RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 ADORA2AP29274 412 aa21.33■■□□□ 1.01
LITAF-220ENST00000620789 STAG2Q8N3U4 1231 aa21.33■■□□□ 1.01
LITAF-220ENST00000620789 ZNF333Q96JL9 665 aa21.33■■□□□ 1.01
LITAF-220ENST00000620789 AGBL1Q96MI9 1066 aa21.33■■□□□ 1.01
LITAF-220ENST00000620789 TCEANC2Q96MN5 208 aa21.33■■□□□ 1.01
LITAF-220ENST00000620789 APBA2Q99767 749 aa21.33■■□□□ 1.01
LITAF-220ENST00000620789 PALM3A6NDB9 673 aaPredicted RBP21.32■■□□□ 1
LITAF-220ENST00000620789 KLRF2D3W0D1 207 aa21.32■■□□□ 1
LITAF-220ENST00000620789 ICAM1P05362 532 aa21.32■■□□□ 1
LITAF-220ENST00000620789 BLOC1S2Q6QNY1 142 aa21.32■■□□□ 1
LITAF-220ENST00000620789 SGMS1Q86VZ5 419 aa21.32■■□□□ 1
LITAF-220ENST00000620789 ADGRF4Q8IZF3 695 aa21.32■■□□□ 1
LITAF-220ENST00000620789 CHST13Q8NET6 341 aa21.32■■□□□ 1
LITAF-220ENST00000620789 MMP19Q99542 508 aa21.32■■□□□ 1
LITAF-220ENST00000620789 MAP3K14Q99558 947 aa21.32■■□□□ 1
LITAF-220ENST00000620789 FBXO40Q9UH90 709 aa21.32■■□□□ 1
LITAF-220ENST00000620789 CCDC85CA6NKD9 419 aa21.31■■□□□ 1
LITAF-220ENST00000620789 HOXC6P09630 235 aa21.31■■□□□ 1
LITAF-220ENST00000620789 CPA1P15085 419 aa21.31■■□□□ 1
LITAF-220ENST00000620789 KCTD2Q14681 263 aa21.31■■□□□ 1
LITAF-220ENST00000620789 TKFCQ3LXA3 575 aa21.31■■□□□ 1
LITAF-220ENST00000620789 C8orf34Q49A92 452 aa21.31■■□□□ 1
LITAF-220ENST00000620789 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.31■■□□□ 1
LITAF-220ENST00000620789 TRMT44Q8IYL2 757 aaKnown RBP21.31■■□□□ 1
LITAF-220ENST00000620789 NUP133Q8WUM0 1156 aa21.31■■□□□ 1
LITAF-220ENST00000620789 MYL10Q9BUA6 226 aa21.31■■□□□ 1
LITAF-220ENST00000620789 CCPG1Q9ULG6 757 aa21.31■■□□□ 1
LITAF-220ENST00000620789 SLC12A7Q9Y666 1083 aa21.31■■□□□ 1
LITAF-220ENST00000620789 SEC24BO95487 1268 aa21.3■■□□□ 1
LITAF-220ENST00000620789 CASTP20810 708 aaKnown RBP21.3■■□□□ 1
LITAF-220ENST00000620789 RPS6KB1P23443 525 aa21.3■■□□□ 1
LITAF-220ENST00000620789 DPP9Q86TI2 863 aa21.3■■□□□ 1
LITAF-220ENST00000620789 TRIB2Q92519 343 aa21.3■■□□□ 1
LITAF-220ENST00000620789 HOMER2Q9NSB8 354 aa21.3■■□□□ 1
LITAF-220ENST00000620789 RNF146Q9NTX7 359 aa21.3■■□□□ 1
LITAF-220ENST00000620789 BIN2Q9UBW5 565 aaPredicted RBP21.3■■□□□ 1
LITAF-220ENST00000620789 PNMA2Q9UL42 364 aa21.3■■□□□ 1
LITAF-220ENST00000620789 DHX16O60231 1041 aaKnown RBP21.29■■□□□ 1
LITAF-220ENST00000620789 COBLO75128 1261 aa21.29■■□□□ 1
LITAF-220ENST00000620789 HMGCRP04035 888 aa21.29■■□□□ 1
LITAF-220ENST00000620789 INHAP05111 366 aa21.29■■□□□ 1
LITAF-220ENST00000620789 CALM1P0DP23 149 aa21.29■■□□□ 1
LITAF-220ENST00000620789 CALM2P0DP24 149 aa21.29■■□□□ 1
LITAF-220ENST00000620789 CALM3P0DP25 149 aa21.29■■□□□ 1
LITAF-220ENST00000620789 ALAS1P13196 640 aa21.29■■□□□ 1
LITAF-220ENST00000620789 UBXN2AP68543 259 aa21.29■■□□□ 1
LITAF-220ENST00000620789 CDC37Q16543 378 aaPredicted RBP21.29■■□□□ 1
LITAF-220ENST00000620789 CCL14Q16627 93 aa21.29■■□□□ 1
LITAF-220ENST00000620789 CTCFLQ8NI51 663 aaPredicted RBP21.29■■□□□ 1
LITAF-220ENST00000620789 NPLOC4Q8TAT6 608 aa21.29■■□□□ 1
LITAF-220ENST00000620789 TRERF1Q96PN7 1200 aa21.29■■□□□ 1
LITAF-220ENST00000620789 ACAD9Q9H845 621 aa21.29■■□□□ 1
LITAF-220ENST00000620789 JMJD4Q9H9V9 463 aa21.29■■□□□ 1
LITAF-220ENST00000620789 SLC5A4Q9NY91 659 aa21.29■■□□□ 1
LITAF-220ENST00000620789 KIF5BP33176 963 aa21.28■■□□□ 1
LITAF-220ENST00000620789 FGD1P98174 961 aa21.28■■□□□ 1
LITAF-220ENST00000620789 TM6SF1Q9BZW5 370 aa21.28■■□□□ 1
LITAF-220ENST00000620789 ZSWIM6Q9HCJ5 1215 aa21.28■■□□□ 1
LITAF-220ENST00000620789 VAT1LQ9HCJ6 419 aa21.28■■□□□ 1
LITAF-220ENST00000620789 ZNFX1Q9P2E3 1918 aaKnown RBP21.27■■□□□ 1
LITAF-220ENST00000620789 PGK2P07205 417 aa21.27■■□□□ 1
LITAF-220ENST00000620789 TAL1P17542 331 aaPredicted RBP21.27■■□□□ 1
LITAF-220ENST00000620789 RXRAP19793 462 aa21.27■■□□□ 1
LITAF-220ENST00000620789 ANAPC15P60006 121 aa21.27■■□□□ 1
LITAF-220ENST00000620789 APOA5Q6Q788 366 aa21.27■■□□□ 1
LITAF-220ENST00000620789 SYNE3Q6ZMZ3 975 aa21.27■■□□□ 1
LITAF-220ENST00000620789 Q6ZUG5 572 aa21.27■■□□□ 1
LITAF-220ENST00000620789 RUFY3Q7L099 469 aa21.27■■□□□ 1
LITAF-220ENST00000620789 ANKRD35Q8N283 1001 aa21.27■■□□□ 1
LITAF-220ENST00000620789 FBXL16Q8N461 479 aa21.27■■□□□ 1
LITAF-220ENST00000620789 DDX11Q96FC9 970 aa21.27■■□□□ 1
LITAF-220ENST00000620789 MYCP01106 439 aaPredicted RBP21.26■□□□□ 0.99
LITAF-220ENST00000620789 SLC35G1Q2M3R5 365 aa21.26■□□□□ 0.99
LITAF-220ENST00000620789 QRICH1Q2TAL8 776 aa21.26■□□□□ 0.99
LITAF-220ENST00000620789 MUM1L1Q5H9M0 696 aa21.26■□□□□ 0.99
LITAF-220ENST00000620789 MICU3Q86XE3 530 aa21.26■□□□□ 0.99
LITAF-220ENST00000620789 MTMR8Q96EF0 704 aa21.26■□□□□ 0.99
LITAF-220ENST00000620789 RIOX1Q9H6W3 641 aa21.26■□□□□ 0.99
LITAF-220ENST00000620789 FLRT1Q9NZU1 646 aa21.26■□□□□ 0.99
LITAF-220ENST00000620789 BRPF3Q9ULD4 1205 aa21.26■□□□□ 0.99
LITAF-220ENST00000620789 CYP46A1Q9Y6A2 500 aa21.26■□□□□ 0.99
LITAF-220ENST00000620789 DNAJC25-GNG10A0A024R161 153 aa21.25■□□□□ 0.99
LITAF-220ENST00000620789 KLF18A0A0U1RQI7 1052 aa21.25■□□□□ 0.99
LITAF-220ENST00000620789 CAPN15O75808 1086 aa21.25■□□□□ 0.99
LITAF-220ENST00000620789 GNAQP50148 359 aa21.25■□□□□ 0.99
LITAF-220ENST00000620789 TRIM32Q13049 653 aa21.25■□□□□ 0.99
LITAF-220ENST00000620789 MTFR1Q15390 333 aa21.25■□□□□ 0.99
LITAF-220ENST00000620789 ZNF792Q3KQV3 632 aa21.25■□□□□ 0.99
LITAF-220ENST00000620789 OLFML2BQ68BL8 750 aa21.25■□□□□ 0.99
LITAF-220ENST00000620789 RAB11FIP4Q86YS3 637 aa21.25■□□□□ 0.99
LITAF-220ENST00000620789 CCDC144CPQ8IYA2 1237 aa21.25■□□□□ 0.99
LITAF-220ENST00000620789 FANCBQ8NB91 859 aa21.25■□□□□ 0.99
LITAF-220ENST00000620789 BRF1Q92994 677 aa21.25■□□□□ 0.99
LITAF-220ENST00000620789 MAML3Q96JK9 1138 aa21.25■□□□□ 0.99
LITAF-220ENST00000620789 LZTS2Q9BRK4 669 aa21.25■□□□□ 0.99
LITAF-220ENST00000620789 AGXT2Q9BYV1 514 aa21.25■□□□□ 0.99
LITAF-220ENST00000620789 A1CFQ9NQ94 594 aaKnown RBP21.25■□□□□ 0.99
LITAF-220ENST00000620789 DIS3Q9Y2L1 958 aaKnown RBP21.25■□□□□ 0.99
LITAF-220ENST00000620789 SMCHD1A6NHR9 2005 aa21.24■□□□□ 0.99
LITAF-220ENST00000620789 PLXNA1Q9UIW2 1896 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms