RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 TSPYL1Q9H0U9 437 aa10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 HERC5Q9UII4 1024 aaKnown RBP10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 COL4A3BPQ9Y5P4 624 aa10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 COL5A2P05997 1499 aaPredicted RBP10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 GNA14O95837 355 aa10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 EEF2P13639 858 aaKnown RBP10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 SNX16P57768 344 aa10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 ZNF577Q9BSK1 485 aa10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 NUP58Q9BVL2 599 aa10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 VPS16Q9H269 839 aa10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 WDR19Q8NEZ3 1342 aa10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 AKR1B15C9JRZ8 316 aaPredicted RBP10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 NELFBQ8WX92 580 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 AK8Q96MA6 479 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 FBXO40Q9UH90 709 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 PNPLA7Q6ZV29 1317 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 CCDC102AQ96A19 550 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 BLZF1Q9H2G9 400 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 HOXC10Q9NYD6 342 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 TNS2Q63HR2 1409 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 HLTFQ14527 1009 aaKnown RBP eCLIP10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 TAF3Q5VWG9 929 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 MYOCDQ8IZQ8 938 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 STAMQ92783 540 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 NOX5Q96PH1 765 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 ADPGKQ9BRR6 497 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 CUEDC2Q9H467 287 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 FEM1BQ9UK73 627 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 ZHX2Q9Y6X8 837 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 POLGP54098 1239 aaPredicted RBP10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 DDX12PQ92771 950 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 COA7Q96BR5 231 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 RTEL1Q9NZ71 1219 aa10.49□□□□□ -0.73
CLTCL1-208ENST00000615606 GTPBP6O43824 516 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 ZEB2O60315 1214 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 MMP1P03956 469 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 TNFAIP3P21580 790 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 IFFO1Q0D2I5 559 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 DEFB132Q7Z7B7 95 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 IGSF22Q8N9C0 903 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 ZNF512BQ96KM6 892 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 NFE2L3Q9Y4A8 694 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 USP17L10C9JJH3 530 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 DPEP1P16444 411 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 LMAN1P49257 510 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 RCAN1P53805 252 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 ZNF354CQ86Y25 554 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 EXOC8Q8IYI6 725 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 SLC17A8Q8NDX2 589 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 TBCKQ8TEA7 893 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 SLF1Q9BQI6 1058 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 NBPF3Q9H094 633 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 KIF1AQ12756 1690 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 LIG4P49917 911 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 MKRN3Q13064 507 aaKnown RBP10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 TFDP1Q14186 410 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 MIS18BP1Q6P0N0 1132 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 FAM178BQ8IXR5 827 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 GADD45BO75293 160 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 P4HA1P13674 534 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 DMP1Q13316 513 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 SEPT2Q15019 361 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 PPP2R5AQ15172 486 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 CCDC84Q86UT8 332 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 TBC1D10CQ8IV04 446 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 MICALL2Q8IY33 904 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 PDCL2Q8N4E4 241 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 TRIML1Q8N9V2 468 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 TMEM47Q9BQJ4 181 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 SUGCTQ9HAC7 445 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 SH3GLB2Q9NR46 395 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 PAXBP1Q9Y5B6 917 aa10.48□□□□□ -0.73
CLTCL1-208ENST00000615606 SORBS3O60504 671 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 PPP6R2O75170 966 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 YWHAEP62258 255 aaKnown RBP10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 SLC39A14Q15043 492 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 CTR9Q6PD62 1173 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 SEPT14Q6ZU15 432 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 RSPH3Q86UC2 560 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 NSUN4Q96CB9 384 aaKnown RBP10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 TSGA10Q9BZW7 698 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 LMBRD1Q9NUN5 540 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 CNOT7Q9UIV1 285 aaKnown RBP10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 A0A1W2PQ27 194 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 A0A1W2PQ64 194 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 A0A1W2PQD8 194 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 K7ENM7 598 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 GYS1P13807 737 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 EZRP15311 586 aaKnown RBP10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 UBXN2AP68543 259 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 FANCCQ00597 558 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 CUL4AQ13619 759 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 SMC1AQ14683 1233 aaKnown RBP10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 TMTC3Q6ZXV5 915 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 COL23A1Q86Y22 540 aaPredicted RBP10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 CCDC117Q8IWD4 279 aaPredicted RBP10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 IQCDQ96DY2 449 aa10.47□□□□□ -0.73
CLTCL1-208ENST00000615606 MTFR1LQ9H019 292 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms