RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 CHST13Q8NET6 341 aa32.99■■■□□ 2.87
SSBP4-206ENST00000599699 PAK6Q9NQU5 681 aaPredicted RBP32.99■■■□□ 2.87
SSBP4-206ENST00000599699 ZNF236Q9UL36 1845 aa32.98■■■□□ 2.87
SSBP4-206ENST00000599699 ANKRD35Q8N283 1001 aa32.98■■■□□ 2.87
SSBP4-206ENST00000599699 ZNF536O15090 1300 aa32.98■■■□□ 2.87
SSBP4-206ENST00000599699 SGPL1O95470 568 aa32.97■■■□□ 2.87
SSBP4-206ENST00000599699 TFRCP02786 760 aaKnown RBP32.97■■■□□ 2.87
SSBP4-206ENST00000599699 ALAS1P13196 640 aa32.97■■■□□ 2.87
SSBP4-206ENST00000599699 CYP2C19P33261 490 aa32.97■■■□□ 2.87
SSBP4-206ENST00000599699 WTAPQ15007 396 aa32.97■■■□□ 2.87
SSBP4-206ENST00000599699 TMEM67Q5HYA8 995 aa32.97■■■□□ 2.87
SSBP4-206ENST00000599699 OLFML2BQ68BL8 750 aa32.97■■■□□ 2.87
SSBP4-206ENST00000599699 MB21D2Q8IYB1 491 aaPredicted RBP32.97■■■□□ 2.87
SSBP4-206ENST00000599699 RANBP17Q9H2T7 1088 aaKnown RBP32.97■■■□□ 2.87
SSBP4-206ENST00000599699 RNF146Q9NTX7 359 aa32.97■■■□□ 2.87
SSBP4-206ENST00000599699 CCPG1Q9ULG6 757 aa32.97■■■□□ 2.87
SSBP4-206ENST00000599699 PARP1P09874 1014 aaKnown RBP32.96■■■□□ 2.87
SSBP4-206ENST00000599699 TKFCQ3LXA3 575 aa32.96■■■□□ 2.87
SSBP4-206ENST00000599699 ASPRV1Q53RT3 343 aa32.96■■■□□ 2.87
SSBP4-206ENST00000599699 MAML3Q96JK9 1138 aa32.96■■■□□ 2.87
SSBP4-206ENST00000599699 UBA5Q9GZZ9 404 aa32.96■■■□□ 2.87
SSBP4-206ENST00000599699 ACAD9Q9H845 621 aa32.96■■■□□ 2.87
SSBP4-206ENST00000599699 BRCA2P51587 3418 aa32.96■■■□□ 2.87
SSBP4-206ENST00000599699 SHISA4Q96DD7 197 aa32.95■■■□□ 2.87
SSBP4-206ENST00000599699 TRERF1Q96PN7 1200 aa32.95■■■□□ 2.87
SSBP4-206ENST00000599699 ICAM1P05362 532 aa32.94■■■□□ 2.86
SSBP4-206ENST00000599699 CCND3P30281 292 aaPredicted RBP32.94■■■□□ 2.86
SSBP4-206ENST00000599699 ANTXR2P58335 489 aa32.94■■■□□ 2.86
SSBP4-206ENST00000599699 CPVLQ9H3G5 476 aa32.94■■■□□ 2.86
SSBP4-206ENST00000599699 PRC1O43663 620 aa32.93■■■□□ 2.86
SSBP4-206ENST00000599699 MCM5P33992 734 aa32.93■■■□□ 2.86
SSBP4-206ENST00000599699 ZNF792Q3KQV3 632 aa32.93■■■□□ 2.86
SSBP4-206ENST00000599699 DHX16O60231 1041 aaKnown RBP32.92■■■□□ 2.86
SSBP4-206ENST00000599699 CNGA1P29973 690 aa32.92■■■□□ 2.86
SSBP4-206ENST00000599699 SENP2Q9HC62 589 aa32.92■■■□□ 2.86
SSBP4-206ENST00000599699 DIS3Q9Y2L1 958 aaKnown RBP32.92■■■□□ 2.86
SSBP4-206ENST00000599699 TAL1P17542 331 aaPredicted RBP32.91■■■□□ 2.86
SSBP4-206ENST00000599699 IGDCC4Q8TDY8 1250 aa32.91■■■□□ 2.86
SSBP4-206ENST00000599699 DHX30Q7L2E3 1194 aaKnown RBP eCLIP32.9■■■□□ 2.86
SSBP4-206ENST00000599699 CATIPQ7Z7H3 387 aa32.9■■■□□ 2.86
SSBP4-206ENST00000599699 PNMA2Q9UL42 364 aa32.9■■■□□ 2.86
SSBP4-206ENST00000599699 REC8O95072 547 aa32.89■■■□□ 2.86
SSBP4-206ENST00000599699 MUM1L1Q5H9M0 696 aa32.89■■■□□ 2.86
SSBP4-206ENST00000599699 ADGRF4Q8IZF3 695 aa32.89■■■□□ 2.86
SSBP4-206ENST00000599699 CRISPLD2Q9H0B8 497 aa32.89■■■□□ 2.86
SSBP4-206ENST00000599699 VAT1LQ9HCJ6 419 aa32.89■■■□□ 2.86
SSBP4-206ENST00000599699 DNAJC25-GNG10A0A024R161 153 aa32.88■■■□□ 2.85
SSBP4-206ENST00000599699 IGHA2P01877 340 aa32.88■■■□□ 2.85
SSBP4-206ENST00000599699 CAPN2P17655 700 aa32.88■■■□□ 2.85
SSBP4-206ENST00000599699 NFXL1Q6ZNB6 911 aa32.88■■■□□ 2.85
SSBP4-206ENST00000599699 STAG2Q8N3U4 1231 aa32.88■■■□□ 2.85
SSBP4-206ENST00000599699 TINF2Q9BSI4 451 aa32.88■■■□□ 2.85
SSBP4-206ENST00000599699 ZNFX1Q9P2E3 1918 aaKnown RBP32.88■■■□□ 2.85
SSBP4-206ENST00000599699 KLRF2D3W0D1 207 aa32.87■■■□□ 2.85
SSBP4-206ENST00000599699 POTEB2H3BUK9 544 aa32.87■■■□□ 2.85
SSBP4-206ENST00000599699 FARP2O94887 1054 aaPredicted RBP32.87■■■□□ 2.85
SSBP4-206ENST00000599699 PRAMEF19Q5SWL8 479 aa32.87■■■□□ 2.85
SSBP4-206ENST00000599699 NSMFQ6X4W1 530 aa32.87■■■□□ 2.85
SSBP4-206ENST00000599699 TRPV1Q8NER1 839 aa32.87■■■□□ 2.85
SSBP4-206ENST00000599699 TMEM87BQ96K49 555 aa32.87■■■□□ 2.85
SSBP4-206ENST00000599699 MTA3Q9BTC8 594 aa32.87■■■□□ 2.85
SSBP4-206ENST00000599699 LY9Q9HBG7 655 aa32.87■■■□□ 2.85
SSBP4-206ENST00000599699 A1CFQ9NQ94 594 aaKnown RBP32.87■■■□□ 2.85
SSBP4-206ENST00000599699 GPHNQ9NQX3 736 aaPredicted RBP32.87■■■□□ 2.85
SSBP4-206ENST00000599699 PFASO15067 1338 aa32.86■■■□□ 2.85
SSBP4-206ENST00000599699 CYBAP13498 195 aa32.86■■■□□ 2.85
SSBP4-206ENST00000599699 KRT32Q14532 448 aa32.86■■■□□ 2.85
SSBP4-206ENST00000599699 CDC37Q16543 378 aaPredicted RBP32.86■■■□□ 2.85
SSBP4-206ENST00000599699 RASEFQ8IZ41 740 aa32.86■■■□□ 2.85
SSBP4-206ENST00000599699 NEK1Q96PY6 1258 aa32.86■■■□□ 2.85
SSBP4-206ENST00000599699 MAD2L2Q9UI95 211 aa32.86■■■□□ 2.85
SSBP4-206ENST00000599699 GRM4Q14833 912 aa32.85■■■□□ 2.85
SSBP4-206ENST00000599699 USH1GQ495M9 461 aa32.85■■■□□ 2.85
SSBP4-206ENST00000599699 TMTC2Q8N394 836 aa32.85■■■□□ 2.85
SSBP4-206ENST00000599699 NUP133Q8WUM0 1156 aa32.85■■■□□ 2.85
SSBP4-206ENST00000599699 WDR19Q8NEZ3 1342 aa32.84■■■□□ 2.85
SSBP4-206ENST00000599699 CCDC69A6NI79 296 aa32.84■■■□□ 2.85
SSBP4-206ENST00000599699 SH2B2O14492 632 aaPredicted RBP32.84■■■□□ 2.85
SSBP4-206ENST00000599699 CNTN2Q02246 1040 aa32.84■■■□□ 2.85
SSBP4-206ENST00000599699 COL9A3Q14050 684 aaPredicted RBP32.84■■■□□ 2.85
SSBP4-206ENST00000599699 LRRC2Q9BYS8 371 aa32.84■■■□□ 2.85
SSBP4-206ENST00000599699 DDX20Q9UHI6 824 aaKnown RBP32.84■■■□□ 2.85
SSBP4-206ENST00000599699 CNPY2Q9Y2B0 182 aa32.84■■■□□ 2.85
SSBP4-206ENST00000599699 PALM3A6NDB9 673 aaPredicted RBP32.83■■■□□ 2.85
SSBP4-206ENST00000599699 TROAPQ12815 778 aa32.83■■■□□ 2.85
SSBP4-206ENST00000599699 TSGA10IPQ3SY00 556 aa32.83■■■□□ 2.85
SSBP4-206ENST00000599699 MSL3Q8N5Y2 521 aaKnown RBP32.83■■■□□ 2.85
SSBP4-206ENST00000599699 JMJD4Q9H9V9 463 aa32.83■■■□□ 2.85
SSBP4-206ENST00000599699 MSCO60682 206 aa32.82■■■□□ 2.84
SSBP4-206ENST00000599699 LHX8Q68G74 356 aa32.82■■■□□ 2.84
SSBP4-206ENST00000599699 ZNF467Q7Z7K2 595 aaPredicted RBP32.82■■■□□ 2.84
SSBP4-206ENST00000599699 ZNF654Q8IZM8 581 aa32.82■■■□□ 2.84
SSBP4-206ENST00000599699 CYP39A1Q9NYL5 469 aa32.82■■■□□ 2.84
SSBP4-206ENST00000599699 OGDHLQ9ULD0 1010 aa32.82■■■□□ 2.84
SSBP4-206ENST00000599699 NFIBO00712 420 aa32.81■■■□□ 2.84
SSBP4-206ENST00000599699 QRICH1Q2TAL8 776 aa32.81■■■□□ 2.84
SSBP4-206ENST00000599699 ADCK5Q3MIX3 580 aa32.81■■■□□ 2.84
SSBP4-206ENST00000599699 FAM133AQ8N9E0 248 aa32.81■■■□□ 2.84
SSBP4-206ENST00000599699 ANKLE1Q8NAG6 615 aa32.81■■■□□ 2.84
SSBP4-206ENST00000599699 MYL10Q9BUA6 226 aa32.81■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms