641811 SGPL1O95470 568 aa20.28■□□□□ 0.84
PHGDH-227ENST00000641811 IGHA2P01877 340 aa20.28■□□□□ 0.84
PHGDH-227ENST00000641811 CCND3P30281 292 aaPredicted RBP20.28■□□□□ 0.84
PHGDH-227ENST00000641811 MFSD14CQ5VZR4 134 aa20.28■□□□□ 0.84
PHGDH-227ENST00000641811 RANBP17Q9H2T7 1088 aaKnown RBP20.28■□□□□ 0.84
PHGDH-227ENST00000641811 ZNFX1Q9P2E3 1918 aaKnown RBP20.27■□□□□ 0.84
PHGDH-227ENST00000641811 ALAS1P13196 640 aa20.27■□□□□ 0.84
PHGDH-227ENST00000641811 ZNF792Q3KQV3 632 aa20.27■□□□□ 0.84
PHGDH-227ENST00000641811 GPATCH4Q5T3I0 446 aaKnown RBP20.27■□□□□ 0.84
PHGDH-227ENST00000641811 DDX11Q96FC9 970 aa20.27■□□□□ 0.84
PHGDH-227ENST00000641811 MAML3Q96JK9 1138 aa20.27■□□□□ 0.84
PHGDH-227ENST00000641811 GPHNQ9NQX3 736 aaPredicted RBP20.27■□□□□ 0.84
PHGDH-227ENST00000641811 RNF146Q9NTX7 359 aa20.27■□□□□ 0.84
PHGDH-227ENST00000641811 SLC5A4Q9NY91 659 aa20.27■□□□□ 0.84
PHGDH-227ENST00000641811 TFRCP02786 760 aaKnown RBP20.26■□□□□ 0.83
PHGDH-227ENST00000641811 TMEM67Q5HYA8 995 aa20.26■□□□□ 0.83
PHGDH-227ENST00000641811 OLFML2BQ68BL8 750 aa20.26■□□□□ 0.83
PHGDH-227ENST00000641811 TRPV1Q8NER1 839 aa20.26■□□□□ 0.83
PHGDH-227ENST00000641811 CHST13Q8NET6 341 aa20.26■□□□□ 0.83
PHGDH-227ENST00000641811 IGDCC4Q8TDY8 1250 aa20.26■□□□□ 0.83
PHGDH-227ENST00000641811 TRERF1Q96PN7 1200 aa20.26■□□□□ 0.83
PHGDH-227ENST00000641811 CCPG1Q9ULG6 757 aa20.26■□□□□ 0.83
PHGDH-227ENST00000641811 ERICH2A1L162 156 aa20.25■□□□□ 0.83
PHGDH-227ENST00000641811 PRC1O43663 620 aa20.25■□□□□ 0.83
PHGDH-227ENST00000641811 ICAM1P05362 532 aa20.25■□□□□ 0.83
PHGDH-227ENST00000641811 WTAPQ15007 396 aa20.25■□□□□ 0.83
PHGDH-227ENST00000641811 MUM1L1Q5H9M0 696 aa20.25■□□□□ 0.83
PHGDH-227ENST00000641811 RASEFQ8IZ41 740 aa20.25■□□□□ 0.83
PHGDH-227ENST00000641811 ANKRD35Q8N283 1001 aa20.25■□□□□ 0.83
PHGDH-227ENST00000641811 STAG2Q8N3U4 1231 aa20.25■□□□□ 0.83
PHGDH-227ENST00000641811 ACAD9Q9H845 621 aa20.25■□□□□ 0.83
PHGDH-227ENST00000641811 FBXO40Q9UH90 709 aa20.25■□□□□ 0.83
PHGDH-227ENST00000641811 DNAJC25-GNG10A0A024R161 153 aa20.24■□□□□ 0.83
PHGDH-227ENST00000641811 PARP1P09874 1014 aaKnown RBP20.24■□□□□ 0.83
PHGDH-227ENST00000641811 SART3Q15020 963 aaKnown RBP20.24■□□□□ 0.83
PHGDH-227ENST00000641811 ASPRV1Q53RT3 343 aa20.24■□□□□ 0.83
PHGDH-227ENST00000641811 PRAMEF19Q5SWL8 479 aa20.24■□□□□ 0.83
PHGDH-227ENST00000641811 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.24■□□□□ 0.83
PHGDH-227ENST00000641811 CRISPLD2Q9H0B8 497 aa20.24■□□□□ 0.83
PHGDH-227ENST00000641811 CNGA1P29973 690 aa20.23■□□□□ 0.83
PHGDH-227ENST00000641811 TKFCQ3LXA3 575 aa20.23■□□□□ 0.83
PHGDH-227ENST00000641811 RNF20Q5VTR2 975 aa20.23■□□□□ 0.83
PHGDH-227ENST00000641811 ADGRF4Q8IZF3 695 aa20.23■□□□□ 0.83
PHGDH-227ENST00000641811 LY9Q9HBG7 655 aa20.23■□□□□ 0.83
PHGDH-227ENST00000641811 VAT1LQ9HCJ6 419 aa20.23■□□□□ 0.83
PHGDH-227ENST00000641811 A1CFQ9NQ94 594 aaKnown RBP20.23■□□□□ 0.83
PHGDH-227ENST00000641811 DIS3Q9Y2L1 958 aaKnown RBP20.23■□□□□ 0.83
PHGDH-227ENST00000641811 SMCHD1A6NHR9 2005 aa20.22■□□□□ 0.83
PHGDH-227ENST00000641811 CYBAP13498 195 aa20.22■□□□□ 0.83
PHGDH-227ENST00000641811 MCM5P33992 734 aa20.22■□□□□ 0.83
PHGDH-227ENST00000641811 CNTN2Q02246 1040 aa20.22■□□□□ 0.83
PHGDH-227ENST00000641811 LHX8Q68G74 356 aa20.22■□□□□ 0.83
PHGDH-227ENST00000641811 TINF2Q9BSI4 451 aa20.22■□□□□ 0.83
PHGDH-227ENST00000641811 LRRC2Q9BYS8 371 aa20.22■□□□□ 0.83
PHGDH-227ENST00000641811 MAD2L2Q9UI95 211 aa20.22■□□□□ 0.83
PHGDH-227ENST00000641811 PLXNA1Q9UIW2 1896 aa20.22■□□□□ 0.83
PHGDH-227ENST00000641811 KLRF2D3W0D1 207 aa20.21■□□□□ 0.83
PHGDH-227ENST00000641811 ADCK5Q3MIX3 580 aa20.21■□□□□ 0.83
PHGDH-227ENST00000641811 FGD4Q96M96 766 aa20.21■□□□□ 0.83
PHGDH-227ENST00000641811 MKI67P46013 3256 aaKnown RBP20.2■□□□□ 0.82
PHGDH-227ENST00000641811 PALM3A6NDB9 673 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-227ENST00000641811 POTEB2H3BUK9 544 aa20.2■□□□□ 0.82
PHGDH-227ENST00000641811 NFIBO00712 420 aa20.2■□□□□ 0.82
PHGDH-227ENST00000641811 SH2B2O14492 632 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-227ENST00000641811 DHX16O60231 1041 aaKnown RBP20.2■□□□□ 0.82
PHGDH-227ENST00000641811 FARP2O94887 1054 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-227ENST00000641811 TROAPQ12815 778 aa20.2■□□□□ 0.82
PHGDH-227ENST00000641811 GRM4Q14833 912 aa20.2■□□□□ 0.82
PHGDH-227ENST00000641811 CDC37Q16543 378 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-227ENST00000641811 SLC35G1Q2M3R5 365 aa20.2■□□□□ 0.82
PHGDH-227ENST00000641811 NSMFQ6X4W1 530 aa20.2■□□□□ 0.82
PHGDH-227ENST00000641811 UBE2Q1Q7Z7E8 422 aa20.2■□□□□ 0.82
PHGDH-227ENST00000641811 MYL10Q9BUA6 226 aa20.2■□□□□ 0.82
PHGDH-227ENST00000641811 JMJD4Q9H9V9 463 aa20.2■□□□□ 0.82
PHGDH-227ENST00000641811 TSGA10IPQ3SY00 556 aa20.19■□□□□ 0.82
PHGDH-227ENST00000641811 USH1GQ495M9 461 aa20.19■□□□□ 0.82
PHGDH-227ENST00000641811 ANO1Q5XXA6 986 aa20.19■□□□□ 0.82
PHGDH-227ENST00000641811 CATIPQ7Z7H3 387 aa20.19■□□□□ 0.82
PHGDH-227ENST00000641811 FAM133AQ8N9E0 248 aa20.19■□□□□ 0.82
PHGDH-227ENST00000641811 DIS3LQ8TF46 1054 aaKnown RBP20.19■□□□□ 0.82
PHGDH-227ENST00000641811 CLEC4DQ8WXI8 215 aa20.19■□□□□ 0.82
PHGDH-227ENST00000641811 TMEM87BQ96K49 555 aa20.19■□□□□ 0.82
PHGDH-227ENST00000641811 TCEANC2Q96MN5 208 aa20.19■□□□□ 0.82
PHGDH-227ENST00000641811 NEK1Q96PY6 1258 aa20.19■□□□□ 0.82
PHGDH-227ENST00000641811 PURBQ96QR8 312 aaKnown RBP20.19■□□□□ 0.82
PHGDH-227ENST00000641811 CYP39A1Q9NYL5 469 aa20.19■□□□□ 0.82
PHGDH-227ENST00000641811 DDX20Q9UHI6 824 aaKnown RBP20.19■□□□□ 0.82
PHGDH-227ENST00000641811 OGDHLQ9ULD0 1010 aa20.19■□□□□ 0.82
PHGDH-227ENST00000641811 SOWAHBA6NEL2 793 aa20.18■□□□□ 0.82
PHGDH-227ENST00000641811 REC8O95072 547 aa20.18■□□□□ 0.82
PHGDH-227ENST00000641811 SNAI1O95863 264 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-227ENST00000641811 QRICH1Q2TAL8 776 aa20.18■□□□□ 0.82
PHGDH-227ENST00000641811 NFXL1Q6ZNB6 911 aa20.18■□□□□ 0.82
PHGDH-227ENST00000641811 ZNF654Q8IZM8 581 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms