RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 RRP12Q5JTH9 1297 aaKnown RBP24.83■■□□□ 1.57
PMPCA-212ENST00000622209 DEFB123Q8N688 67 aa24.83■■□□□ 1.57
PMPCA-212ENST00000622209 CHMP4CQ96CF2 233 aa24.83■■□□□ 1.57
PMPCA-212ENST00000622209 FEM1BQ9UK73 627 aa24.83■■□□□ 1.57
PMPCA-212ENST00000622209 ISY1Q9ULR0 285 aaKnown RBP24.83■■□□□ 1.57
PMPCA-212ENST00000622209 PGK1P00558 417 aa24.82■■□□□ 1.56
PMPCA-212ENST00000622209 TRIM60Q495X7 471 aa24.82■■□□□ 1.56
PMPCA-212ENST00000622209 SLFN13Q68D06 897 aa24.82■■□□□ 1.56
PMPCA-212ENST00000622209 PRDM5Q9NQX1 630 aaPredicted RBP24.82■■□□□ 1.56
PMPCA-212ENST00000622209 TCP11L1Q9NUJ3 509 aa24.82■■□□□ 1.56
PMPCA-212ENST00000622209 CNPY2Q9Y2B0 182 aa24.82■■□□□ 1.56
PMPCA-212ENST00000622209 ZNF865P0CJ78 1059 aaPredicted RBP24.81■■□□□ 1.56
PMPCA-212ENST00000622209 GPR153Q6NV75 609 aa24.81■■□□□ 1.56
PMPCA-212ENST00000622209 GMCL1P1Q8NEA9 526 aa24.81■■□□□ 1.56
PMPCA-212ENST00000622209 ESR2Q92731 530 aa24.81■■□□□ 1.56
PMPCA-212ENST00000622209 LENG1Q96BZ8 264 aaPredicted RBP24.81■■□□□ 1.56
PMPCA-212ENST00000622209 LSG1Q9H089 658 aaKnown RBP24.81■■□□□ 1.56
PMPCA-212ENST00000622209 SLC38A10Q9HBR0 1119 aa24.81■■□□□ 1.56
PMPCA-212ENST00000622209 IL17RBQ9NRM6 502 aa24.81■■□□□ 1.56
PMPCA-212ENST00000622209 LAMA4Q16363 1823 aa24.81■■□□□ 1.56
PMPCA-212ENST00000622209 ATP2A1O14983 1001 aa24.8■■□□□ 1.56
PMPCA-212ENST00000622209 BMP3P12645 472 aa24.8■■□□□ 1.56
PMPCA-212ENST00000622209 NOVP48745 357 aa24.8■■□□□ 1.56
PMPCA-212ENST00000622209 CNNM2Q9H8M5 875 aa24.8■■□□□ 1.56
PMPCA-212ENST00000622209 TMEM232C9JQI7 657 aa24.79■■□□□ 1.56
PMPCA-212ENST00000622209 RNF180Q86T96 592 aa24.79■■□□□ 1.56
PMPCA-212ENST00000622209 KRT23Q9C075 422 aa24.79■■□□□ 1.56
PMPCA-212ENST00000622209 PHF24Q9UPV7 400 aa24.79■■□□□ 1.56
PMPCA-212ENST00000622209 RBM8AQ9Y5S9 174 aaKnown RBP24.79■■□□□ 1.56
PMPCA-212ENST00000622209 NEDD4P46934 1319 aa24.79■■□□□ 1.56
PMPCA-212ENST00000622209 FRMPD3Q5JV73 1810 aa24.78■■□□□ 1.56
PMPCA-212ENST00000622209 DNAJC25-GNG10A0A024R161 153 aa24.78■■□□□ 1.56
PMPCA-212ENST00000622209 SNAI1O95863 264 aaPredicted RBP24.78■■□□□ 1.56
PMPCA-212ENST00000622209 CYP21A2P08686 494 aa24.78■■□□□ 1.56
PMPCA-212ENST00000622209 AKR1A1P14550 325 aa24.78■■□□□ 1.56
PMPCA-212ENST00000622209 SNX17Q15036 470 aa24.78■■□□□ 1.56
PMPCA-212ENST00000622209 ANKRD35Q8N283 1001 aa24.78■■□□□ 1.56
PMPCA-212ENST00000622209 ANO2Q9NQ90 1003 aa24.78■■□□□ 1.56
PMPCA-212ENST00000622209 STX8Q9UNK0 236 aa24.78■■□□□ 1.56
PMPCA-212ENST00000622209 NMT2O60551 498 aa24.77■■□□□ 1.56
PMPCA-212ENST00000622209 TLE2Q04725 743 aa24.77■■□□□ 1.56
PMPCA-212ENST00000622209 SH3RF1Q7Z6J0 888 aa24.77■■□□□ 1.56
PMPCA-212ENST00000622209 TTC14Q96N46 770 aa24.77■■□□□ 1.56
PMPCA-212ENST00000622209 HOMER2Q9NSB8 354 aa24.77■■□□□ 1.56
PMPCA-212ENST00000622209 ZHX1Q9UKY1 873 aaPredicted RBP24.77■■□□□ 1.56
PMPCA-212ENST00000622209 FAM184BQ9ULE4 1060 aa24.77■■□□□ 1.56
PMPCA-212ENST00000622209 PARP14Q460N5 1801 aa24.77■■□□□ 1.56
PMPCA-212ENST00000622209 MCCP23508 829 aa24.76■■□□□ 1.55
PMPCA-212ENST00000622209 IKQ13123 557 aaPredicted RBP24.76■■□□□ 1.55
PMPCA-212ENST00000622209 CCDC178Q5BJE1 867 aa24.76■■□□□ 1.55
PMPCA-212ENST00000622209 MSL3Q8N5Y2 521 aaKnown RBP24.76■■□□□ 1.55
PMPCA-212ENST00000622209 SLC17A8Q8NDX2 589 aa24.76■■□□□ 1.55
PMPCA-212ENST00000622209 BADQ92934 168 aa24.76■■□□□ 1.55
PMPCA-212ENST00000622209 PDLIM7Q9NR12 457 aa24.76■■□□□ 1.55
PMPCA-212ENST00000622209 COL11A1P12107 1806 aaPredicted RBP24.75■■□□□ 1.55
PMPCA-212ENST00000622209 TRIM43BA6NCK2 446 aa24.75■■□□□ 1.55
PMPCA-212ENST00000622209 B4E1Z4 1266 aa24.75■■□□□ 1.55
PMPCA-212ENST00000622209 KDM4AO75164 1064 aa24.75■■□□□ 1.55
PMPCA-212ENST00000622209 SLC1A4P43007 532 aa24.75■■□□□ 1.55
PMPCA-212ENST00000622209 TRDNQ13061 729 aa24.75■■□□□ 1.55
PMPCA-212ENST00000622209 MAMDC4Q6UXC1 1216 aa24.75■■□□□ 1.55
PMPCA-212ENST00000622209 IQCA1Q86XH1 822 aa24.75■■□□□ 1.55
PMPCA-212ENST00000622209 CHST13Q8NET6 341 aa24.75■■□□□ 1.55
PMPCA-212ENST00000622209 TRIM43Q96BQ3 446 aaPredicted RBP24.75■■□□□ 1.55
PMPCA-212ENST00000622209 FBXO40Q9UH90 709 aa24.75■■□□□ 1.55
PMPCA-212ENST00000622209 SYNGAP1Q96PV0 1343 aa24.75■■□□□ 1.55
PMPCA-212ENST00000622209 COL6A3P12111 3177 aa24.75■■□□□ 1.55
PMPCA-212ENST00000622209 OAZ1P54368 228 aa24.74■■□□□ 1.55
PMPCA-212ENST00000622209 C1orf53Q5VUE5 145 aa24.74■■□□□ 1.55
PMPCA-212ENST00000622209 CHURC1Q8WUH1 139 aa24.74■■□□□ 1.55
PMPCA-212ENST00000622209 MTMR10Q9NXD2 777 aa24.74■■□□□ 1.55
PMPCA-212ENST00000622209 ZSWIM5Q9P217 1185 aa24.74■■□□□ 1.55
PMPCA-212ENST00000622209 MTMR7Q9Y216 660 aa24.74■■□□□ 1.55
PMPCA-212ENST00000622209 MYH4Q9Y623 1939 aa24.73■■□□□ 1.55
PMPCA-212ENST00000622209 A0A1W2PQ45 241 aaPredicted RBP24.73■■□□□ 1.55
PMPCA-212ENST00000622209 A0A1W2PQY0 241 aa24.73■■□□□ 1.55
PMPCA-212ENST00000622209 ADAMTS4O75173 837 aa24.73■■□□□ 1.55
PMPCA-212ENST00000622209 TOP1P11387 765 aaKnown RBP24.73■■□□□ 1.55
PMPCA-212ENST00000622209 STAT2P52630 851 aa24.73■■□□□ 1.55
PMPCA-212ENST00000622209 SNAP25P60880 206 aa24.73■■□□□ 1.55
PMPCA-212ENST00000622209 ACVR2BQ13705 512 aa24.73■■□□□ 1.55
PMPCA-212ENST00000622209 NECTIN1Q15223 517 aa24.73■■□□□ 1.55
PMPCA-212ENST00000622209 SHHQ15465 462 aa24.73■■□□□ 1.55
PMPCA-212ENST00000622209 KCTD1Q719H9 257 aa24.73■■□□□ 1.55
PMPCA-212ENST00000622209 ZNF467Q7Z7K2 595 aaPredicted RBP24.73■■□□□ 1.55
PMPCA-212ENST00000622209 DGKHQ86XP1 1220 aa24.73■■□□□ 1.55
PMPCA-212ENST00000622209 GMCL1Q96IK5 515 aa24.73■■□□□ 1.55
PMPCA-212ENST00000622209 AGBL1Q96MI9 1066 aa24.73■■□□□ 1.55
PMPCA-212ENST00000622209 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.73■■□□□ 1.55
PMPCA-212ENST00000622209 LAMA2P24043 3122 aaKnown RBP24.72■■□□□ 1.55
PMPCA-212ENST00000622209 SYNRGQ9UMZ2 1314 aa24.72■■□□□ 1.55
PMPCA-212ENST00000622209 E7EWF7 191 aa24.72■■□□□ 1.55
PMPCA-212ENST00000622209 CNTN2Q02246 1040 aa24.72■■□□□ 1.55
PMPCA-212ENST00000622209 FAM160B2Q86V87 743 aa24.72■■□□□ 1.55
PMPCA-212ENST00000622209 FGD4Q96M96 766 aa24.72■■□□□ 1.55
PMPCA-212ENST00000622209 PQBP1O60828 265 aaKnown RBP24.71■■□□□ 1.55
PMPCA-212ENST00000622209 FDX1P10109 184 aa24.71■■□□□ 1.55
PMPCA-212ENST00000622209 ACLYP53396 1101 aa24.71■■□□□ 1.55
PMPCA-212ENST00000622209 IRX5P78411 483 aaPredicted RBP24.71■■□□□ 1.55
PMPCA-212ENST00000622209 KCNA10Q16322 511 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms