RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ATXN2Q99700 1313 aaKnown RBP15.76■□□□□ 0.11
LDB3-209ENST00000623056 COL5A2P05997 1499 aaPredicted RBP15.76■□□□□ 0.11
LDB3-209ENST00000623056 PRPF3O43395 683 aaKnown RBP15.76■□□□□ 0.11
LDB3-209ENST00000623056 SLC7A5Q01650 507 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 KIF5AQ12840 1032 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 MAP3K12Q12852 859 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 NPY5RQ15761 445 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 ZNF572Q7Z3I7 529 aaPredicted RBP15.76■□□□□ 0.11
LDB3-209ENST00000623056 SPATA5Q8NB90 893 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 CXorf56Q9H5V9 222 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 IQSEC3Q9UPP2 1182 aaPredicted RBP15.76■□□□□ 0.11
LDB3-209ENST00000623056 CAPN7Q9Y6W3 813 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 MYH2Q9UKX2 1941 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 ABCA3Q99758 1704 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 RTL9Q8NET4 1388 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 TNKSO95271 1327 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 RASSF10A6NK89 507 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 B4DLN1 442 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 NDUFAB1O14561 156 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 PLEKHA8P1O95397 391 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 SRGNP10124 158 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 TRIM21P19474 475 aaKnown RBP15.76■□□□□ 0.11
LDB3-209ENST00000623056 MAP2K2P36507 400 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 DNM2P50570 870 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 EPHB4P54760 987 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 ITIH3Q06033 890 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 PDCLQ13371 301 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 SF3B2Q13435 895 aaKnown RBP15.76■□□□□ 0.11
LDB3-209ENST00000623056 SEC23AQ15436 765 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 ALS2CLQ60I27 953 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 B4GALNT4Q76KP1 1039 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 SMCR8Q8TEV9 937 aaPredicted RBP15.76■□□□□ 0.11
LDB3-209ENST00000623056 RUFY1Q96T51 708 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 THAP9Q9H5L6 903 aa15.76■□□□□ 0.11
LDB3-209ENST00000623056 ANKRD18BA2A2Z9 1011 aa15.75■□□□□ 0.11
LDB3-209ENST00000623056 FNTAP49354 379 aa15.75■□□□□ 0.11
LDB3-209ENST00000623056 KLK7P49862 253 aa15.75■□□□□ 0.11
LDB3-209ENST00000623056 VAV2P52735 878 aa15.75■□□□□ 0.11
LDB3-209ENST00000623056 SPATA4Q8NEY3 305 aa15.75■□□□□ 0.11
LDB3-209ENST00000623056 RNF41Q9H4P4 317 aaPredicted RBP15.75■□□□□ 0.11
LDB3-209ENST00000623056 EXOC1Q9NV70 894 aa15.75■□□□□ 0.11
LDB3-209ENST00000623056 LRWD1Q9UFC0 647 aa15.75■□□□□ 0.11
LDB3-209ENST00000623056 A6NNZ2 444 aa15.74■□□□□ 0.11
LDB3-209ENST00000623056 HSF2BPO75031 334 aa15.74■□□□□ 0.11
LDB3-209ENST00000623056 MATR3P43243 847 aaKnown RBP eCLIP15.74■□□□□ 0.11
LDB3-209ENST00000623056 ZBED6P86452 979 aa15.74■□□□□ 0.11
LDB3-209ENST00000623056 PPP2R5BQ15173 497 aa15.74■□□□□ 0.11
LDB3-209ENST00000623056 TUBB8Q3ZCM7 444 aa15.74■□□□□ 0.11
LDB3-209ENST00000623056 EMBQ6PCB8 327 aa15.74■□□□□ 0.11
LDB3-209ENST00000623056 TRIM47Q96LD4 638 aa15.74■□□□□ 0.11
LDB3-209ENST00000623056 TSGA10Q9BZW7 698 aa15.74■□□□□ 0.11
LDB3-209ENST00000623056 MAGEC2Q9UBF1 373 aaPredicted RBP15.74■□□□□ 0.11
LDB3-209ENST00000623056 CAPN6Q9Y6Q1 641 aa15.74■□□□□ 0.11
LDB3-209ENST00000623056 NHSL1Q5SYE7 1610 aa15.74■□□□□ 0.11
LDB3-209ENST00000623056 ZNF263O14978 683 aa15.74■□□□□ 0.11
LDB3-209ENST00000623056 TRIM58Q8NG06 486 aa15.74■□□□□ 0.11
LDB3-209ENST00000623056 NUP58Q9BVL2 599 aa15.74■□□□□ 0.11
LDB3-209ENST00000623056 STIM2Q9P246 746 aa15.74■□□□□ 0.11
LDB3-209ENST00000623056 NUTM2BA6NNL0 878 aaPredicted RBP15.73■□□□□ 0.11
LDB3-209ENST00000623056 NUTM2EB1AL46 878 aaPredicted RBP15.73■□□□□ 0.11
LDB3-209ENST00000623056 MYO1FO00160 1098 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 KIAA0754O94854 1291 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 CHRM1P11229 460 aaPredicted RBP15.73■□□□□ 0.11
LDB3-209ENST00000623056 GNAT2P19087 354 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 MCM7P33993 719 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 CTSWP56202 376 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 RASGRF1Q13972 1273 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 CCDC96Q2M329 555 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 SH2D3CQ8N5H7 860 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 OTUD6BQ8N6M0 293 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 CAVIN3Q969G5 261 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 CABS1Q96KC9 395 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 TACC1O75410 805 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 FSBPO95073 299 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 STAT6P42226 847 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 HAUS3Q68CZ6 603 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 PIK3AP1Q6ZUJ8 805 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 KRT26Q7Z3Y9 468 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 RETREG2Q8NC44 543 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 ZIM3Q96PE6 472 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 TUBGCP2Q9BSJ2 902 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 MLXIPQ9HAP2 919 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 SMARCAL1Q9NZC9 954 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 PNPLA7Q6ZV29 1317 aa15.73■□□□□ 0.11
LDB3-209ENST00000623056 MEFVO15553 781 aaPredicted RBP15.72■□□□□ 0.11
LDB3-209ENST00000623056 PRLRP16471 622 aa15.72■□□□□ 0.11
LDB3-209ENST00000623056 MMP14P50281 582 aa15.72■□□□□ 0.11
LDB3-209ENST00000623056 ATP1A2P50993 1020 aa15.72■□□□□ 0.11
LDB3-209ENST00000623056 PUM3Q15397 648 aaKnown RBP15.72■□□□□ 0.11
LDB3-209ENST00000623056 SPA17Q15506 151 aa15.72■□□□□ 0.11
LDB3-209ENST00000623056 SPATS2Q86XZ4 545 aaKnown RBP15.72■□□□□ 0.11
LDB3-209ENST00000623056 ENAHQ8N8S7 591 aaPredicted RBP15.72■□□□□ 0.11
LDB3-209ENST00000623056 HELBQ8NG08 1087 aaPredicted RBP15.72■□□□□ 0.11
LDB3-209ENST00000623056 LPIN2Q92539 896 aa15.72■□□□□ 0.11
LDB3-209ENST00000623056 OSBPL9Q96SU4 736 aa15.72■□□□□ 0.11
LDB3-209ENST00000623056 DOCK2Q92608 1830 aa15.72■□□□□ 0.11
LDB3-209ENST00000623056 UBAP1LF5GYI3 381 aa15.72■□□□□ 0.11
LDB3-209ENST00000623056 H0YHG0 523 aa15.72■□□□□ 0.11
LDB3-209ENST00000623056 PSMA7O14818 248 aa15.72■□□□□ 0.11
LDB3-209ENST00000623056 SETQ01105 290 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms