RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 VAT1LQ9HCJ6 419 aa19.36■□□□□ 0.69
IRF1-211ENST00000613424 IVNS1ABPQ9Y6Y0 642 aa19.36■□□□□ 0.69
IRF1-211ENST00000613424 SLC15A5A6NIM6 579 aa19.35■□□□□ 0.69
IRF1-211ENST00000613424 ICAM1P05362 532 aa19.35■□□□□ 0.69
IRF1-211ENST00000613424 CALM1P0DP23 149 aa19.35■□□□□ 0.69
IRF1-211ENST00000613424 CALM2P0DP24 149 aa19.35■□□□□ 0.69
IRF1-211ENST00000613424 CALM3P0DP25 149 aa19.35■□□□□ 0.69
IRF1-211ENST00000613424 RXRAP19793 462 aa19.35■□□□□ 0.69
IRF1-211ENST00000613424 IRF5Q13568 498 aa19.35■□□□□ 0.69
IRF1-211ENST00000613424 RAB11FIP4Q86YS3 637 aa19.35■□□□□ 0.69
IRF1-211ENST00000613424 CTCFLQ8NI51 663 aaPredicted RBP19.35■□□□□ 0.69
IRF1-211ENST00000613424 USP6NLQ92738 828 aa19.35■□□□□ 0.69
IRF1-211ENST00000613424 IL17RAQ96F46 866 aa19.35■□□□□ 0.69
IRF1-211ENST00000613424 AGXT2Q9BYV1 514 aa19.35■□□□□ 0.69
IRF1-211ENST00000613424 UPF3BQ9BZI7 483 aaKnown RBP19.35■□□□□ 0.69
IRF1-211ENST00000613424 JMJD4Q9H9V9 463 aa19.35■□□□□ 0.69
IRF1-211ENST00000613424 HPS5Q9UPZ3 1129 aa19.35■□□□□ 0.69
IRF1-211ENST00000613424 PLXNB2O15031 1838 aa19.35■□□□□ 0.69
IRF1-211ENST00000613424 DHX16O60231 1041 aaKnown RBP19.34■□□□□ 0.69
IRF1-211ENST00000613424 FCER1AP12319 257 aa19.34■□□□□ 0.69
IRF1-211ENST00000613424 CYP2B6P20813 491 aa19.34■□□□□ 0.69
IRF1-211ENST00000613424 KIF5BP33176 963 aa19.34■□□□□ 0.69
IRF1-211ENST00000613424 APOBRQ0VD83 1088 aa19.34■□□□□ 0.69
IRF1-211ENST00000613424 GRB14Q14449 540 aa19.34■□□□□ 0.69
IRF1-211ENST00000613424 SLC35G1Q2M3R5 365 aa19.34■□□□□ 0.69
IRF1-211ENST00000613424 APOA5Q6Q788 366 aa19.34■□□□□ 0.69
IRF1-211ENST00000613424 NBPF11Q86T75 865 aa19.34■□□□□ 0.69
IRF1-211ENST00000613424 CCDC144CPQ8IYA2 1237 aa19.34■□□□□ 0.69
IRF1-211ENST00000613424 FANCBQ8NB91 859 aa19.34■□□□□ 0.69
IRF1-211ENST00000613424 SOCS4Q8WXH5 440 aa19.34■□□□□ 0.69
IRF1-211ENST00000613424 BRF1Q92994 677 aa19.34■□□□□ 0.69
IRF1-211ENST00000613424 RIOX1Q9H6W3 641 aa19.34■□□□□ 0.69
IRF1-211ENST00000613424 CCPG1Q9ULG6 757 aa19.34■□□□□ 0.69
IRF1-211ENST00000613424 HTTP42858 3142 aa19.34■□□□□ 0.69
IRF1-211ENST00000613424 KLF18A0A0U1RQI7 1052 aa19.33■□□□□ 0.68
IRF1-211ENST00000613424 ALAS1P13196 640 aa19.33■□□□□ 0.68
IRF1-211ENST00000613424 TAL1P17542 331 aaPredicted RBP19.33■□□□□ 0.68
IRF1-211ENST00000613424 MAP2K5Q13163 448 aa19.33■□□□□ 0.68
IRF1-211ENST00000613424 CDC37Q16543 378 aaPredicted RBP19.33■□□□□ 0.68
IRF1-211ENST00000613424 TKFCQ3LXA3 575 aa19.33■□□□□ 0.68
IRF1-211ENST00000613424 MICU3Q86XE3 530 aa19.33■□□□□ 0.68
IRF1-211ENST00000613424 ABRAQ8N0Z2 381 aa19.33■□□□□ 0.68
IRF1-211ENST00000613424 CHST13Q8NET6 341 aa19.33■□□□□ 0.68
IRF1-211ENST00000613424 TRERF1Q96PN7 1200 aa19.33■□□□□ 0.68
IRF1-211ENST00000613424 MMP19Q99542 508 aa19.33■□□□□ 0.68
IRF1-211ENST00000613424 HOMER2Q9NSB8 354 aa19.33■□□□□ 0.68
IRF1-211ENST00000613424 PDRG1Q9NUG6 133 aa19.33■□□□□ 0.68
IRF1-211ENST00000613424 ZBTB43O43298 467 aa19.32■□□□□ 0.68
IRF1-211ENST00000613424 CYTH3O43739 400 aa19.32■□□□□ 0.68
IRF1-211ENST00000613424 ADCY3O60266 1144 aa19.32■□□□□ 0.68
IRF1-211ENST00000613424 XRCC5P13010 732 aaKnown RBP19.32■□□□□ 0.68
IRF1-211ENST00000613424 ADORA2AP29274 412 aa19.32■□□□□ 0.68
IRF1-211ENST00000613424 RGS2P41220 211 aa19.32■□□□□ 0.68
IRF1-211ENST00000613424 GNAQP50148 359 aa19.32■□□□□ 0.68
IRF1-211ENST00000613424 TOB2Q14106 344 aaPredicted RBP19.32■□□□□ 0.68
IRF1-211ENST00000613424 MTMR8Q96EF0 704 aa19.32■□□□□ 0.68
IRF1-211ENST00000613424 RNF146Q9NTX7 359 aa19.32■□□□□ 0.68
IRF1-211ENST00000613424 FBXO40Q9UH90 709 aa19.32■□□□□ 0.68
IRF1-211ENST00000613424 SMCHD1A6NHR9 2005 aa19.32■□□□□ 0.68
IRF1-211ENST00000613424 CENPFP49454 3210 aa19.32■□□□□ 0.68
IRF1-211ENST00000613424 COBLO75128 1261 aa19.31■□□□□ 0.68
IRF1-211ENST00000613424 PLEKHA8P1O95397 391 aa19.31■□□□□ 0.68
IRF1-211ENST00000613424 SMARCA1P28370 1054 aa19.31■□□□□ 0.68
IRF1-211ENST00000613424 GRK4P32298 578 aa19.31■□□□□ 0.68
IRF1-211ENST00000613424 KCTD2Q14681 263 aa19.31■□□□□ 0.68
IRF1-211ENST00000613424 QRICH1Q2TAL8 776 aa19.31■□□□□ 0.68
IRF1-211ENST00000613424 SLC9C1Q4G0N8 1177 aa19.31■□□□□ 0.68
IRF1-211ENST00000613424 DPP9Q86TI2 863 aa19.31■□□□□ 0.68
IRF1-211ENST00000613424 SRBD1Q8N5C6 995 aaKnown RBP19.31■□□□□ 0.68
IRF1-211ENST00000613424 SLAIN1Q8ND83 568 aa19.31■□□□□ 0.68
IRF1-211ENST00000613424 PXYLP1Q8TE99 480 aa19.31■□□□□ 0.68
IRF1-211ENST00000613424 SH3TC2Q8TF17 1288 aa19.31■□□□□ 0.68
IRF1-211ENST00000613424 ABHD8Q96I13 439 aa19.31■□□□□ 0.68
IRF1-211ENST00000613424 LZTS2Q9BRK4 669 aa19.31■□□□□ 0.68
IRF1-211ENST00000613424 C22orf23Q9BZE7 217 aa19.31■□□□□ 0.68
IRF1-211ENST00000613424 PNMA2Q9UL42 364 aa19.31■□□□□ 0.68
IRF1-211ENST00000613424 NAP1L2Q9ULW6 460 aaPredicted RBP19.31■□□□□ 0.68
IRF1-211ENST00000613424 ZNFX1Q9P2E3 1918 aaKnown RBP19.3■□□□□ 0.68
IRF1-211ENST00000613424 HOXC6P09630 235 aa19.3■□□□□ 0.68
IRF1-211ENST00000613424 ELNP15502 786 aa19.3■□□□□ 0.68
IRF1-211ENST00000613424 MUM1L1Q5H9M0 696 aa19.3■□□□□ 0.68
IRF1-211ENST00000613424 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.3■□□□□ 0.68
IRF1-211ENST00000613424 CMTR1Q8N1G2 835 aaKnown RBP19.3■□□□□ 0.68
IRF1-211ENST00000613424 NPLOC4Q8TAT6 608 aa19.3■□□□□ 0.68
IRF1-211ENST00000613424 PIGSQ96S52 555 aa19.3■□□□□ 0.68
IRF1-211ENST00000613424 ACAD9Q9H845 621 aa19.3■□□□□ 0.68
IRF1-211ENST00000613424 BAZ2BQ9UIF8 2168 aaKnown RBP19.3■□□□□ 0.68
IRF1-211ENST00000613424 GOLGA8AA7E2F4 631 aa19.29■□□□□ 0.68
IRF1-211ENST00000613424 GOLGA8BA8MQT2 603 aa19.29■□□□□ 0.68
IRF1-211ENST00000613424 ZBTB5O15062 677 aa19.29■□□□□ 0.68
IRF1-211ENST00000613424 PGK2P07205 417 aa19.29■□□□□ 0.68
IRF1-211ENST00000613424 RCAN1P53805 252 aa19.29■□□□□ 0.68
IRF1-211ENST00000613424 EVCP57679 992 aa19.29■□□□□ 0.68
IRF1-211ENST00000613424 CCL14Q16627 93 aa19.29■□□□□ 0.68
IRF1-211ENST00000613424 RTN1Q16799 776 aa19.29■□□□□ 0.68
IRF1-211ENST00000613424 USH1GQ495M9 461 aa19.29■□□□□ 0.68
IRF1-211ENST00000613424 FBXO11Q86XK2 927 aa19.29■□□□□ 0.68
IRF1-211ENST00000613424 HOMER1Q86YM7 354 aa19.29■□□□□ 0.68
IRF1-211ENST00000613424 ANKRD35Q8N283 1001 aa19.29■□□□□ 0.68
IRF1-211ENST00000613424 DDX11Q96FC9 970 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms