RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 ABCB4P21439 1286 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 CCDC144BQ3MJ40 725 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 CFAP221Q4G0U5 840 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 KCTD1Q719H9 257 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 PEX26Q7Z412 305 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 CNOT6LQ96LI5 555 aaKnown RBP15.97■□□□□ 0.15
SCARB2-216ENST00000639300 PANK4Q9NVE7 773 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 CYP19A1P11511 503 aaPredicted RBP15.97■□□□□ 0.15
SCARB2-216ENST00000639300 CELF1Q92879 486 aaKnown RBP15.97■□□□□ 0.15
SCARB2-216ENST00000639300 PTPREP23469 700 aa15.96■□□□□ 0.15
SCARB2-216ENST00000639300 CACNB1Q02641 598 aaPredicted RBP15.96■□□□□ 0.15
SCARB2-216ENST00000639300 DAAM2Q86T65 1068 aa15.96■□□□□ 0.15
SCARB2-216ENST00000639300 CCDC114Q96M63 670 aa15.96■□□□□ 0.15
SCARB2-216ENST00000639300 DDX41Q9UJV9 622 aaKnown RBP15.96■□□□□ 0.15
SCARB2-216ENST00000639300 IQSEC2Q5JU85 1478 aa15.96■□□□□ 0.15
SCARB2-216ENST00000639300 TMEM232C9JQI7 657 aa15.96■□□□□ 0.15
SCARB2-216ENST00000639300 NMT2O60551 498 aa15.96■□□□□ 0.15
SCARB2-216ENST00000639300 IFT20Q8IY31 132 aa15.96■□□□□ 0.15
SCARB2-216ENST00000639300 GIMAP7Q8NHV1 300 aa15.96■□□□□ 0.15
SCARB2-216ENST00000639300 GJA10Q969M2 543 aa15.96■□□□□ 0.15
SCARB2-216ENST00000639300 OVOS2A0A0J9YW53 1432 aa15.96■□□□□ 0.15
SCARB2-216ENST00000639300 OVOS2Q6IE36 1432 aa15.96■□□□□ 0.15
SCARB2-216ENST00000639300 SOWAHDA6NJG2 315 aa15.96■□□□□ 0.15
SCARB2-216ENST00000639300 TCP10L2B9ZVM9 353 aa15.96■□□□□ 0.15
SCARB2-216ENST00000639300 SF3A3Q12874 501 aaKnown RBP eCLIP15.96■□□□□ 0.15
SCARB2-216ENST00000639300 VSTM4Q8IW00 320 aa15.96■□□□□ 0.15
SCARB2-216ENST00000639300 ACRBPQ8NEB7 543 aa15.96■□□□□ 0.15
SCARB2-216ENST00000639300 KCNK9Q9NPC2 374 aa15.96■□□□□ 0.15
SCARB2-216ENST00000639300 NDUFAB1O14561 156 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 KIF4AO95239 1232 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 ADAM9Q13443 819 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 TSGA10IPQ3SY00 556 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 FBXO11Q86XK2 927 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 BSDC1Q9NW68 430 aaPredicted RBP15.95■□□□□ 0.14
SCARB2-216ENST00000639300 CDC42BPGQ6DT37 1551 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 PABPC4Q13310 644 aaKnown RBP eCLIP15.95■□□□□ 0.14
SCARB2-216ENST00000639300 SMIM5Q71RC9 77 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 PAGE5Q96GU1 130 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 SERPINB13Q9UIV8 391 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 PALLDQ8WX93 1383 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 SEL1L2Q5TEA6 688 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 TRIM58Q8NG06 486 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 U2AF1L4Q8WU68 220 aaKnown RBP15.95■□□□□ 0.14
SCARB2-216ENST00000639300 MINPP1Q9UNW1 487 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 NEXMIFQ5QGS0 1516 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 SEC31AO94979 1220 aaKnown RBP15.95■□□□□ 0.14
SCARB2-216ENST00000639300 NAA30Q147X3 362 aaPredicted RBP15.95■□□□□ 0.14
SCARB2-216ENST00000639300 WHAMMP3Q1A5X7 153 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 SLC44A5Q8NCS7 719 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 STK32BQ9NY57 414 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 CDC23Q9UJX2 597 aa15.95■□□□□ 0.14
SCARB2-216ENST00000639300 GSG1L2A8MUP6 293 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 LARP4BQ92615 738 aaKnown RBP15.94■□□□□ 0.14
SCARB2-216ENST00000639300 MPHOSPH6Q99547 160 aaKnown RBP15.94■□□□□ 0.14
SCARB2-216ENST00000639300 DBNDD1Q9H9R9 158 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.94■□□□□ 0.14
SCARB2-216ENST00000639300 LY9Q9HBG7 655 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 THRAP3Q9Y2W1 955 aaKnown RBP15.94■□□□□ 0.14
SCARB2-216ENST00000639300 STAT1P42224 750 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 BRD3Q15059 726 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 WDR44Q5JSH3 913 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 DNAI2Q9GZS0 605 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 GDAQ9Y2T3 454 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 A0A0G2JLW4 131 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 TRIM28Q13263 835 aaKnown RBP15.94■□□□□ 0.14
SCARB2-216ENST00000639300 ENAHQ8N8S7 591 aaPredicted RBP15.94■□□□□ 0.14
SCARB2-216ENST00000639300 MYO1AQ9UBC5 1043 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 RIPOR2Q9Y4F9 1068 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 ZMYND10O75800 440 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 GUCY2FP51841 1108 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 UBXN2AP68543 259 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 EXOSC10Q01780 885 aaKnown RBP15.94■□□□□ 0.14
SCARB2-216ENST00000639300 CHURC1Q8WUH1 139 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 STAG1Q8WVM7 1258 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 SPTLC3Q9NUV7 552 aa15.94■□□□□ 0.14
SCARB2-216ENST00000639300 RPAP1Q9BWH6 1393 aaPredicted RBP15.93■□□□□ 0.14
SCARB2-216ENST00000639300 GINS2Q9Y248 185 aa15.93■□□□□ 0.14
SCARB2-216ENST00000639300 KDM3AQ9Y4C1 1321 aa15.93■□□□□ 0.14
SCARB2-216ENST00000639300 KIF28PB7ZC32 967 aa15.93■□□□□ 0.14
SCARB2-216ENST00000639300 TRIM37O94972 964 aa15.93■□□□□ 0.14
SCARB2-216ENST00000639300 ALAS1P13196 640 aa15.93■□□□□ 0.14
SCARB2-216ENST00000639300 CYP27A1Q02318 531 aa15.93■□□□□ 0.14
SCARB2-216ENST00000639300 RESP18Q5W5W9 173 aa15.93■□□□□ 0.14
SCARB2-216ENST00000639300 P2RX5Q93086 422 aa15.93■□□□□ 0.14
SCARB2-216ENST00000639300 PICK1Q9NRD5 415 aa15.93■□□□□ 0.14
SCARB2-216ENST00000639300 ZNF609O15014 1411 aa15.93■□□□□ 0.14
SCARB2-216ENST00000639300 KCNK3O14649 394 aa15.93■□□□□ 0.14
SCARB2-216ENST00000639300 ATP2A1O14983 1001 aa15.93■□□□□ 0.14
SCARB2-216ENST00000639300 FOXN1O15353 648 aa15.93■□□□□ 0.14
SCARB2-216ENST00000639300 KCNQ2O43526 872 aa15.93■□□□□ 0.14
SCARB2-216ENST00000639300 CEP83Q9Y592 693 aa15.93■□□□□ 0.14
SCARB2-216ENST00000639300 USP42Q9H9J4 1324 aaKnown RBP15.93■□□□□ 0.14
SCARB2-216ENST00000639300 ZNF658Q5TYW1 1059 aaPredicted RBP15.92■□□□□ 0.14
SCARB2-216ENST00000639300 CCDC121Q6ZUS5 278 aa15.92■□□□□ 0.14
SCARB2-216ENST00000639300 TMTC3Q6ZXV5 915 aa15.92■□□□□ 0.14
SCARB2-216ENST00000639300 FMNL3Q8IVF7 1028 aa15.92■□□□□ 0.14
SCARB2-216ENST00000639300 NUCKS1Q9H1E3 243 aaKnown RBP15.92■□□□□ 0.14
SCARB2-216ENST00000639300 PLCG1P19174 1290 aa15.92■□□□□ 0.14
SCARB2-216ENST00000639300 PDE6BP35913 854 aa15.92■□□□□ 0.14
SCARB2-216ENST00000639300 FAM178BQ8IXR5 827 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms