RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 LIMA1Q9UHB6 759 aaKnown RBP15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 MYO6Q9UM54 1294 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 RCCD1A6NED2 376 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 RAD21O60216 631 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 PLCG1P19174 1290 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 KIF5BP33176 963 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 STK4Q13043 487 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 TXNRD1Q16881 649 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 BEND6Q5SZJ8 279 aaPredicted RBP15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 CEP112Q8N8E3 955 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 RIN2Q8WYP3 895 aaPredicted RBP15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 NAA15Q9BXJ9 866 aaKnown RBP15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 SLC39A2Q9NP94 309 aa15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 BIN2Q9UBW5 565 aaPredicted RBP15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 TTF2Q9UNY4 1162 aaKnown RBP15.76■□□□□ 0.11
CACNA1A-228ENST00000636610 MYH14Q7Z406 1995 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 PDE4DQ08499 809 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 NFIXQ14938 502 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 FBXO33Q7Z6M2 555 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 ZNF444Q8N0Y2 327 aaPredicted RBP15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 ANKRD13CQ8N6S4 541 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 C4orf32Q8N8J7 132 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 SETDB2Q96T68 719 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 MAGEC2Q9UBF1 373 aaPredicted RBP15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 PCDHA6Q9UN73 950 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 PCDHA4Q9UN74 947 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 PCDHA8Q9Y5H6 950 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 CCDC151A5D8V7 595 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 GNPATO15228 680 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 MTIF2P46199 727 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 RCAN1P53805 252 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 PPARDQ03181 441 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 TBC1D8BQ0IIM8 1120 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 ENOX2Q16206 610 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 MB21D1Q8N884 522 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 MMS19Q96T76 1030 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 RABEP2Q9H5N1 569 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 SMARCAL1Q9NZC9 954 aa15.75■□□□□ 0.11
CACNA1A-228ENST00000636610 TXKP42681 527 aa15.74■□□□□ 0.11
CACNA1A-228ENST00000636610 NAPAP54920 295 aa15.74■□□□□ 0.11
CACNA1A-228ENST00000636610 ADSSL1Q8N142 457 aa15.74■□□□□ 0.11
CACNA1A-228ENST00000636610 OR8K1Q8NGG5 319 aa15.74■□□□□ 0.11
CACNA1A-228ENST00000636610 CAGE1Q8TC20 777 aa15.74■□□□□ 0.11
CACNA1A-228ENST00000636610 JADE2Q9NQC1 790 aa15.74■□□□□ 0.11
CACNA1A-228ENST00000636610 TMEM260Q9NX78 707 aa15.74■□□□□ 0.11
CACNA1A-228ENST00000636610 TUBGCP2Q9BSJ2 902 aa15.74■□□□□ 0.11
CACNA1A-228ENST00000636610 KANSL2Q9H9L4 492 aa15.74■□□□□ 0.11
CACNA1A-228ENST00000636610 FAM207AQ9NSI2 230 aaPredicted RBP15.74■□□□□ 0.11
CACNA1A-228ENST00000636610 VGLL3A8MV65 326 aa15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 SLURP2P0DP57 97 aa15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 IDEP14735 1019 aa15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 WDR59Q6PJI9 974 aa15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 MTA3Q9BTC8 594 aa15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 MAD2L2Q9UI95 211 aa15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 FRMPD2Q68DX3 1309 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 KLRF2D3W0D1 207 aa15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 ZPR1O75312 459 aa15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 CXCR5P32302 372 aa15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 ANKRD40Q6AI12 368 aa15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 LRRIQ3A6PVS8 624 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 PSMA7O14818 248 aa15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 LDHBP07195 334 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 HERVK_113P62684 666 aa15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 LRRC41Q15345 812 aa15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 FOXR1Q6PIV2 292 aa15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 CCDC155Q8N6L0 562 aa15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 TMEM47Q9BQJ4 181 aa15.73■□□□□ 0.11
CACNA1A-228ENST00000636610 ORC4O43929 436 aa15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 CALML3P27482 149 aa15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 LONP1P36776 959 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 PIP4K2BP78356 416 aa15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 SPAG1Q07617 926 aa15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 CASP8Q14790 479 aa15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 SF3B3Q15393 1217 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 ZSCAN26Q16670 478 aa15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 CABP7Q86V35 215 aa15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 TRIM34Q9BYJ4 488 aa15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 ATP8A2Q9NTI2 1148 aa15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 RMND1Q9NWS8 449 aa15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 XIRP1Q702N8 1843 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 DISP2A7MBM2 1401 aa15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 F8W031 263 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 CAPN2P17655 700 aa15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 IRX5P78411 483 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 RAD51AP2Q09MP3 1159 aa15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 EHD2Q9NZN4 543 aa15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 CALCOCO1Q9P1Z2 691 aa15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 ARPP21Q9UBL0 812 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-228ENST00000636610 SMCO2A6NFE2 343 aa15.71■□□□□ 0.11
CACNA1A-228ENST00000636610 LRRC10BA6NIK2 292 aa15.71■□□□□ 0.11
CACNA1A-228ENST00000636610 H7C1D1 291 aa15.71■□□□□ 0.11
CACNA1A-228ENST00000636610 BRD3Q15059 726 aa15.71■□□□□ 0.11
CACNA1A-228ENST00000636610 C12orf60Q5U649 245 aa15.71■□□□□ 0.11
CACNA1A-228ENST00000636610 HDXQ7Z353 690 aa15.71■□□□□ 0.11
CACNA1A-228ENST00000636610 CNOT6LQ96LI5 555 aaKnown RBP15.71■□□□□ 0.11
CACNA1A-228ENST00000636610 NOC4LQ9BVI4 516 aaKnown RBP15.71■□□□□ 0.11
CACNA1A-228ENST00000636610 LCMT1Q9UIC8 334 aa15.71■□□□□ 0.11
CACNA1A-228ENST00000636610 DUOX1Q9NRD9 1551 aa15.71■□□□□ 0.11
CACNA1A-228ENST00000636610 KLRC4O43908 158 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms