RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 AK8Q96MA6 479 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 TTYH3Q9C0H2 523 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 BARHL2Q9NY43 387 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 PUF60Q9UHX1 559 aaKnown RBP13.05□□□□□ -0.32
ZNF540-210ENST00000592533 FLT1P17948 1338 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 TTC26A0AVF1 554 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 CTAGE15A4D2H0 777 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 ABL1P00519 1130 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 CTAGE8P0CG41 777 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 SLC35G1Q2M3R5 365 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 TRAPPC11Q7Z392 1133 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 CTAGE6Q86UF2 777 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 CTAGE4Q8IX94 777 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 RETREG2Q8NC44 543 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 LZTS2Q9BRK4 669 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 GBP3Q9H0R5 595 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 TAF1LQ8IZX4 1826 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 STXBP3O00186 592 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 COBLO75128 1261 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 DNM2P50570 870 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 STIM1Q13586 685 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 MYO6Q9UM54 1294 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 NHSQ6T4R5 1651 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 CCDC194A0A1B0GVG4 234 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 PALM3A6NDB9 673 aaPredicted RBP13.04□□□□□ -0.32
ZNF540-210ENST00000592533 PSMA7O14818 248 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 POLR3GO15318 223 aaPredicted RBP13.04□□□□□ -0.32
ZNF540-210ENST00000592533 SRGNP10124 158 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 PPP1R2P41236 205 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 PMS1P54277 932 aaKnown RBP13.04□□□□□ -0.32
ZNF540-210ENST00000592533 TFAP4Q01664 338 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 GPS2Q13227 327 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 TBC1D9BQ66K14 1250 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 WDR59Q6PJI9 974 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 STAG2Q8N3U4 1231 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 GPKOWQ92917 476 aaPredicted RBP eCLIP13.04□□□□□ -0.32
ZNF540-210ENST00000592533 CHP1Q99653 195 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 SLF1Q9BQI6 1058 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 TMEM60Q9H2L4 133 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 MCM9Q9NXL9 1143 aa13.04□□□□□ -0.32
ZNF540-210ENST00000592533 LUC7L2Q9Y383 392 aaKnown RBP13.04□□□□□ -0.32
ZNF540-210ENST00000592533 H3BQF6 201 aa13.03□□□□□ -0.32
ZNF540-210ENST00000592533 CDK17Q00537 523 aa13.03□□□□□ -0.32
ZNF540-210ENST00000592533 ORC2Q13416 577 aaPredicted RBP13.03□□□□□ -0.32
ZNF540-210ENST00000592533 NUP58Q9BVL2 599 aa13.03□□□□□ -0.32
ZNF540-210ENST00000592533 TRIM49BA6NDI0 452 aa13.03□□□□□ -0.32
ZNF540-210ENST00000592533 PPP4CP60510 307 aa13.03□□□□□ -0.32
ZNF540-210ENST00000592533 PAPD7Q5XG87 772 aaKnown RBP13.03□□□□□ -0.32
ZNF540-210ENST00000592533 ZSWIM4Q9H7M6 989 aa13.03□□□□□ -0.32
ZNF540-210ENST00000592533 BTAF1O14981 1849 aa13.02□□□□□ -0.32
ZNF540-210ENST00000592533 ERICH4A6NGS2 130 aa13.02□□□□□ -0.32
ZNF540-210ENST00000592533 CYTH3O43739 400 aa13.02□□□□□ -0.32
ZNF540-210ENST00000592533 USP17L8P0C7I0 530 aa13.02□□□□□ -0.32
ZNF540-210ENST00000592533 HERVK_113P62684 666 aa13.02□□□□□ -0.32
ZNF540-210ENST00000592533 ST5P78524 1137 aa13.02□□□□□ -0.32
ZNF540-210ENST00000592533 FIGNQ5HY92 759 aa13.02□□□□□ -0.32
ZNF540-210ENST00000592533 IQCDQ96DY2 449 aa13.02□□□□□ -0.32
ZNF540-210ENST00000592533 NLRP3Q96P20 1036 aa13.02□□□□□ -0.32
ZNF540-210ENST00000592533 DUSP9Q99956 384 aaKnown RBP13.02□□□□□ -0.32
ZNF540-210ENST00000592533 SPZ1Q9BXG8 430 aa13.02□□□□□ -0.32
ZNF540-210ENST00000592533 ZMYND12Q9H0C1 365 aa13.02□□□□□ -0.32
ZNF540-210ENST00000592533 RC3H1Q5TC82 1133 aaKnown RBP13.02□□□□□ -0.33
ZNF540-210ENST00000592533 ZSCAN29Q8IWY8 852 aaPredicted RBP13.02□□□□□ -0.33
ZNF540-210ENST00000592533 EHBP1Q8NDI1 1231 aa13.02□□□□□ -0.33
ZNF540-210ENST00000592533 LRRC15Q8TF66 581 aa13.02□□□□□ -0.33
ZNF540-210ENST00000592533 C7orf25Q9BPX7 421 aa13.02□□□□□ -0.33
ZNF540-210ENST00000592533 ZCCHC17Q9NP64 241 aaKnown RBP13.02□□□□□ -0.33
ZNF540-210ENST00000592533 NARFQ9UHQ1 456 aa13.02□□□□□ -0.33
ZNF540-210ENST00000592533 A0A1W2PQJ5 194 aa13.02□□□□□ -0.33
ZNF540-210ENST00000592533 EIF3JO75822 258 aaKnown RBP13.02□□□□□ -0.33
ZNF540-210ENST00000592533 SMARCA1P28370 1054 aa13.02□□□□□ -0.33
ZNF540-210ENST00000592533 TM4SF1P30408 202 aa13.02□□□□□ -0.33
ZNF540-210ENST00000592533 UBA7P41226 1012 aa13.02□□□□□ -0.33
ZNF540-210ENST00000592533 KRT83P78385 493 aa13.02□□□□□ -0.33
ZNF540-210ENST00000592533 CCDC170Q8IYT3 715 aa13.02□□□□□ -0.33
ZNF540-210ENST00000592533 RPGRIP1Q96KN7 1286 aa13.02□□□□□ -0.33
ZNF540-210ENST00000592533 PURBQ96QR8 312 aaKnown RBP13.02□□□□□ -0.33
ZNF540-210ENST00000592533 ABCB6Q9NP58 842 aa13.02□□□□□ -0.33
ZNF540-210ENST00000592533 TFCP2L1Q9NZI6 479 aa13.02□□□□□ -0.33
ZNF540-210ENST00000592533 SNED1Q8TER0 1413 aa13.01□□□□□ -0.33
ZNF540-210ENST00000592533 BICDL2A1A5D9 508 aa13.01□□□□□ -0.33
ZNF540-210ENST00000592533 CCNE1P24864 410 aa13.01□□□□□ -0.33
ZNF540-210ENST00000592533 VSNL1P62760 191 aa13.01□□□□□ -0.33
ZNF540-210ENST00000592533 DZIP1Q86YF9 867 aaKnown RBP13.01□□□□□ -0.33
ZNF540-210ENST00000592533 WDR66Q8TBY9 1149 aa13.01□□□□□ -0.33
ZNF540-210ENST00000592533 RASGRP4Q8TDF6 673 aa13.01□□□□□ -0.33
ZNF540-210ENST00000592533 EXOC1Q9NV70 894 aa13.01□□□□□ -0.33
ZNF540-210ENST00000592533 ADAM21Q9UKJ8 722 aa13.01□□□□□ -0.33
ZNF540-210ENST00000592533 MAPK8IP1Q9UQF2 711 aa13.01□□□□□ -0.33
ZNF540-210ENST00000592533 ATAD5Q96QE3 1844 aa13.01□□□□□ -0.33
ZNF540-210ENST00000592533 TULP2O00295 520 aa13.01□□□□□ -0.33
ZNF540-210ENST00000592533 HNRNPH2P55795 449 aaKnown RBP13.01□□□□□ -0.33
ZNF540-210ENST00000592533 INF2Q27J81 1249 aa13.01□□□□□ -0.33
ZNF540-210ENST00000592533 CERS3Q8IU89 383 aa13.01□□□□□ -0.33
ZNF540-210ENST00000592533 FAM114A1Q8IWE2 563 aa13.01□□□□□ -0.33
ZNF540-210ENST00000592533 TRIM47Q96LD4 638 aa13.01□□□□□ -0.33
ZNF540-210ENST00000592533 VIPAS39Q9H9C1 493 aa13.01□□□□□ -0.33
ZNF540-210ENST00000592533 MAGEC2Q9UBF1 373 aaPredicted RBP13.01□□□□□ -0.33
ZNF540-210ENST00000592533 LY75O60449 1722 aa13□□□□□ -0.33
ZNF540-210ENST00000592533 RASSF10A6NK89 507 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms