RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 OR8K1Q8NGG5 319 aa14.72□□□□□ -0.05
PPP4R3B-206ENST00000616407 CEP95Q96GE4 821 aa14.72□□□□□ -0.05
PPP4R3B-206ENST00000616407 NAA15Q9BXJ9 866 aaKnown RBP14.72□□□□□ -0.05
PPP4R3B-206ENST00000616407 CNTNAP4Q9C0A0 1308 aa14.72□□□□□ -0.05
PPP4R3B-206ENST00000616407 CASP14P31944 242 aa14.72□□□□□ -0.05
PPP4R3B-206ENST00000616407 COPB1P53618 953 aaKnown RBP14.72□□□□□ -0.05
PPP4R3B-206ENST00000616407 NUP58Q9BVL2 599 aa14.72□□□□□ -0.05
PPP4R3B-206ENST00000616407 NT5C3AQ9H0P0 336 aa14.72□□□□□ -0.05
PPP4R3B-206ENST00000616407 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.72□□□□□ -0.05
PPP4R3B-206ENST00000616407 STX10O60499 249 aa14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 GDF11O95390 407 aa14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 RPL13P26373 211 aaKnown RBP14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 RAPGEF1Q13905 1077 aa14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 C3orf67Q6ZVT6 689 aa14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 FBXO11Q86XK2 927 aa14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 VSTM4Q8IW00 320 aa14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 PPP1R13BQ96KQ4 1090 aa14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 PLEKHG2Q9H7P9 1386 aa14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 CLRN2A0PK11 232 aa14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 USP17L5A8MUK1 530 aa14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 KRT13P13646 458 aa14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 PRPF4BQ13523 1007 aaKnown RBP14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 ARL6IP4Q66PJ3 421 aaKnown RBP14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 ENGASEQ8NFI3 743 aa14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 NAPGQ99747 312 aaPredicted RBP14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 CWC15Q9P013 229 aaKnown RBP14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 POLD1P28340 1107 aa14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 TXNRD1Q16881 649 aa14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 XRN1Q8IZH2 1706 aaKnown RBP14.71□□□□□ -0.05
PPP4R3B-206ENST00000616407 SSR1P43307 286 aaKnown RBP14.71□□□□□ -0.06
PPP4R3B-206ENST00000616407 SP4Q02446 784 aa14.71□□□□□ -0.06
PPP4R3B-206ENST00000616407 ERCC6LQ2NKX8 1250 aa14.71□□□□□ -0.06
PPP4R3B-206ENST00000616407 METTL16Q86W50 562 aaKnown RBP14.71□□□□□ -0.06
PPP4R3B-206ENST00000616407 FBXO2Q9UK22 296 aaPredicted RBP14.71□□□□□ -0.06
PPP4R3B-206ENST00000616407 VGLL2Q8N8G2 317 aa14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 CCDC51Q96ER9 411 aa14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 AK8Q96MA6 479 aa14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 CSRNP1Q96S65 589 aa14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 TCRBV5S4A2TA0A5A2 114 aa14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 DDX39AO00148 427 aaKnown RBP14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 DNM2P50570 870 aa14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 ZNF658Q5TYW1 1059 aaPredicted RBP14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 GPBP1Q86WP2 473 aa14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 NIM1KQ8IY84 436 aa14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 KANSL2Q9H9L4 492 aa14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 IGSF3O75054 1194 aa14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 UBE2SQ16763 222 aa14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 TAF3Q5VWG9 929 aa14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 USP49Q70CQ1 688 aa14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 LTN1O94822 1766 aa14.7□□□□□ -0.06
PPP4R3B-206ENST00000616407 NT5C2P49902 561 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 CUL4BQ13620 913 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 HLTFQ14527 1009 aaKnown RBP eCLIP14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 ADGRA1Q86SQ6 560 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 CCDC84Q86UT8 332 aaPredicted RBP14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 TXNRD3Q86VQ6 643 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 SH3GLB2Q9NR46 395 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 FAM196BA6NMK8 535 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 PLCG1P19174 1290 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 RBL2Q08999 1139 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 GRM4Q14833 912 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 MAEAQ7L5Y9 396 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 MYOCDQ8IZQ8 938 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 JAKMIP2Q96AA8 810 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 BICD1Q96G01 975 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 MASTLQ96GX5 879 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 BPIFA3Q9BQP9 254 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 NLRC4Q9NPP4 1024 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 HOMER2Q9NSB8 354 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 PPP4R3AQ6IN85 833 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 TBC1D16Q8TBP0 767 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 TBC1D5Q92609 795 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 AMNQ9BXJ7 453 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 DISC1Q9NRI5 854 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 GDAQ9Y2T3 454 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 CHMP4BP1P59074 171 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 SBK1Q52WX2 424 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 CHURC1Q8WUH1 139 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 LARP4BQ92615 738 aaKnown RBP14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 RIOK1Q9BRS2 568 aaKnown RBP14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 CUEDC2Q9H467 287 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 PI4KBQ9UBF8 816 aa14.69□□□□□ -0.06
PPP4R3B-206ENST00000616407 WTIPA6NIX2 430 aaPredicted RBP14.68□□□□□ -0.06
PPP4R3B-206ENST00000616407 SLC10A5Q5PT55 438 aa14.68□□□□□ -0.06
PPP4R3B-206ENST00000616407 TPH2Q8IWU9 490 aa14.68□□□□□ -0.06
PPP4R3B-206ENST00000616407 FUCA2Q9BTY2 467 aa14.68□□□□□ -0.06
PPP4R3B-206ENST00000616407 GOPCQ9HD26 462 aa14.68□□□□□ -0.06
PPP4R3B-206ENST00000616407 KIAA1024Q9UPX6 916 aa14.68□□□□□ -0.06
PPP4R3B-206ENST00000616407 TNS2Q63HR2 1409 aa14.68□□□□□ -0.06
PPP4R3B-206ENST00000616407 SLC27A3Q5K4L6 730 aa14.68□□□□□ -0.06
PPP4R3B-206ENST00000616407 RRAGAQ7L523 313 aa14.68□□□□□ -0.06
PPP4R3B-206ENST00000616407 TUBGCP2Q9BSJ2 902 aa14.68□□□□□ -0.06
PPP4R3B-206ENST00000616407 PHF20Q9BVI0 1012 aa14.68□□□□□ -0.06
PPP4R3B-206ENST00000616407 KCNF1Q9H3M0 494 aa14.68□□□□□ -0.06
PPP4R3B-206ENST00000616407 NEDD1Q8NHV4 660 aa14.68□□□□□ -0.06
PPP4R3B-206ENST00000616407 DHX36Q9H2U1 1008 aaKnown RBP14.68□□□□□ -0.06
PPP4R3B-206ENST00000616407 KDM3AQ9Y4C1 1321 aa14.68□□□□□ -0.06
PPP4R3B-206ENST00000616407 RAD17O75943 681 aa14.67□□□□□ -0.06
PPP4R3B-206ENST00000616407 CCDC172P0C7W6 258 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms