RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ATP2A1O14983 1001 aa13.49□□□□□ -0.25
VMP1-211ENST00000591315 HMGCRP04035 888 aa13.49□□□□□ -0.25
VMP1-211ENST00000591315 FCER1AP12319 257 aa13.49□□□□□ -0.25
VMP1-211ENST00000591315 ALAS1P13196 640 aa13.49□□□□□ -0.25
VMP1-211ENST00000591315 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
VMP1-211ENST00000591315 ZKSCAN1P17029 563 aaPredicted RBP13.49□□□□□ -0.25
VMP1-211ENST00000591315 CYP2C19P33261 490 aa13.49□□□□□ -0.25
VMP1-211ENST00000591315 CACNB2Q08289 660 aaPredicted RBP13.49□□□□□ -0.25
VMP1-211ENST00000591315 WTAPQ15007 396 aa13.49□□□□□ -0.25
VMP1-211ENST00000591315 MUM1L1Q5H9M0 696 aa13.49□□□□□ -0.25
VMP1-211ENST00000591315 DPP9Q86TI2 863 aa13.49□□□□□ -0.25
VMP1-211ENST00000591315 MYL10Q9BUA6 226 aa13.49□□□□□ -0.25
VMP1-211ENST00000591315 RNF208Q9H0X6 261 aa13.49□□□□□ -0.25
VMP1-211ENST00000591315 RANBP17Q9H2T7 1088 aaKnown RBP13.49□□□□□ -0.25
VMP1-211ENST00000591315 LY9Q9HBG7 655 aa13.49□□□□□ -0.25
VMP1-211ENST00000591315 VAT1LQ9HCJ6 419 aa13.49□□□□□ -0.25
VMP1-211ENST00000591315 DDX49Q9Y6V7 483 aaKnown RBP13.49□□□□□ -0.25
VMP1-211ENST00000591315 MCM3APO60318 1980 aa13.49□□□□□ -0.25
VMP1-211ENST00000591315 ZNF236Q9UL36 1845 aa13.48□□□□□ -0.25
VMP1-211ENST00000591315 SH2B2O14492 632 aaPredicted RBP13.48□□□□□ -0.25
VMP1-211ENST00000591315 STRNO43815 780 aa13.48□□□□□ -0.25
VMP1-211ENST00000591315 IGHA2P01877 340 aa13.48□□□□□ -0.25
VMP1-211ENST00000591315 HOXC6P09630 235 aa13.48□□□□□ -0.25
VMP1-211ENST00000591315 PARP1P09874 1014 aaKnown RBP13.48□□□□□ -0.25
VMP1-211ENST00000591315 CCND3P30281 292 aaPredicted RBP13.48□□□□□ -0.25
VMP1-211ENST00000591315 NT5C2P49902 561 aa13.48□□□□□ -0.25
VMP1-211ENST00000591315 UBXN2AP68543 259 aa13.48□□□□□ -0.25
VMP1-211ENST00000591315 PRAMEF19Q5SWL8 479 aa13.48□□□□□ -0.25
VMP1-211ENST00000591315 MAP3K21Q5TCX8 1036 aa13.48□□□□□ -0.25
VMP1-211ENST00000591315 TRPV1Q8NER1 839 aa13.48□□□□□ -0.25
VMP1-211ENST00000591315 KCNB2Q92953 911 aa13.48□□□□□ -0.25
VMP1-211ENST00000591315 SHISA4Q96DD7 197 aa13.48□□□□□ -0.25
VMP1-211ENST00000591315 PURBQ96QR8 312 aaKnown RBP13.48□□□□□ -0.25
VMP1-211ENST00000591315 TMEM106CQ9BVX2 250 aa13.48□□□□□ -0.25
VMP1-211ENST00000591315 RNF146Q9NTX7 359 aa13.48□□□□□ -0.25
VMP1-211ENST00000591315 MAD2L2Q9UI95 211 aa13.48□□□□□ -0.25
VMP1-211ENST00000591315 CCPG1Q9ULG6 757 aa13.48□□□□□ -0.25
VMP1-211ENST00000591315 SNX14Q9Y5W7 946 aa13.48□□□□□ -0.25
VMP1-211ENST00000591315 RXRAP19793 462 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 MCM5P33992 734 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 HSPA4P34932 840 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 RGS19P49795 217 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 OAZ1P54368 228 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 TROAPQ12815 778 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 GRM4Q14833 912 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 ZNF792Q3KQV3 632 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 ADGRF4Q8IZF3 695 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 ABRAQ8N0Z2 381 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 MAML3Q96JK9 1138 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 FGD4Q96M96 766 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 DEFB118Q96PH6 123 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 TRERF1Q96PN7 1200 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 NEK1Q96PY6 1258 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.47□□□□□ -0.25
VMP1-211ENST00000591315 JMJD4Q9H9V9 463 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 RBBP6Q7Z6E9 1792 aaKnown RBP13.47□□□□□ -0.25
VMP1-211ENST00000591315 MYH6P13533 1939 aa13.47□□□□□ -0.25
VMP1-211ENST00000591315 DNAJC25-GNG10A0A024R161 153 aa13.46□□□□□ -0.25
VMP1-211ENST00000591315 PALM3A6NDB9 673 aaPredicted RBP13.46□□□□□ -0.25
VMP1-211ENST00000591315 ICAM1P05362 532 aa13.46□□□□□ -0.25
VMP1-211ENST00000591315 FDX1P10109 184 aa13.46□□□□□ -0.25
VMP1-211ENST00000591315 EXOSC10Q01780 885 aaKnown RBP13.46□□□□□ -0.25
VMP1-211ENST00000591315 CNTN2Q02246 1040 aa13.46□□□□□ -0.25
VMP1-211ENST00000591315 KCTD2Q14681 263 aa13.46□□□□□ -0.25
VMP1-211ENST00000591315 TSGA10IPQ3SY00 556 aa13.46□□□□□ -0.25
VMP1-211ENST00000591315 ASPRV1Q53RT3 343 aa13.46□□□□□ -0.25
VMP1-211ENST00000591315 GPATCH4Q5T3I0 446 aaKnown RBP13.46□□□□□ -0.25
VMP1-211ENST00000591315 RNF20Q5VTR2 975 aa13.46□□□□□ -0.25
VMP1-211ENST00000591315 NUP133Q8WUM0 1156 aa13.46□□□□□ -0.25
VMP1-211ENST00000591315 USP26Q9BXU7 913 aa13.46□□□□□ -0.25
VMP1-211ENST00000591315 A1CFQ9NQ94 594 aaKnown RBP13.46□□□□□ -0.25
VMP1-211ENST00000591315 PAK6Q9NQU5 681 aaPredicted RBP13.46□□□□□ -0.25
VMP1-211ENST00000591315 LCTP09848 1927 aa13.46□□□□□ -0.25
VMP1-211ENST00000591315 CEP290O15078 2479 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 ERICH2A1L162 156 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 KLRF2D3W0D1 207 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 NFIBO00712 420 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 SEC24BO95487 1268 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 GJB1P08034 283 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 COPB2P35606 906 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 SART3Q15020 963 aaKnown RBP13.45□□□□□ -0.26
VMP1-211ENST00000591315 CDC37Q16543 378 aaPredicted RBP13.45□□□□□ -0.26
VMP1-211ENST00000591315 USH1GQ495M9 461 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 CCDC144CPQ8IYA2 1237 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 ZNF654Q8IZM8 581 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 ANKRD35Q8N283 1001 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 CHST13Q8NET6 341 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 CLEC4DQ8WXI8 215 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 PIBF1Q8WXW3 757 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 TBC1D5Q92609 795 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 DDX11Q96FC9 970 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 JAKMIP1Q96N16 626 aaKnown RBP13.45□□□□□ -0.26
VMP1-211ENST00000591315 ACAD9Q9H845 621 aa13.45□□□□□ -0.26
VMP1-211ENST00000591315 ASTN1O14525 1302 aa13.44□□□□□ -0.26
VMP1-211ENST00000591315 RPTORQ8N122 1335 aa13.44□□□□□ -0.26
VMP1-211ENST00000591315 DNAH12Q6ZR08 3092 aa13.44□□□□□ -0.26
VMP1-211ENST00000591315 SOWAHBA6NEL2 793 aa13.44□□□□□ -0.26
VMP1-211ENST00000591315 CYTH3O43739 400 aa13.44□□□□□ -0.26
VMP1-211ENST00000591315 DHX16O60231 1041 aaKnown RBP13.44□□□□□ -0.26
VMP1-211ENST00000591315 PPP1R11O60927 126 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms