RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 PGK2P07205 417 aa24.41■■□□□ 1.5
SF1-221ENST00000633899 PARP1P09874 1014 aaKnown RBP24.41■■□□□ 1.5
SF1-221ENST00000633899 GOLGA8HP0CJ92 632 aa24.41■■□□□ 1.5
SF1-221ENST00000633899 ALAS1P13196 640 aa24.41■■□□□ 1.5
SF1-221ENST00000633899 WTAPQ15007 396 aa24.41■■□□□ 1.5
SF1-221ENST00000633899 TKFCQ3LXA3 575 aa24.41■■□□□ 1.5
SF1-221ENST00000633899 ASPRV1Q53RT3 343 aa24.41■■□□□ 1.5
SF1-221ENST00000633899 MAP3K21Q5TCX8 1036 aa24.41■■□□□ 1.5
SF1-221ENST00000633899 OLFML2BQ68BL8 750 aa24.41■■□□□ 1.5
SF1-221ENST00000633899 ANKRD35Q8N283 1001 aa24.41■■□□□ 1.5
SF1-221ENST00000633899 AGBL1Q96MI9 1066 aa24.41■■□□□ 1.5
SF1-221ENST00000633899 RANBP17Q9H2T7 1088 aaKnown RBP24.41■■□□□ 1.5
SF1-221ENST00000633899 ACAD9Q9H845 621 aa24.41■■□□□ 1.5
SF1-221ENST00000633899 CCPG1Q9ULG6 757 aa24.41■■□□□ 1.5
SF1-221ENST00000633899 MYH6P13533 1939 aa24.41■■□□□ 1.5
SF1-221ENST00000633899 BRCA2P51587 3418 aa24.4■■□□□ 1.5
SF1-221ENST00000633899 CAPN2P17655 700 aa24.4■■□□□ 1.5
SF1-221ENST00000633899 NECTIN1Q15223 517 aa24.4■■□□□ 1.5
SF1-221ENST00000633899 SEC23AQ15436 765 aa24.4■■□□□ 1.5
SF1-221ENST00000633899 CHST3Q7LGC8 479 aa24.4■■□□□ 1.5
SF1-221ENST00000633899 MAML3Q96JK9 1138 aa24.4■■□□□ 1.5
SF1-221ENST00000633899 RNF146Q9NTX7 359 aa24.4■■□□□ 1.5
SF1-221ENST00000633899 ZNF536O15090 1300 aa24.39■■□□□ 1.5
SF1-221ENST00000633899 CYP2C19P33261 490 aa24.39■■□□□ 1.49
SF1-221ENST00000633899 TMEM67Q5HYA8 995 aa24.39■■□□□ 1.49
SF1-221ENST00000633899 MB21D2Q8IYB1 491 aaPredicted RBP24.39■■□□□ 1.49
SF1-221ENST00000633899 SHISA4Q96DD7 197 aa24.39■■□□□ 1.49
SF1-221ENST00000633899 TRERF1Q96PN7 1200 aa24.39■■□□□ 1.49
SF1-221ENST00000633899 PNMA2Q9UL42 364 aa24.39■■□□□ 1.49
SF1-221ENST00000633899 DIS3Q9Y2L1 958 aaKnown RBP24.39■■□□□ 1.49
SF1-221ENST00000633899 DHX16O60231 1041 aaKnown RBP24.38■■□□□ 1.49
SF1-221ENST00000633899 ICAM1P05362 532 aa24.38■■□□□ 1.49
SF1-221ENST00000633899 CNGA1P29973 690 aa24.38■■□□□ 1.49
SF1-221ENST00000633899 CCND3P30281 292 aaPredicted RBP24.38■■□□□ 1.49
SF1-221ENST00000633899 MCM5P33992 734 aa24.37■■□□□ 1.49
SF1-221ENST00000633899 ZNF792Q3KQV3 632 aa24.37■■□□□ 1.49
SF1-221ENST00000633899 UBA5Q9GZZ9 404 aa24.37■■□□□ 1.49
SF1-221ENST00000633899 FRMPD3Q5JV73 1810 aa24.36■■□□□ 1.49
SF1-221ENST00000633899 SMCHD1A6NHR9 2005 aa24.36■■□□□ 1.49
SF1-221ENST00000633899 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.36■■□□□ 1.492e-12■□□□□ 10.2
SF1-221ENST00000633899 PRC1O43663 620 aa24.35■■□□□ 1.49
SF1-221ENST00000633899 FARP2O94887 1054 aaPredicted RBP24.35■■□□□ 1.49
SF1-221ENST00000633899 REC8O95072 547 aa24.35■■□□□ 1.49
SF1-221ENST00000633899 CATIPQ7Z7H3 387 aa24.35■■□□□ 1.49
SF1-221ENST00000633899 TINF2Q9BSI4 451 aa24.35■■□□□ 1.49
SF1-221ENST00000633899 CRISPLD2Q9H0B8 497 aa24.35■■□□□ 1.49
SF1-221ENST00000633899 CPVLQ9H3G5 476 aa24.35■■□□□ 1.49
SF1-221ENST00000633899 PFASO15067 1338 aa24.35■■□□□ 1.49
SF1-221ENST00000633899 MSCO60682 206 aa24.34■■□□□ 1.49
SF1-221ENST00000633899 ANTXR2P58335 489 aa24.34■■□□□ 1.49
SF1-221ENST00000633899 TMEM87BQ96K49 555 aa24.34■■□□□ 1.49
SF1-221ENST00000633899 MTA3Q9BTC8 594 aa24.34■■□□□ 1.49
SF1-221ENST00000633899 DNAJC25-GNG10A0A024R161 153 aa24.33■■□□□ 1.49
SF1-221ENST00000633899 POTEB2H3BUK9 544 aa24.33■■□□□ 1.49
SF1-221ENST00000633899 CYBAP13498 195 aa24.33■■□□□ 1.49
SF1-221ENST00000633899 CDC37Q16543 378 aaPredicted RBP24.33■■□□□ 1.49
SF1-221ENST00000633899 NSMFQ6X4W1 530 aa24.33■■□□□ 1.49
SF1-221ENST00000633899 NFXL1Q6ZNB6 911 aa24.33■■□□□ 1.49
SF1-221ENST00000633899 A1CFQ9NQ94 594 aaKnown RBP24.33■■□□□ 1.49
SF1-221ENST00000633899 WDR19Q8NEZ3 1342 aa24.33■■□□□ 1.48
SF1-221ENST00000633899 KRT32Q14532 448 aa24.32■■□□□ 1.48
SF1-221ENST00000633899 MUM1L1Q5H9M0 696 aa24.32■■□□□ 1.48
SF1-221ENST00000633899 ADGRF4Q8IZF3 695 aa24.32■■□□□ 1.48
SF1-221ENST00000633899 MSL3Q8N5Y2 521 aaKnown RBP24.32■■□□□ 1.48
SF1-221ENST00000633899 ANKLE1Q8NAG6 615 aa24.32■■□□□ 1.48
SF1-221ENST00000633899 IGDCC4Q8TDY8 1250 aa24.32■■□□□ 1.48
SF1-221ENST00000633899 NUP133Q8WUM0 1156 aa24.32■■□□□ 1.48
SF1-221ENST00000633899 NEK1Q96PY6 1258 aa24.32■■□□□ 1.48
SF1-221ENST00000633899 SENP2Q9HC62 589 aa24.32■■□□□ 1.48
SF1-221ENST00000633899 VAT1LQ9HCJ6 419 aa24.32■■□□□ 1.48
SF1-221ENST00000633899 DDX20Q9UHI6 824 aaKnown RBP24.32■■□□□ 1.48
SF1-221ENST00000633899 CNPY2Q9Y2B0 182 aa24.32■■□□□ 1.48
SF1-221ENST00000633899 MCM3APO60318 1980 aa24.32■■□□□ 1.48
SF1-221ENST00000633899 CCDC69A6NI79 296 aa24.31■■□□□ 1.48
SF1-221ENST00000633899 KLRF2D3W0D1 207 aa24.31■■□□□ 1.48
SF1-221ENST00000633899 IGHA2P01877 340 aa24.31■■□□□ 1.48
SF1-221ENST00000633899 TAL1P17542 331 aaPredicted RBP24.31■■□□□ 1.48
SF1-221ENST00000633899 GRM4Q14833 912 aa24.31■■□□□ 1.48
SF1-221ENST00000633899 ZNF467Q7Z7K2 595 aaPredicted RBP24.31■■□□□ 1.48
SF1-221ENST00000633899 TMTC2Q8N394 836 aa24.31■■□□□ 1.48
SF1-221ENST00000633899 LY9Q9HBG7 655 aa24.31■■□□□ 1.48
SF1-221ENST00000633899 NRBP1Q9UHY1 535 aa24.31■■□□□ 1.48
SF1-221ENST00000633899 OGDHLQ9ULD0 1010 aa24.31■■□□□ 1.48
SF1-221ENST00000633899 TNRC18O15417 2968 aaPredicted RBP24.31■■□□□ 1.48
SF1-221ENST00000633899 USH1GQ495M9 461 aa24.3■■□□□ 1.48
SF1-221ENST00000633899 PRAMEF19Q5SWL8 479 aa24.3■■□□□ 1.48
SF1-221ENST00000633899 STAG2Q8N3U4 1231 aa24.3■■□□□ 1.48
SF1-221ENST00000633899 TRPV1Q8NER1 839 aa24.3■■□□□ 1.48
SF1-221ENST00000633899 MAD2L2Q9UI95 211 aa24.3■■□□□ 1.48
SF1-221ENST00000633899 SYNGAP1Q96PV0 1343 aa24.3■■□□□ 1.48
SF1-221ENST00000633899 PDE4DIPQ5VU43 2346 aa24.29■■□□□ 1.48
SF1-221ENST00000633899 PTPDC1A2A3K4 754 aa24.29■■□□□ 1.48
SF1-221ENST00000633899 SH2B2O14492 632 aaPredicted RBP24.29■■□□□ 1.48
SF1-221ENST00000633899 SEPT4O43236 478 aa24.29■■□□□ 1.48
SF1-221ENST00000633899 ZNF654Q8IZM8 581 aa24.29■■□□□ 1.48
SF1-221ENST00000633899 CTCFLQ8NI51 663 aaPredicted RBP24.29■■□□□ 1.48
SF1-221ENST00000633899 PALM3A6NDB9 673 aaPredicted RBP24.28■■□□□ 1.48
SF1-221ENST00000633899 DDAH1O94760 285 aa24.28■■□□□ 1.48
SF1-221ENST00000633899 CNTN2Q02246 1040 aa24.28■■□□□ 1.48
SF1-221ENST00000633899 TROAPQ12815 778 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms