RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 SLC4A3P48751 1232 aa20.33■□□□□ 0.85
POLR2E-208ENST00000591709 CDK8P49336 464 aa20.33■□□□□ 0.85
POLR2E-208ENST00000591709 ACVR2BQ13705 512 aa20.33■□□□□ 0.85
POLR2E-208ENST00000591709 CCDC144BQ3MJ40 725 aa20.33■□□□□ 0.85
POLR2E-208ENST00000591709 GNASQ5JWF2 1037 aa20.33■□□□□ 0.85
POLR2E-208ENST00000591709 RPAP2Q8IXW5 612 aaPredicted RBP20.33■□□□□ 0.85
POLR2E-208ENST00000591709 NUP88Q99567 741 aaPredicted RBP20.33■□□□□ 0.85
POLR2E-208ENST00000591709 RIPK3Q9Y572 518 aa20.33■□□□□ 0.85
POLR2E-208ENST00000591709 BRWD1Q9NSI6 2320 aa20.33■□□□□ 0.84
POLR2E-208ENST00000591709 CD4P01730 458 aa20.32■□□□□ 0.84
POLR2E-208ENST00000591709 FGBP02675 491 aa20.32■□□□□ 0.84
POLR2E-208ENST00000591709 MYOGP15173 224 aa20.32■□□□□ 0.84
POLR2E-208ENST00000591709 GJA9P57773 515 aa20.32■□□□□ 0.84
POLR2E-208ENST00000591709 SKIV2LQ15477 1246 aaKnown RBP20.32■□□□□ 0.84
POLR2E-208ENST00000591709 DNAJC2Q99543 621 aaKnown RBP20.32■□□□□ 0.84
POLR2E-208ENST00000591709 SLF1Q9BQI6 1058 aa20.32■□□□□ 0.84
POLR2E-208ENST00000591709 HIPK3Q9H422 1215 aa20.32■□□□□ 0.84
POLR2E-208ENST00000591709 GOLIM4O00461 696 aa20.31■□□□□ 0.84
POLR2E-208ENST00000591709 HMMRO75330 724 aa20.31■□□□□ 0.84
POLR2E-208ENST00000591709 MBD4O95243 580 aa20.31■□□□□ 0.84
POLR2E-208ENST00000591709 BEX3Q00994 111 aa20.31■□□□□ 0.84
POLR2E-208ENST00000591709 SLFNL1Q499Z3 407 aa20.31■□□□□ 0.84
POLR2E-208ENST00000591709 SIRT2Q8IXJ6 389 aa20.31■□□□□ 0.84
POLR2E-208ENST00000591709 FGD4Q96M96 766 aa20.31■□□□□ 0.84
POLR2E-208ENST00000591709 ABHD16BQ9H3Z7 469 aa20.31■□□□□ 0.84
POLR2E-208ENST00000591709 KANSL2Q9H9L4 492 aa20.31■□□□□ 0.84
POLR2E-208ENST00000591709 HCN4Q9Y3Q4 1203 aa20.31■□□□□ 0.84
POLR2E-208ENST00000591709 CTAGE5O15320 804 aa20.3■□□□□ 0.84
POLR2E-208ENST00000591709 CCL23P55773 120 aa20.3■□□□□ 0.84
POLR2E-208ENST00000591709 AAK1Q2M2I8 961 aa20.3■□□□□ 0.84
POLR2E-208ENST00000591709 C12orf60Q5U649 245 aa20.3■□□□□ 0.84
POLR2E-208ENST00000591709 C16orf86Q6ZW13 317 aa20.3■□□□□ 0.84
POLR2E-208ENST00000591709 ARMCX2Q7L311 632 aa20.3■□□□□ 0.84
POLR2E-208ENST00000591709 ZNF467Q7Z7K2 595 aaPredicted RBP20.3■□□□□ 0.84
POLR2E-208ENST00000591709 ERC1Q8IUD2 1116 aa20.3■□□□□ 0.84
POLR2E-208ENST00000591709 CPXCR1Q8N123 301 aa20.3■□□□□ 0.84
POLR2E-208ENST00000591709 IL1RAPL2Q9NP60 686 aa20.3■□□□□ 0.84
POLR2E-208ENST00000591709 TRIP12Q14669 1992 aaPredicted RBP20.29■□□□□ 0.84
POLR2E-208ENST00000591709 RRP1P56182 461 aaKnown RBP20.29■□□□□ 0.84
POLR2E-208ENST00000591709 HSP90AB4PQ58FF6 505 aa20.29■□□□□ 0.84
POLR2E-208ENST00000591709 AMOTL1Q8IY63 956 aa20.29■□□□□ 0.84
POLR2E-208ENST00000591709 LRFN3Q9BTN0 628 aa20.29■□□□□ 0.84
POLR2E-208ENST00000591709 EPHX3Q9H6B9 360 aa20.29■□□□□ 0.84
POLR2E-208ENST00000591709 ATP8A2Q9NTI2 1148 aa20.29■□□□□ 0.84
POLR2E-208ENST00000591709 TET1Q8NFU7 2136 aa20.29■□□□□ 0.84
POLR2E-208ENST00000591709 MUC6Q6W4X9 2439 aa20.28■□□□□ 0.84
POLR2E-208ENST00000591709 USP17L12C9JPN9 530 aa20.28■□□□□ 0.84
POLR2E-208ENST00000591709 USP17L21D6R901 530 aa20.28■□□□□ 0.84
POLR2E-208ENST00000591709 CXCL17Q6UXB2 119 aa20.28■□□□□ 0.84
POLR2E-208ENST00000591709 BCL11AQ9H165 835 aa20.28■□□□□ 0.84
POLR2E-208ENST00000591709 WNT8AQ9H1J5 351 aa20.28■□□□□ 0.84
POLR2E-208ENST00000591709 SLC4A7Q9Y6M7 1214 aa20.28■□□□□ 0.84
POLR2E-208ENST00000591709 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.27■□□□□ 0.84
POLR2E-208ENST00000591709 ZBBXA8MT70 800 aa20.27■□□□□ 0.84
POLR2E-208ENST00000591709 CCDC144CPQ8IYA2 1237 aa20.27■□□□□ 0.84
POLR2E-208ENST00000591709 ANKRD35Q8N283 1001 aa20.27■□□□□ 0.84
POLR2E-208ENST00000591709 RHPN1Q8TCX5 695 aa20.27■□□□□ 0.84
POLR2E-208ENST00000591709 NOC4LQ9BVI4 516 aaKnown RBP20.27■□□□□ 0.84
POLR2E-208ENST00000591709 PCDHA11Q9Y5I1 949 aa20.27■□□□□ 0.84
POLR2E-208ENST00000591709 ASTN1O14525 1302 aa20.27■□□□□ 0.83
POLR2E-208ENST00000591709 RFXAPO00287 272 aa20.26■□□□□ 0.83
POLR2E-208ENST00000591709 ERC2O15083 957 aa20.26■□□□□ 0.83
POLR2E-208ENST00000591709 NOL8Q76FK4 1167 aaKnown RBP20.26■□□□□ 0.83
POLR2E-208ENST00000591709 KATNBL1Q9H079 304 aa20.26■□□□□ 0.83
POLR2E-208ENST00000591709 RAVER2Q9HCJ3 691 aaKnown RBP20.26■□□□□ 0.83
POLR2E-208ENST00000591709 CTDP1Q9Y5B0 961 aaPredicted RBP20.26■□□□□ 0.83
POLR2E-208ENST00000591709 B4GALT4O60513 344 aa20.25■□□□□ 0.83
POLR2E-208ENST00000591709 NDUFB10O96000 172 aa20.25■□□□□ 0.83
POLR2E-208ENST00000591709 PTGS1P23219 599 aa20.25■□□□□ 0.83
POLR2E-208ENST00000591709 ADD2P35612 726 aa20.25■□□□□ 0.83
POLR2E-208ENST00000591709 ITGA7Q13683 1181 aa20.25■□□□□ 0.83
POLR2E-208ENST00000591709 TLK2Q86UE8 772 aa20.25■□□□□ 0.83
POLR2E-208ENST00000591709 SLC43A3Q8NBI5 491 aa20.25■□□□□ 0.83
POLR2E-208ENST00000591709 SCLYQ96I15 445 aa20.25■□□□□ 0.83
POLR2E-208ENST00000591709 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.25■□□□□ 0.83
POLR2E-208ENST00000591709 TRPV6Q9H1D0 765 aa20.25■□□□□ 0.83
POLR2E-208ENST00000591709 CERS4Q9HA82 394 aa20.25■□□□□ 0.83
POLR2E-208ENST00000591709 ATP2A1O14983 1001 aa20.24■□□□□ 0.83
POLR2E-208ENST00000591709 CHGBP05060 677 aa20.24■□□□□ 0.83
POLR2E-208ENST00000591709 ATP2A2P16615 1042 aaKnown RBP20.24■□□□□ 0.83
POLR2E-208ENST00000591709 TNFAIP2Q03169 654 aa20.24■□□□□ 0.83
POLR2E-208ENST00000591709 TMEM31Q5JXX7 168 aa20.24■□□□□ 0.83
POLR2E-208ENST00000591709 KRT40Q6A162 431 aa20.24■□□□□ 0.83
POLR2E-208ENST00000591709 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.24■□□□□ 0.83
POLR2E-208ENST00000591709 PRPF38AQ8NAV1 312 aaKnown RBP20.24■□□□□ 0.83
POLR2E-208ENST00000591709 KIFC2Q96AC6 838 aa20.24■□□□□ 0.83
POLR2E-208ENST00000591709 KIF1BPQ96EK5 621 aa20.24■□□□□ 0.83
POLR2E-208ENST00000591709 DDRGK1Q96HY6 314 aa20.24■□□□□ 0.83
POLR2E-208ENST00000591709 HOMER2Q9NSB8 354 aa20.24■□□□□ 0.83
POLR2E-208ENST00000591709 ARIH1Q9Y4X5 557 aaPredicted RBP20.24■□□□□ 0.83
POLR2E-208ENST00000591709 MTCH2Q9Y6C9 303 aa20.24■□□□□ 0.83
POLR2E-208ENST00000591709 GRIN2DO15399 1336 aa20.24■□□□□ 0.83
POLR2E-208ENST00000591709 SCN10AQ9Y5Y9 1956 aa20.23■□□□□ 0.83
POLR2E-208ENST00000591709 F5H6K3 240 aa20.23■□□□□ 0.83
POLR2E-208ENST00000591709 GTPBP6O43824 516 aaPredicted RBP20.23■□□□□ 0.83
POLR2E-208ENST00000591709 ZBED4O75132 1171 aa20.23■□□□□ 0.83
POLR2E-208ENST00000591709 CA3P07451 260 aa20.23■□□□□ 0.83
POLR2E-208ENST00000591709 NKX3-2P78367 333 aa20.23■□□□□ 0.83
POLR2E-208ENST00000591709 CNTN2Q02246 1040 aa20.23■□□□□ 0.83
POLR2E-208ENST00000591709 KLRC3Q07444 240 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms