RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 ZNF792Q3KQV3 632 aa19.39■□□□□ 0.69
LINC00240-203ENST00000606878 SHISA4Q96DD7 197 aa19.39■□□□□ 0.69
LINC00240-203ENST00000606878 TRERF1Q96PN7 1200 aa19.39■□□□□ 0.69
LINC00240-203ENST00000606878 RANBP17Q9H2T7 1088 aaKnown RBP19.39■□□□□ 0.69
LINC00240-203ENST00000606878 HOMER2Q9NSB8 354 aa19.39■□□□□ 0.69
LINC00240-203ENST00000606878 TAF6LQ9Y6J9 622 aa19.39■□□□□ 0.69
LINC00240-203ENST00000606878 ZNF536O15090 1300 aa19.39■□□□□ 0.69
LINC00240-203ENST00000606878 CENPFP49454 3210 aa19.39■□□□□ 0.69
LINC00240-203ENST00000606878 SLC27A2O14975 620 aa19.38■□□□□ 0.69
LINC00240-203ENST00000606878 PLXNB2O15031 1838 aa19.38■□□□□ 0.69
LINC00240-203ENST00000606878 ICAM1P05362 532 aa19.38■□□□□ 0.69
LINC00240-203ENST00000606878 GOLGA8HP0CJ92 632 aa19.38■□□□□ 0.69
LINC00240-203ENST00000606878 ALAS1P13196 640 aa19.38■□□□□ 0.69
LINC00240-203ENST00000606878 CNGA1P29973 690 aa19.38■□□□□ 0.69
LINC00240-203ENST00000606878 NECTIN1Q15223 517 aa19.38■□□□□ 0.69
LINC00240-203ENST00000606878 SEC23AQ15436 765 aa19.38■□□□□ 0.69
LINC00240-203ENST00000606878 RNF20Q5VTR2 975 aa19.38■□□□□ 0.69
LINC00240-203ENST00000606878 STOX1Q6ZVD7 989 aa19.38■□□□□ 0.69
LINC00240-203ENST00000606878 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.38■□□□□ 0.69
LINC00240-203ENST00000606878 ACAD9Q9H845 621 aa19.38■□□□□ 0.69
LINC00240-203ENST00000606878 RNF146Q9NTX7 359 aa19.38■□□□□ 0.69
LINC00240-203ENST00000606878 CCPG1Q9ULG6 757 aa19.38■□□□□ 0.69
LINC00240-203ENST00000606878 PARP1P09874 1014 aaKnown RBP19.37■□□□□ 0.69
LINC00240-203ENST00000606878 ASPRV1Q53RT3 343 aa19.37■□□□□ 0.69
LINC00240-203ENST00000606878 CREB3L3Q68CJ9 461 aa19.37■□□□□ 0.69
LINC00240-203ENST00000606878 TINF2Q9BSI4 451 aa19.37■□□□□ 0.69
LINC00240-203ENST00000606878 UBA5Q9GZZ9 404 aa19.37■□□□□ 0.69
LINC00240-203ENST00000606878 A0A0G2JMZ2 1700 aa19.37■□□□□ 0.69
LINC00240-203ENST00000606878 DNAJC25-GNG10A0A024R161 153 aa19.36■□□□□ 0.69
LINC00240-203ENST00000606878 MSCO60682 206 aa19.36■□□□□ 0.69
LINC00240-203ENST00000606878 FARP2O94887 1054 aaPredicted RBP19.36■□□□□ 0.69
LINC00240-203ENST00000606878 WTAPQ15007 396 aa19.36■□□□□ 0.69
LINC00240-203ENST00000606878 CHST3Q7LGC8 479 aa19.36■□□□□ 0.69
LINC00240-203ENST00000606878 MSL3Q8N5Y2 521 aaKnown RBP19.36■□□□□ 0.69
LINC00240-203ENST00000606878 ANKLE1Q8NAG6 615 aa19.36■□□□□ 0.69
LINC00240-203ENST00000606878 NRBP1Q9UHY1 535 aa19.36■□□□□ 0.69
LINC00240-203ENST00000606878 OGDHLQ9ULD0 1010 aa19.36■□□□□ 0.69
LINC00240-203ENST00000606878 PARP14Q460N5 1801 aa19.35■□□□□ 0.69
LINC00240-203ENST00000606878 MCM5P33992 734 aa19.35■□□□□ 0.69
LINC00240-203ENST00000606878 TMEM67Q5HYA8 995 aa19.35■□□□□ 0.69
LINC00240-203ENST00000606878 PRAMEF19Q5SWL8 479 aa19.35■□□□□ 0.69
LINC00240-203ENST00000606878 LHX8Q68G74 356 aa19.35■□□□□ 0.69
LINC00240-203ENST00000606878 MB21D2Q8IYB1 491 aaPredicted RBP19.35■□□□□ 0.69
LINC00240-203ENST00000606878 POTEB2H3BUK9 544 aa19.34■□□□□ 0.69
LINC00240-203ENST00000606878 CYBAP13498 195 aa19.34■□□□□ 0.69
LINC00240-203ENST00000606878 UBE2Q1Q7Z7E8 422 aa19.34■□□□□ 0.69
LINC00240-203ENST00000606878 ZNF467Q7Z7K2 595 aaPredicted RBP19.34■□□□□ 0.69
LINC00240-203ENST00000606878 TMTC2Q8N394 836 aa19.34■□□□□ 0.69
LINC00240-203ENST00000606878 TRPV1Q8NER1 839 aa19.34■□□□□ 0.69
LINC00240-203ENST00000606878 IGDCC4Q8TDY8 1250 aa19.34■□□□□ 0.69
LINC00240-203ENST00000606878 MTA3Q9BTC8 594 aa19.34■□□□□ 0.69
LINC00240-203ENST00000606878 VAT1LQ9HCJ6 419 aa19.34■□□□□ 0.69
LINC00240-203ENST00000606878 DDX20Q9UHI6 824 aaKnown RBP19.34■□□□□ 0.69
LINC00240-203ENST00000606878 COL11A1P12107 1806 aaPredicted RBP19.33■□□□□ 0.69
LINC00240-203ENST00000606878 DHX16O60231 1041 aaKnown RBP19.33■□□□□ 0.68
LINC00240-203ENST00000606878 MAMDC4Q6UXC1 1216 aa19.33■□□□□ 0.68
LINC00240-203ENST00000606878 NECAB2Q7Z6G3 386 aa19.33■□□□□ 0.68
LINC00240-203ENST00000606878 CATIPQ7Z7H3 387 aa19.33■□□□□ 0.68
LINC00240-203ENST00000606878 ADGRF4Q8IZF3 695 aa19.33■□□□□ 0.68
LINC00240-203ENST00000606878 HTATIP2Q9BUP3 242 aa19.33■□□□□ 0.68
LINC00240-203ENST00000606878 CPVLQ9H3G5 476 aa19.33■□□□□ 0.68
LINC00240-203ENST00000606878 A1CFQ9NQ94 594 aaKnown RBP19.33■□□□□ 0.68
LINC00240-203ENST00000606878 CNPY2Q9Y2B0 182 aa19.33■□□□□ 0.68
LINC00240-203ENST00000606878 LAMA4Q16363 1823 aa19.32■□□□□ 0.68
LINC00240-203ENST00000606878 PFASO15067 1338 aa19.32■□□□□ 0.68
LINC00240-203ENST00000606878 KLRF2D3W0D1 207 aa19.32■□□□□ 0.68
LINC00240-203ENST00000606878 SEPT4O43236 478 aa19.32■□□□□ 0.68
LINC00240-203ENST00000606878 PRC1O43663 620 aa19.32■□□□□ 0.68
LINC00240-203ENST00000606878 ANTXR2P58335 489 aa19.32■□□□□ 0.68
LINC00240-203ENST00000606878 MUM1L1Q5H9M0 696 aa19.32■□□□□ 0.68
LINC00240-203ENST00000606878 DPF3Q92784 378 aa19.32■□□□□ 0.68
LINC00240-203ENST00000606878 PAWRQ96IZ0 340 aaKnown RBP19.32■□□□□ 0.68
LINC00240-203ENST00000606878 TMEM87BQ96K49 555 aa19.32■□□□□ 0.68
LINC00240-203ENST00000606878 RBBP6Q7Z6E9 1792 aaKnown RBP19.32■□□□□ 0.68
LINC00240-203ENST00000606878 WDR19Q8NEZ3 1342 aa19.31■□□□□ 0.68
LINC00240-203ENST00000606878 SYNGAP1Q96PV0 1343 aa19.31■□□□□ 0.68
LINC00240-203ENST00000606878 PALM3A6NDB9 673 aaPredicted RBP19.31■□□□□ 0.68
LINC00240-203ENST00000606878 CNTN2Q02246 1040 aa19.31■□□□□ 0.68
LINC00240-203ENST00000606878 TSGA10IPQ3SY00 556 aa19.31■□□□□ 0.68
LINC00240-203ENST00000606878 NSMFQ6X4W1 530 aa19.31■□□□□ 0.68
LINC00240-203ENST00000606878 STAG2Q8N3U4 1231 aa19.31■□□□□ 0.68
LINC00240-203ENST00000606878 FAM133AQ8N9E0 248 aa19.31■□□□□ 0.68
LINC00240-203ENST00000606878 SENP2Q9HC62 589 aa19.31■□□□□ 0.68
LINC00240-203ENST00000606878 ZNFX1Q9P2E3 1918 aaKnown RBP19.3■□□□□ 0.68
LINC00240-203ENST00000606878 REC8O95072 547 aa19.3■□□□□ 0.68
LINC00240-203ENST00000606878 SNAI1O95863 264 aaPredicted RBP19.3■□□□□ 0.68
LINC00240-203ENST00000606878 BAATQ14032 418 aaPredicted RBP19.3■□□□□ 0.68
LINC00240-203ENST00000606878 KRT32Q14532 448 aa19.3■□□□□ 0.68
LINC00240-203ENST00000606878 GRM4Q14833 912 aa19.3■□□□□ 0.68
LINC00240-203ENST00000606878 CDC37Q16543 378 aaPredicted RBP19.3■□□□□ 0.68
LINC00240-203ENST00000606878 NFXL1Q6ZNB6 911 aa19.3■□□□□ 0.68
LINC00240-203ENST00000606878 ARRDC4Q8NCT1 418 aa19.3■□□□□ 0.68
LINC00240-203ENST00000606878 NEK1Q96PY6 1258 aa19.3■□□□□ 0.68
LINC00240-203ENST00000606878 JMJD4Q9H9V9 463 aa19.3■□□□□ 0.68
LINC00240-203ENST00000606878 CYP39A1Q9NYL5 469 aa19.3■□□□□ 0.68
LINC00240-203ENST00000606878 MAD2L2Q9UI95 211 aa19.3■□□□□ 0.68
LINC00240-203ENST00000606878 ASB14A6NK59 587 aa19.29■□□□□ 0.68
LINC00240-203ENST00000606878 TROAPQ12815 778 aa19.29■□□□□ 0.68
LINC00240-203ENST00000606878 NUP133Q8WUM0 1156 aa19.29■□□□□ 0.68
LINC00240-203ENST00000606878 ABHD16BQ9H3Z7 469 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms