RNA–Protein interactions for RNA: ENST00000613942.2

CRNDE-212, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 2,601 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-212ENST00000613942 CERKLQ49MI3 558 aaPredicted RBP6.88□□□□□ -1.31
CRNDE-212ENST00000613942 ANO1Q5XXA6 986 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 MIGA2Q7L4E1 593 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 TRIM22Q8IYM9 498 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 VPS54Q9P1Q0 977 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.88□□□□□ -1.31
CRNDE-212ENST00000613942 CNTNAP5Q8WYK1 1306 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 STK36Q9NRP7 1315 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 USP27XA6NNY8 438 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 USP17L5A8MUK1 530 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 CYTH3O43739 400 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 DEXIO95424 95 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 PFKFB1P16118 471 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 NOVP48745 357 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 ZNF280AP59817 542 aaPredicted RBP6.88□□□□□ -1.31
CRNDE-212ENST00000613942 GRM4Q14833 912 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 SEPT2Q15019 361 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 MTMR14Q8NCE2 650 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 OXER1Q8TDS5 423 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 FAM151AQ8WW52 585 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 TRIM34Q9BYJ4 488 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 RBM28Q9NW13 759 aaKnown RBP6.88□□□□□ -1.31
CRNDE-212ENST00000613942 ATRNL1Q5VV63 1379 aa6.88□□□□□ -1.31
CRNDE-212ENST00000613942 FRMPD2Q68DX3 1309 aaPredicted RBP6.88□□□□□ -1.31
CRNDE-212ENST00000613942 ARFGEF1Q9Y6D6 1849 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 TOP1P11387 765 aaKnown RBP6.87□□□□□ -1.31
CRNDE-212ENST00000613942 LMNB1P20700 586 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 PSEN1P49768 467 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 PNOCQ13519 176 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 PPP2R5BQ15173 497 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 STX1AQ16623 288 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 NBPF20Q3BBV1 942 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 CCDC178Q5BJE1 867 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 NOM1Q5C9Z4 860 aaKnown RBP6.87□□□□□ -1.31
CRNDE-212ENST00000613942 TATDN1Q6P1N9 297 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 SHC4Q6S5L8 630 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 FOXP4Q8IVH2 680 aaPredicted RBP6.87□□□□□ -1.31
CRNDE-212ENST00000613942 RNF26Q9BY78 433 aaPredicted RBP6.87□□□□□ -1.31
CRNDE-212ENST00000613942 PLIN4Q96Q06 1357 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 KLRF2D3W0D1 207 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 ADAMTS3O15072 1205 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 PRPF3O43395 683 aaKnown RBP6.87□□□□□ -1.31
CRNDE-212ENST00000613942 MYO1BO43795 1136 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 RAD21O60216 631 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 TTLL1O95922 423 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 RPS12P25398 132 aaKnown RBP6.87□□□□□ -1.31
CRNDE-212ENST00000613942 KIF5BP33176 963 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 NT5C2P49902 561 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 AKAP17AQ02040 695 aaKnown RBP6.87□□□□□ -1.31
CRNDE-212ENST00000613942 RASA3Q14644 834 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 NAA30Q147X3 362 aaPredicted RBP6.87□□□□□ -1.31
CRNDE-212ENST00000613942 USP49Q70CQ1 688 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 METTL16Q86W50 562 aaKnown RBP6.87□□□□□ -1.31
CRNDE-212ENST00000613942 SIAH1Q8IUQ4 282 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 PDILTQ8N807 584 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 UBA5Q9GZZ9 404 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.87□□□□□ -1.31
CRNDE-212ENST00000613942 POLR3EQ9NVU0 708 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 TRMT1Q9NXH9 659 aaKnown RBP6.87□□□□□ -1.31
CRNDE-212ENST00000613942 KIAA1468Q9P260 1216 aa6.87□□□□□ -1.31
CRNDE-212ENST00000613942 PALM3A6NDB9 673 aaPredicted RBP6.86□□□□□ -1.31
CRNDE-212ENST00000613942 WNT7AO00755 349 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 DDNO94850 711 aaPredicted RBP6.86□□□□□ -1.31
CRNDE-212ENST00000613942 GH2P01242 217 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 PDHBP11177 359 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 ATP1A3P13637 1013 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 EEF2P13639 858 aaKnown RBP6.86□□□□□ -1.31
CRNDE-212ENST00000613942 LMOD1P29536 600 aaPredicted RBP6.86□□□□□ -1.31
CRNDE-212ENST00000613942 EPS15P42566 896 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 TOB1P50616 345 aaPredicted RBP6.86□□□□□ -1.31
CRNDE-212ENST00000613942 TRIM29Q14134 588 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 PRAMEF18Q5VWM3 479 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 GRAMD1CQ8IYS0 662 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 TRPM4Q8TD43 1214 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 WASF1Q92558 559 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 DPF2Q92785 391 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 GPKOWQ92917 476 aaPredicted RBP eCLIP6.86□□□□□ -1.315e-7■□□□□ 9.3
CRNDE-212ENST00000613942 CCDC17Q96LX7 622 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 VAT1LQ9HCJ6 419 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 RNF181Q9P0P0 153 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 PGAP2Q9UHJ9 254 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 MMP1P03956 469 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 PARP1P09874 1014 aaKnown RBP6.86□□□□□ -1.31
CRNDE-212ENST00000613942 GOLGA8FQ08AF8 430 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 GOLGA8DPQ0D2H9 430 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 PTPAQ15257 358 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 ABCB5Q2M3G0 1257 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 KIF4BQ2VIQ3 1234 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 LONRF3Q496Y0 759 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 EARS2Q5JPH6 523 aaKnown RBP6.86□□□□□ -1.31
CRNDE-212ENST00000613942 TTBK2Q6IQ55 1244 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 CCDC84Q86UT8 332 aaPredicted RBP6.86□□□□□ -1.31
CRNDE-212ENST00000613942 DIS3L2Q8IYB7 885 aaKnown RBP6.86□□□□□ -1.31
CRNDE-212ENST00000613942 MAP3K14Q99558 947 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 GPCPD1Q9NPB8 672 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 SPTLC3Q9NUV7 552 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 HACL1Q9UJ83 578 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 PCNTO95613 3336 aa6.86□□□□□ -1.31
CRNDE-212ENST00000613942 RIOK3O14730 519 aaKnown RBP6.85□□□□□ -1.31
CRNDE-212ENST00000613942 CASP1P29466 404 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms