RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 TOP1P11387 765 aaKnown RBP19.02■□□□□ 0.64
CACNA1A-229ENST00000636670 DNAJB2P25686 324 aa19.02■□□□□ 0.64
CACNA1A-229ENST00000636670 COG2Q14746 738 aa19.02■□□□□ 0.64
CACNA1A-229ENST00000636670 FAM83BQ5T0W9 1011 aa19.02■□□□□ 0.64
CACNA1A-229ENST00000636670 RALYLQ86SE5 291 aaKnown RBP19.02■□□□□ 0.64
CACNA1A-229ENST00000636670 GMCL1Q96IK5 515 aa19.02■□□□□ 0.64
CACNA1A-229ENST00000636670 TTC14Q96N46 770 aa19.02■□□□□ 0.64
CACNA1A-229ENST00000636670 RBPJLQ9UBG7 517 aa19.02■□□□□ 0.64
CACNA1A-229ENST00000636670 RABGAP1Q9Y3P9 1069 aa19.02■□□□□ 0.64
CACNA1A-229ENST00000636670 E7EWF7 191 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 PEX10O60683 326 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 REC8O95072 547 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 CNGA1P29973 690 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 DSG3P32926 999 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 ERVK-9P63128 1117 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 ERVK-24P63145 666 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 MAP2K5Q13163 448 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 SNX17Q15036 470 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 NECTIN1Q15223 517 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 Q3C1V9 767 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 RNF20Q5VTR2 975 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 SLFN13Q68D06 897 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 RCSD1Q6JBY9 416 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 STOX1Q6ZVD7 989 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 MB21D1Q8N884 522 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 ARRDC4Q8NCT1 418 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 NCOA7Q8NI08 942 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 PDLIM7Q9NR12 457 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 HOXC10Q9NYD6 342 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 PLXNA1Q9UIW2 1896 aa19.01■□□□□ 0.63
CACNA1A-229ENST00000636670 TNKSO95271 1327 aa19■□□□□ 0.63
CACNA1A-229ENST00000636670 TRIM43BA6NCK2 446 aa19■□□□□ 0.63
CACNA1A-229ENST00000636670 SLC27A2O14975 620 aa19■□□□□ 0.63
CACNA1A-229ENST00000636670 TRIM60Q495X7 471 aa19■□□□□ 0.63
CACNA1A-229ENST00000636670 CREB3L3Q68CJ9 461 aa19■□□□□ 0.63
CACNA1A-229ENST00000636670 DGKHQ86XP1 1220 aa19■□□□□ 0.63
CACNA1A-229ENST00000636670 TRIM43Q96BQ3 446 aaPredicted RBP19■□□□□ 0.63
CACNA1A-229ENST00000636670 TMEM47Q9BQJ4 181 aa19■□□□□ 0.63
CACNA1A-229ENST00000636670 UBAC1Q9BSL1 405 aa19■□□□□ 0.63
CACNA1A-229ENST00000636670 PAGR1Q9BTK6 254 aa19■□□□□ 0.63
CACNA1A-229ENST00000636670 PORCNQ9H237 461 aa19■□□□□ 0.63
CACNA1A-229ENST00000636670 ZSWIM5Q9P217 1185 aa19■□□□□ 0.63
CACNA1A-229ENST00000636670 PPP1R9AQ9ULJ8 1098 aa19■□□□□ 0.63
CACNA1A-229ENST00000636670 TAF6LQ9Y6J9 622 aa19■□□□□ 0.63
CACNA1A-229ENST00000636670 ZNFX1Q9P2E3 1918 aaKnown RBP19■□□□□ 0.63
CACNA1A-229ENST00000636670 EPB41L2O43491 1005 aaKnown RBP18.99■□□□□ 0.63
CACNA1A-229ENST00000636670 CNMDO75829 334 aa18.99■□□□□ 0.63
CACNA1A-229ENST00000636670 BMP3P12645 472 aa18.99■□□□□ 0.63
CACNA1A-229ENST00000636670 GJC2Q5T442 439 aaPredicted RBP18.99■□□□□ 0.63
CACNA1A-229ENST00000636670 C1orf53Q5VUE5 145 aa18.99■□□□□ 0.63
CACNA1A-229ENST00000636670 POTEEQ6S8J3 1075 aa18.99■□□□□ 0.63
CACNA1A-229ENST00000636670 SH3RF1Q7Z6J0 888 aa18.99■□□□□ 0.63
CACNA1A-229ENST00000636670 DCAF4Q8WV16 495 aa18.99■□□□□ 0.63
CACNA1A-229ENST00000636670 TIFAQ96CG3 184 aa18.99■□□□□ 0.63
CACNA1A-229ENST00000636670 ATG4CQ96DT6 458 aa18.99■□□□□ 0.63
CACNA1A-229ENST00000636670 ZSCAN10Q96SZ4 725 aaPredicted RBP18.99■□□□□ 0.63
CACNA1A-229ENST00000636670 NUP88Q99567 741 aaPredicted RBP18.99■□□□□ 0.63
CACNA1A-229ENST00000636670 SLF1Q9BQI6 1058 aa18.99■□□□□ 0.63
CACNA1A-229ENST00000636670 ZKSCAN3Q9BRR0 538 aa18.99■□□□□ 0.63
CACNA1A-229ENST00000636670 CWC22Q9HCG8 908 aaKnown RBP18.99■□□□□ 0.63
CACNA1A-229ENST00000636670 PIEZO1Q92508 2521 aa18.99■□□□□ 0.63
CACNA1A-229ENST00000636670 SLC1A4P43007 532 aa18.98■□□□□ 0.63
CACNA1A-229ENST00000636670 CCNA1P78396 465 aa18.98■□□□□ 0.63
CACNA1A-229ENST00000636670 MB21D2Q8IYB1 491 aaPredicted RBP18.98■□□□□ 0.63
CACNA1A-229ENST00000636670 ENAHQ8N8S7 591 aaPredicted RBP18.98■□□□□ 0.63
CACNA1A-229ENST00000636670 ANKS1AQ92625 1134 aa18.98■□□□□ 0.63
CACNA1A-229ENST00000636670 FBXO28Q9NVF7 368 aa18.98■□□□□ 0.63
CACNA1A-229ENST00000636670 FLRT1Q9NZU1 646 aa18.98■□□□□ 0.63
CACNA1A-229ENST00000636670 FEM1BQ9UK73 627 aa18.98■□□□□ 0.63
CACNA1A-229ENST00000636670 KBTBD13C9JR72 458 aa18.97■□□□□ 0.63
CACNA1A-229ENST00000636670 STAT2P52630 851 aa18.97■□□□□ 0.63
CACNA1A-229ENST00000636670 CYB5R4Q7L1T6 521 aa18.97■□□□□ 0.63
CACNA1A-229ENST00000636670 FAM160B2Q86V87 743 aa18.97■□□□□ 0.63
CACNA1A-229ENST00000636670 LRFN3Q9BTN0 628 aa18.97■□□□□ 0.63
CACNA1A-229ENST00000636670 BTBD7Q9P203 1132 aa18.97■□□□□ 0.63
CACNA1A-229ENST00000636670 ADAMTS5Q9UNA0 930 aa18.97■□□□□ 0.63
CACNA1A-229ENST00000636670 PLA2G6O60733 806 aa18.96■□□□□ 0.63
CACNA1A-229ENST00000636670 SNHG28P0DPA3 235 aa18.96■□□□□ 0.63
CACNA1A-229ENST00000636670 EPHB4P54760 987 aa18.96■□□□□ 0.63
CACNA1A-229ENST00000636670 SART3Q15020 963 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-229ENST00000636670 SEC23AQ15436 765 aa18.96■□□□□ 0.63
CACNA1A-229ENST00000636670 PNMA1Q8ND90 353 aa18.96■□□□□ 0.63
CACNA1A-229ENST00000636670 MTA3Q9BTC8 594 aa18.96■□□□□ 0.63
CACNA1A-229ENST00000636670 KAT14Q9H8E8 782 aa18.96■□□□□ 0.63
CACNA1A-229ENST00000636670 ERICH2A1L162 156 aa18.95■□□□□ 0.62
CACNA1A-229ENST00000636670 FDX1P10109 184 aa18.95■□□□□ 0.62
CACNA1A-229ENST00000636670 PDHBP11177 359 aa18.95■□□□□ 0.62
CACNA1A-229ENST00000636670 MCCP23508 829 aa18.95■□□□□ 0.62
CACNA1A-229ENST00000636670 ITGB8P26012 769 aa18.95■□□□□ 0.62
CACNA1A-229ENST00000636670 CCDC96Q2M329 555 aa18.95■□□□□ 0.62
CACNA1A-229ENST00000636670 TSGA10IPQ3SY00 556 aa18.95■□□□□ 0.62
CACNA1A-229ENST00000636670 IFIT1BQ5T764 474 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-229ENST00000636670 RASGRP2Q7LDG7 609 aa18.95■□□□□ 0.62
CACNA1A-229ENST00000636670 PRPF38AQ8NAV1 312 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-229ENST00000636670 SHCBP1Q8NEM2 672 aa18.95■□□□□ 0.62
CACNA1A-229ENST00000636670 SPATC1LQ9H0A9 340 aa18.95■□□□□ 0.62
CACNA1A-229ENST00000636670 ISY1Q9ULR0 285 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-229ENST00000636670 TMEM232C9JQI7 657 aa18.94■□□□□ 0.62
CACNA1A-229ENST00000636670 VWA5AO00534 786 aa18.94■□□□□ 0.62
CACNA1A-229ENST00000636670 HOXC6P09630 235 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms