RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 CPVLQ9H3G5 476 aa11.47□□□□□ -0.57
SOX2-OT-244ENST00000627738 GGA3Q9NZ52 723 aa11.47□□□□□ -0.57
SOX2-OT-244ENST00000627738 VPS54Q9P1Q0 977 aa11.47□□□□□ -0.57
SOX2-OT-244ENST00000627738 ZBTB21Q9ULJ3 1066 aa11.47□□□□□ -0.57
SOX2-OT-244ENST00000627738 KCNJ14Q9UNX9 436 aa11.47□□□□□ -0.57
SOX2-OT-244ENST00000627738 MYH6P13533 1939 aa11.47□□□□□ -0.57
SOX2-OT-244ENST00000627738 MYH4Q9Y623 1939 aa11.47□□□□□ -0.57
SOX2-OT-244ENST00000627738 CYTH3O43739 400 aa11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 MMP1P03956 469 aa11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 SCG2P13521 617 aa11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 XBP1P17861 261 aa11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 PFKFB3Q16875 520 aaPredicted RBP11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 ASPRV1Q53RT3 343 aa11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 NBPF12Q5TAG4 269 aaPredicted RBP11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 TMEM87AQ8NBN3 555 aa11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 PXYLP1Q8TE99 480 aa11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 WNT2BQ93097 391 aa11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 SHISA4Q96DD7 197 aa11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 ZBED2Q9BTP6 218 aa11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 SPZ1Q9BXG8 430 aa11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 UBA5Q9GZZ9 404 aa11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 GPCPD1Q9NPB8 672 aa11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 ADARB2Q9NS39 739 aaKnown RBP11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 TFIP11Q9UBB9 837 aaKnown RBP11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 TSKSQ9UJT2 592 aa11.46□□□□□ -0.57
SOX2-OT-244ENST00000627738 TCHHQ07283 1943 aa11.46□□□□□ -0.58
SOX2-OT-244ENST00000627738 UTRNP46939 3433 aa11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 BHMG1C9JSJ3 638 aaPredicted RBP11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 RAD21O60216 631 aa11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 SMARCA1P28370 1054 aa11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 CAP2P40123 477 aa11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 ZNF543Q08ER8 600 aa11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 GNL2Q13823 731 aaKnown RBP11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 SAFBQ15424 915 aaKnown RBP eCLIP11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 CSPP1Q1MSJ5 1256 aa11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 CCDC96Q2M329 555 aa11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 SKOR2Q2VWA4 1001 aaPredicted RBP11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 PRAMEF18Q5VWM3 479 aa11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 SLFN13Q68D06 897 aa11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 THSD4Q6ZMP0 1018 aa11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 BRAPQ7Z569 592 aa11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 ZNF396Q96N95 335 aaPredicted RBP11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 REPIN1Q9BWE0 567 aaKnown RBP11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 SLC4A5Q9BY07 1137 aa11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 VAT1LQ9HCJ6 419 aa11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.45□□□□□ -0.58
SOX2-OT-244ENST00000627738 A0A1W2PRG0 241 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 PHF20L1A8MW92 1017 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 BTBD18B2RXH4 712 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 F5H6K3 240 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 GADD45BO75293 160 aaPredicted RBP11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 VEGFAP15692 232 aaPredicted RBP11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 ECE1P42892 770 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 CEBPZQ03701 1054 aaKnown RBP11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 KLRC3Q07444 240 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 PROX2Q3B8N5 592 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 GPATCH4Q5T3I0 446 aaKnown RBP11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 MYSM1Q5VVJ2 828 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 DCAF15Q66K64 600 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 TTBK2Q6IQ55 1244 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 NUDT18Q6ZVK8 323 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 KCTD1Q719H9 257 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 DIS3L2Q8IYB7 885 aaKnown RBP11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 GMCL1P1Q8NEA9 526 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 DCAF4Q8WV16 495 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 GPKOWQ92917 476 aaPredicted RBP eCLIP11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 RRP36Q96EU6 259 aaKnown RBP11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 USP28Q96RU2 1077 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 PIGSQ96S52 555 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 PHF20Q9BVI0 1012 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 RIOX1Q9H6W3 641 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 ARHGEF10LQ9HCE6 1279 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 CFAP45Q9UL16 551 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 PNMA3Q9UL41 463 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 ISY1Q9ULR0 285 aaKnown RBP11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 PPP2R3BQ9Y5P8 575 aa11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 DDX49Q9Y6V7 483 aaKnown RBP11.44□□□□□ -0.58
SOX2-OT-244ENST00000627738 MYH15Q9Y2K3 1946 aa11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 PITPNM2Q9BZ72 1349 aa11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 ZC3H4Q9UPT8 1303 aaKnown RBP11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 BAZ2BQ9UIF8 2168 aaKnown RBP11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 NDUFB10O96000 172 aa11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 ASNSP08243 561 aa11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 U2AF2P26368 475 aaKnown RBP eCLIP11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 KRT2P35908 639 aa11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 SLC1A4P43007 532 aa11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 WWC2Q6AWC2 1192 aa11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 ATL3Q6DD88 541 aa11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 HOMER1Q86YM7 354 aa11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 GPT2Q8TD30 523 aa11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 ACER1Q8TDN7 264 aa11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 LEO1Q8WVC0 666 aaPredicted RBP11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 SPATA32Q96LK8 384 aa11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 ZNF341Q9BYN7 854 aa11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 FTOQ9C0B1 505 aaKnown RBP eCLIP11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 SCAND2PQ9GZW5 306 aaPredicted RBP11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 FOXP1Q9H334 677 aaPredicted RBP11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 SYNPO2Q9UMS6 1093 aa11.43□□□□□ -0.58
SOX2-OT-244ENST00000627738 ELP1O95163 1332 aa11.42□□□□□ -0.58
SOX2-OT-244ENST00000627738 GLTPD2A6NH11 291 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms