RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 IGDCC4Q8TDY8 1250 aa17.72■□□□□ 0.43
ERCC1-217ENST00000592905 LRRC2Q9BYS8 371 aa17.72■□□□□ 0.43
ERCC1-217ENST00000592905 HOXC6P09630 235 aa17.71■□□□□ 0.43
ERCC1-217ENST00000592905 PARP1P09874 1014 aaKnown RBP17.71■□□□□ 0.43
ERCC1-217ENST00000592905 PRKAR2AP13861 404 aaKnown RBP17.71■□□□□ 0.43
ERCC1-217ENST00000592905 MCM5P33992 734 aa17.71■□□□□ 0.43
ERCC1-217ENST00000592905 COPB2P35606 906 aa17.71■□□□□ 0.43
ERCC1-217ENST00000592905 RGS19P49795 217 aa17.71■□□□□ 0.43
ERCC1-217ENST00000592905 CACNB2Q08289 660 aaPredicted RBP17.71■□□□□ 0.43
ERCC1-217ENST00000592905 SART3Q15020 963 aaKnown RBP17.71■□□□□ 0.43
ERCC1-217ENST00000592905 ADCK5Q3MIX3 580 aa17.71■□□□□ 0.43
ERCC1-217ENST00000592905 GPATCH4Q5T3I0 446 aaKnown RBP17.71■□□□□ 0.43
ERCC1-217ENST00000592905 ABRAQ8N0Z2 381 aa17.71■□□□□ 0.43
ERCC1-217ENST00000592905 STAG2Q8N3U4 1231 aa17.71■□□□□ 0.43
ERCC1-217ENST00000592905 RANBP17Q9H2T7 1088 aaKnown RBP17.71■□□□□ 0.43
ERCC1-217ENST00000592905 VAT1LQ9HCJ6 419 aa17.71■□□□□ 0.43
ERCC1-217ENST00000592905 CYP2C19P33261 490 aa17.7■□□□□ 0.42
ERCC1-217ENST00000592905 TRMT44Q8IYL2 757 aaKnown RBP17.7■□□□□ 0.42
ERCC1-217ENST00000592905 DDX11Q96FC9 970 aa17.7■□□□□ 0.42
ERCC1-217ENST00000592905 TRERF1Q96PN7 1200 aa17.7■□□□□ 0.42
ERCC1-217ENST00000592905 LY9Q9HBG7 655 aa17.7■□□□□ 0.42
ERCC1-217ENST00000592905 RNF146Q9NTX7 359 aa17.7■□□□□ 0.42
ERCC1-217ENST00000592905 CCPG1Q9ULG6 757 aa17.7■□□□□ 0.42
ERCC1-217ENST00000592905 MCM3APO60318 1980 aa17.7■□□□□ 0.42
ERCC1-217ENST00000592905 MKI67P46013 3256 aaKnown RBP17.69■□□□□ 0.42
ERCC1-217ENST00000592905 CCND3P30281 292 aaPredicted RBP17.69■□□□□ 0.42
ERCC1-217ENST00000592905 ASPRV1Q53RT3 343 aa17.69■□□□□ 0.42
ERCC1-217ENST00000592905 MUM1L1Q5H9M0 696 aa17.69■□□□□ 0.42
ERCC1-217ENST00000592905 ADGRF4Q8IZF3 695 aa17.69■□□□□ 0.42
ERCC1-217ENST00000592905 ANKRD35Q8N283 1001 aa17.69■□□□□ 0.42
ERCC1-217ENST00000592905 CHST13Q8NET6 341 aa17.69■□□□□ 0.42
ERCC1-217ENST00000592905 MAML3Q96JK9 1138 aa17.69■□□□□ 0.42
ERCC1-217ENST00000592905 TCEANC2Q96MN5 208 aa17.69■□□□□ 0.42
ERCC1-217ENST00000592905 DEFB118Q96PH6 123 aa17.69■□□□□ 0.42
ERCC1-217ENST00000592905 NEK1Q96PY6 1258 aa17.69■□□□□ 0.42
ERCC1-217ENST00000592905 MYL10Q9BUA6 226 aa17.69■□□□□ 0.42
ERCC1-217ENST00000592905 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.69■□□□□ 0.42
ERCC1-217ENST00000592905 HMX1Q9NP08 348 aaPredicted RBP17.69■□□□□ 0.42
ERCC1-217ENST00000592905 MAD2L2Q9UI95 211 aa17.69■□□□□ 0.42
ERCC1-217ENST00000592905 RPTORQ8N122 1335 aa17.69■□□□□ 0.42
ERCC1-217ENST00000592905 SH2B2O14492 632 aaPredicted RBP17.68■□□□□ 0.42
ERCC1-217ENST00000592905 DHX16O60231 1041 aaKnown RBP17.68■□□□□ 0.42
ERCC1-217ENST00000592905 REC8O95072 547 aa17.68■□□□□ 0.42
ERCC1-217ENST00000592905 ICAM1P05362 532 aa17.68■□□□□ 0.42
ERCC1-217ENST00000592905 GJB1P08034 283 aa17.68■□□□□ 0.42
ERCC1-217ENST00000592905 CPA1P15085 419 aa17.68■□□□□ 0.42
ERCC1-217ENST00000592905 ZNF792Q3KQV3 632 aa17.68■□□□□ 0.42
ERCC1-217ENST00000592905 MAP3K21Q5TCX8 1036 aa17.68■□□□□ 0.42
ERCC1-217ENST00000592905 MFSD14CQ5VZR4 134 aa17.68■□□□□ 0.42
ERCC1-217ENST00000592905 RAB11FIP4Q86YS3 637 aa17.68■□□□□ 0.42
ERCC1-217ENST00000592905 NUP133Q8WUM0 1156 aa17.68■□□□□ 0.42
ERCC1-217ENST00000592905 ACAD9Q9H845 621 aa17.68■□□□□ 0.42
ERCC1-217ENST00000592905 SLC5A4Q9NY91 659 aa17.68■□□□□ 0.42
ERCC1-217ENST00000592905 KLRF2D3W0D1 207 aa17.67■□□□□ 0.42
ERCC1-217ENST00000592905 HSPA4P34932 840 aa17.67■□□□□ 0.42
ERCC1-217ENST00000592905 TROAPQ12815 778 aa17.67■□□□□ 0.42
ERCC1-217ENST00000592905 GRM4Q14833 912 aa17.67■□□□□ 0.42
ERCC1-217ENST00000592905 TSGA10IPQ3SY00 556 aa17.67■□□□□ 0.42
ERCC1-217ENST00000592905 PRAMEF19Q5SWL8 479 aa17.67■□□□□ 0.42
ERCC1-217ENST00000592905 NFXL1Q6ZNB6 911 aa17.67■□□□□ 0.42
ERCC1-217ENST00000592905 CATIPQ7Z7H3 387 aa17.67■□□□□ 0.42
ERCC1-217ENST00000592905 TRPV1Q8NER1 839 aa17.67■□□□□ 0.42
ERCC1-217ENST00000592905 U2AF1L4Q8WU68 220 aaKnown RBP17.67■□□□□ 0.42
ERCC1-217ENST00000592905 SHISA4Q96DD7 197 aa17.67■□□□□ 0.42
ERCC1-217ENST00000592905 PAK6Q9NQU5 681 aaPredicted RBP17.67■□□□□ 0.42
ERCC1-217ENST00000592905 FBXO40Q9UH90 709 aa17.67■□□□□ 0.42
ERCC1-217ENST00000592905 SNX14Q9Y5W7 946 aa17.67■□□□□ 0.42
ERCC1-217ENST00000592905 PALM3A6NDB9 673 aaPredicted RBP17.66■□□□□ 0.42
ERCC1-217ENST00000592905 SGPL1O95470 568 aa17.66■□□□□ 0.42
ERCC1-217ENST00000592905 IGHA2P01877 340 aa17.66■□□□□ 0.42
ERCC1-217ENST00000592905 TFRCP02786 760 aaKnown RBP17.66■□□□□ 0.42
ERCC1-217ENST00000592905 CNGA1P29973 690 aa17.66■□□□□ 0.42
ERCC1-217ENST00000592905 GJA8P48165 433 aa17.66■□□□□ 0.42
ERCC1-217ENST00000592905 CNTN2Q02246 1040 aa17.66■□□□□ 0.42
ERCC1-217ENST00000592905 MLLT1Q03111 559 aaPredicted RBP17.66■□□□□ 0.42
ERCC1-217ENST00000592905 CDC37Q16543 378 aaPredicted RBP17.66■□□□□ 0.42
ERCC1-217ENST00000592905 TKFCQ3LXA3 575 aa17.66■□□□□ 0.42
ERCC1-217ENST00000592905 USH1GQ495M9 461 aa17.66■□□□□ 0.42
ERCC1-217ENST00000592905 OLFML2BQ68BL8 750 aa17.66■□□□□ 0.42
ERCC1-217ENST00000592905 ZNF654Q8IZM8 581 aa17.66■□□□□ 0.42
ERCC1-217ENST00000592905 KCNB2Q92953 911 aa17.66■□□□□ 0.42
ERCC1-217ENST00000592905 TMEM87BQ96K49 555 aa17.66■□□□□ 0.42
ERCC1-217ENST00000592905 JMJD4Q9H9V9 463 aa17.66■□□□□ 0.42
ERCC1-217ENST00000592905 A1CFQ9NQ94 594 aaKnown RBP17.66■□□□□ 0.42
ERCC1-217ENST00000592905 LCTP09848 1927 aa17.65■□□□□ 0.42
ERCC1-217ENST00000592905 DNAJC25-GNG10A0A024R161 153 aa17.65■□□□□ 0.42
ERCC1-217ENST00000592905 CCDC69A6NI79 296 aa17.65■□□□□ 0.42
ERCC1-217ENST00000592905 RXRAP19793 462 aa17.65■□□□□ 0.42
ERCC1-217ENST00000592905 EXOSC10Q01780 885 aaKnown RBP17.65■□□□□ 0.42
ERCC1-217ENST00000592905 KRT32Q14532 448 aa17.65■□□□□ 0.42
ERCC1-217ENST00000592905 SLC35G1Q2M3R5 365 aa17.65■□□□□ 0.42
ERCC1-217ENST00000592905 NSMFQ6X4W1 530 aa17.65■□□□□ 0.42
ERCC1-217ENST00000592905 DHX32Q7L7V1 743 aaKnown RBP17.65■□□□□ 0.42
ERCC1-217ENST00000592905 JAKMIP1Q96N16 626 aaKnown RBP17.65■□□□□ 0.42
ERCC1-217ENST00000592905 PURBQ96QR8 312 aaKnown RBP17.65■□□□□ 0.42
ERCC1-217ENST00000592905 USP26Q9BXU7 913 aa17.65■□□□□ 0.42
ERCC1-217ENST00000592905 PDE4DIPQ5VU43 2346 aa17.64■□□□□ 0.41
ERCC1-217ENST00000592905 NFIBO00712 420 aa17.64■□□□□ 0.41
ERCC1-217ENST00000592905 LIFRP42702 1097 aa17.64■□□□□ 0.41
ERCC1-217ENST00000592905 QRICH1Q2TAL8 776 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms