RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 KCNB2Q92953 911 aa25.48■■□□□ 1.67
SCN1B-206ENST00000638536 TCEANC2Q96MN5 208 aa25.48■■□□□ 1.67
SCN1B-206ENST00000638536 MMP19Q99542 508 aa25.48■■□□□ 1.67
SCN1B-206ENST00000638536 ERICH2A1L162 156 aa25.48■■□□□ 1.67
SCN1B-206ENST00000638536 HMGCRP04035 888 aa25.48■■□□□ 1.67
SCN1B-206ENST00000638536 GPATCH4Q5T3I0 446 aaKnown RBP25.48■■□□□ 1.67
SCN1B-206ENST00000638536 DPP9Q86TI2 863 aa25.48■■□□□ 1.67
SCN1B-206ENST00000638536 NEK1Q96PY6 1258 aa25.48■■□□□ 1.67
SCN1B-206ENST00000638536 EN2P19622 333 aaPredicted RBP25.47■■□□□ 1.67
SCN1B-206ENST00000638536 UBXN2AP68543 259 aa25.47■■□□□ 1.67
SCN1B-206ENST00000638536 ABRAQ8N0Z2 381 aa25.47■■□□□ 1.67
SCN1B-206ENST00000638536 MAD2L2Q9UI95 211 aa25.47■■□□□ 1.67
SCN1B-206ENST00000638536 SNX14Q9Y5W7 946 aa25.47■■□□□ 1.67
SCN1B-206ENST00000638536 SH2B2O14492 632 aaPredicted RBP25.46■■□□□ 1.67
SCN1B-206ENST00000638536 REC8O95072 547 aa25.46■■□□□ 1.67
SCN1B-206ENST00000638536 IGHA2P01877 340 aa25.46■■□□□ 1.67
SCN1B-206ENST00000638536 PARP1P09874 1014 aaKnown RBP25.46■■□□□ 1.67
SCN1B-206ENST00000638536 CPA1P15085 419 aa25.46■■□□□ 1.67
SCN1B-206ENST00000638536 ZKSCAN1P17029 563 aaPredicted RBP25.46■■□□□ 1.67
SCN1B-206ENST00000638536 TROAPQ12815 778 aa25.46■■□□□ 1.67
SCN1B-206ENST00000638536 SART3Q15020 963 aaKnown RBP25.46■■□□□ 1.67
SCN1B-206ENST00000638536 SLC35G1Q2M3R5 365 aa25.46■■□□□ 1.67
SCN1B-206ENST00000638536 MYL10Q9BUA6 226 aa25.46■■□□□ 1.67
SCN1B-206ENST00000638536 RNF208Q9H0X6 261 aa25.46■■□□□ 1.67
SCN1B-206ENST00000638536 MCM3APO60318 1980 aa25.46■■□□□ 1.67
SCN1B-206ENST00000638536 ALAS1P13196 640 aa25.45■■□□□ 1.67
SCN1B-206ENST00000638536 CACNB2Q08289 660 aaPredicted RBP25.45■■□□□ 1.67
SCN1B-206ENST00000638536 KCTD2Q14681 263 aa25.45■■□□□ 1.67
SCN1B-206ENST00000638536 ASPRV1Q53RT3 343 aa25.45■■□□□ 1.67
SCN1B-206ENST00000638536 MUM1L1Q5H9M0 696 aa25.45■■□□□ 1.67
SCN1B-206ENST00000638536 ADGRF4Q8IZF3 695 aa25.45■■□□□ 1.67
SCN1B-206ENST00000638536 TMEM106CQ9BVX2 250 aa25.45■■□□□ 1.67
SCN1B-206ENST00000638536 USP26Q9BXU7 913 aa25.45■■□□□ 1.67
SCN1B-206ENST00000638536 ICAM1P05362 532 aa25.45■■□□□ 1.66
SCN1B-206ENST00000638536 CYP2C19P33261 490 aa25.45■■□□□ 1.66
SCN1B-206ENST00000638536 COPB2P35606 906 aa25.45■■□□□ 1.66
SCN1B-206ENST00000638536 EXOSC10Q01780 885 aaKnown RBP25.45■■□□□ 1.66
SCN1B-206ENST00000638536 MAP3K21Q5TCX8 1036 aa25.45■■□□□ 1.66
SCN1B-206ENST00000638536 RNF146Q9NTX7 359 aa25.45■■□□□ 1.66
SCN1B-206ENST00000638536 PALM3A6NDB9 673 aaPredicted RBP25.44■■□□□ 1.66
SCN1B-206ENST00000638536 PRKAR2AP13861 404 aaKnown RBP25.44■■□□□ 1.66
SCN1B-206ENST00000638536 ZNF792Q3KQV3 632 aa25.44■■□□□ 1.66
SCN1B-206ENST00000638536 TRERF1Q96PN7 1200 aa25.44■■□□□ 1.66
SCN1B-206ENST00000638536 VAT1LQ9HCJ6 419 aa25.44■■□□□ 1.66
SCN1B-206ENST00000638536 CCPG1Q9ULG6 757 aa25.44■■□□□ 1.66
SCN1B-206ENST00000638536 LCTP09848 1927 aa25.43■■□□□ 1.66
SCN1B-206ENST00000638536 RGS19P49795 217 aa25.43■■□□□ 1.66
SCN1B-206ENST00000638536 GRM4Q14833 912 aa25.43■■□□□ 1.66
SCN1B-206ENST00000638536 CHST13Q8NET6 341 aa25.43■■□□□ 1.66
SCN1B-206ENST00000638536 MAML3Q96JK9 1138 aa25.43■■□□□ 1.66
SCN1B-206ENST00000638536 TMEM87BQ96K49 555 aa25.43■■□□□ 1.66
SCN1B-206ENST00000638536 DNAJC25-GNG10A0A024R161 153 aa25.42■■□□□ 1.66
SCN1B-206ENST00000638536 KLRF2D3W0D1 207 aa25.42■■□□□ 1.66
SCN1B-206ENST00000638536 CCND3P30281 292 aaPredicted RBP25.42■■□□□ 1.66
SCN1B-206ENST00000638536 RAB11FIP4Q86YS3 637 aa25.42■■□□□ 1.66
SCN1B-206ENST00000638536 ZNF654Q8IZM8 581 aa25.42■■□□□ 1.66
SCN1B-206ENST00000638536 MTA3Q9BTC8 594 aa25.42■■□□□ 1.66
SCN1B-206ENST00000638536 JMJD4Q9H9V9 463 aa25.42■■□□□ 1.66
SCN1B-206ENST00000638536 PAK6Q9NQU5 681 aaPredicted RBP25.42■■□□□ 1.66
SCN1B-206ENST00000638536 RXRAP19793 462 aa25.41■■□□□ 1.66
SCN1B-206ENST00000638536 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.41■■□□□ 1.66
SCN1B-206ENST00000638536 DHX32Q7L7V1 743 aaKnown RBP25.41■■□□□ 1.66
SCN1B-206ENST00000638536 TRMT44Q8IYL2 757 aaKnown RBP25.41■■□□□ 1.66
SCN1B-206ENST00000638536 NUP133Q8WUM0 1156 aa25.41■■□□□ 1.66
SCN1B-206ENST00000638536 SHISA4Q96DD7 197 aa25.41■■□□□ 1.66
SCN1B-206ENST00000638536 ACAD9Q9H845 621 aa25.41■■□□□ 1.66
SCN1B-206ENST00000638536 A1CFQ9NQ94 594 aaKnown RBP25.41■■□□□ 1.66
SCN1B-206ENST00000638536 GJB1P08034 283 aa25.41■■□□□ 1.66
SCN1B-206ENST00000638536 CDC37Q16543 378 aaPredicted RBP25.41■■□□□ 1.66
SCN1B-206ENST00000638536 CATIPQ7Z7H3 387 aa25.41■■□□□ 1.66
SCN1B-206ENST00000638536 ANKRD35Q8N283 1001 aa25.41■■□□□ 1.66
SCN1B-206ENST00000638536 TRPV1Q8NER1 839 aa25.41■■□□□ 1.66
SCN1B-206ENST00000638536 DDX11Q96FC9 970 aa25.41■■□□□ 1.66
SCN1B-206ENST00000638536 FGD4Q96M96 766 aa25.41■■□□□ 1.66
SCN1B-206ENST00000638536 JAKMIP1Q96N16 626 aaKnown RBP25.41■■□□□ 1.66
SCN1B-206ENST00000638536 DEFB118Q96PH6 123 aa25.41■■□□□ 1.66
SCN1B-206ENST00000638536 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.41■■□□□ 1.66
SCN1B-206ENST00000638536 FBXO40Q9UH90 709 aa25.41■■□□□ 1.66
SCN1B-206ENST00000638536 RPTORQ8N122 1335 aa25.4■■□□□ 1.66
SCN1B-206ENST00000638536 LIFRP42702 1097 aa25.4■■□□□ 1.66
SCN1B-206ENST00000638536 KRT32Q14532 448 aa25.4■■□□□ 1.66
SCN1B-206ENST00000638536 PRAMEF19Q5SWL8 479 aa25.4■■□□□ 1.66
SCN1B-206ENST00000638536 OLFML2BQ68BL8 750 aa25.4■■□□□ 1.66
SCN1B-206ENST00000638536 NFIBO00712 420 aa25.39■■□□□ 1.66
SCN1B-206ENST00000638536 CYTH3O43739 400 aa25.39■■□□□ 1.66
SCN1B-206ENST00000638536 SEC24BO95487 1268 aa25.39■■□□□ 1.66
SCN1B-206ENST00000638536 CNTN2Q02246 1040 aa25.39■■□□□ 1.66
SCN1B-206ENST00000638536 TKFCQ3LXA3 575 aa25.39■■□□□ 1.66
SCN1B-206ENST00000638536 USH1GQ495M9 461 aa25.39■■□□□ 1.66
SCN1B-206ENST00000638536 NFXL1Q6ZNB6 911 aa25.39■■□□□ 1.66
SCN1B-206ENST00000638536 CLEC4DQ8WXI8 215 aa25.39■■□□□ 1.66
SCN1B-206ENST00000638536 PURBQ96QR8 312 aaKnown RBP25.39■■□□□ 1.66
SCN1B-206ENST00000638536 HMX1Q9NP08 348 aaPredicted RBP25.39■■□□□ 1.66
SCN1B-206ENST00000638536 PDE4DIPQ5VU43 2346 aa25.39■■□□□ 1.65
SCN1B-206ENST00000638536 DHX16O60231 1041 aaKnown RBP25.38■■□□□ 1.65
SCN1B-206ENST00000638536 QRICH1Q2TAL8 776 aa25.38■■□□□ 1.65
SCN1B-206ENST00000638536 MFSD14CQ5VZR4 134 aa25.38■■□□□ 1.65
SCN1B-206ENST00000638536 U2AF1L4Q8WU68 220 aaKnown RBP25.38■■□□□ 1.65
SCN1B-206ENST00000638536 CCDC69A6NI79 296 aa25.37■■□□□ 1.65
SCN1B-206ENST00000638536 GJA8P48165 433 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms