RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 OLFML2BQ68BL8 750 aa10.78□□□□□ -0.68
DNMT1-223ENST00000591239 STOX1Q6ZVD7 989 aa10.78□□□□□ -0.68
DNMT1-223ENST00000591239 RALYLQ86SE5 291 aaKnown RBP10.78□□□□□ -0.68
DNMT1-223ENST00000591239 NCOA7Q8NI08 942 aa10.78□□□□□ -0.68
DNMT1-223ENST00000591239 SHISA4Q96DD7 197 aa10.78□□□□□ -0.68
DNMT1-223ENST00000591239 AGBL1Q96MI9 1066 aa10.78□□□□□ -0.68
DNMT1-223ENST00000591239 ZNF236Q9UL36 1845 aa10.78□□□□□ -0.68
DNMT1-223ENST00000591239 ZNF536O15090 1300 aa10.78□□□□□ -0.68
DNMT1-223ENST00000591239 SLC27A2O14975 620 aa10.77□□□□□ -0.69
DNMT1-223ENST00000591239 IGHA2P01877 340 aa10.77□□□□□ -0.69
DNMT1-223ENST00000591239 TFRCP02786 760 aaKnown RBP10.77□□□□□ -0.69
DNMT1-223ENST00000591239 CYP2C19P33261 490 aa10.77□□□□□ -0.69
DNMT1-223ENST00000591239 NECTIN1Q15223 517 aa10.77□□□□□ -0.69
DNMT1-223ENST00000591239 SEC23AQ15436 765 aa10.77□□□□□ -0.69
DNMT1-223ENST00000591239 GPATCH4Q5T3I0 446 aaKnown RBP10.77□□□□□ -0.69
DNMT1-223ENST00000591239 SYDE2Q5VT97 1194 aa10.77□□□□□ -0.69
DNMT1-223ENST00000591239 CCDC174Q6PII3 467 aa10.77□□□□□ -0.69
DNMT1-223ENST00000591239 CHST13Q8NET6 341 aa10.77□□□□□ -0.69
DNMT1-223ENST00000591239 DDX11Q96FC9 970 aa10.77□□□□□ -0.69
DNMT1-223ENST00000591239 MAML3Q96JK9 1138 aa10.77□□□□□ -0.69
DNMT1-223ENST00000591239 HOMER2Q9NSB8 354 aa10.77□□□□□ -0.69
DNMT1-223ENST00000591239 FBXO40Q9UH90 709 aa10.77□□□□□ -0.69
DNMT1-223ENST00000591239 ZNFX1Q9P2E3 1918 aaKnown RBP10.77□□□□□ -0.69
DNMT1-223ENST00000591239 DNAJC25-GNG10A0A024R161 153 aa10.76□□□□□ -0.69
DNMT1-223ENST00000591239 ERICH2A1L162 156 aa10.76□□□□□ -0.69
DNMT1-223ENST00000591239 IFIT3O14879 490 aaKnown RBP10.76□□□□□ -0.69
DNMT1-223ENST00000591239 ICAM1P05362 532 aa10.76□□□□□ -0.69
DNMT1-223ENST00000591239 GOLGA8HP0CJ92 632 aa10.76□□□□□ -0.69
DNMT1-223ENST00000591239 ALAS1P13196 640 aa10.76□□□□□ -0.69
DNMT1-223ENST00000591239 CAPN2P17655 700 aa10.76□□□□□ -0.69
DNMT1-223ENST00000591239 CCND3P30281 292 aaPredicted RBP10.76□□□□□ -0.69
DNMT1-223ENST00000591239 SART3Q15020 963 aaKnown RBP10.76□□□□□ -0.69
DNMT1-223ENST00000591239 ZNF792Q3KQV3 632 aa10.76□□□□□ -0.69
DNMT1-223ENST00000591239 CREB3L3Q68CJ9 461 aa10.76□□□□□ -0.69
DNMT1-223ENST00000591239 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.76□□□□□ -0.69
DNMT1-223ENST00000591239 CHST3Q7LGC8 479 aa10.76□□□□□ -0.69
DNMT1-223ENST00000591239 ANKRD35Q8N283 1001 aa10.76□□□□□ -0.69
DNMT1-223ENST00000591239 TRERF1Q96PN7 1200 aa10.76□□□□□ -0.69
DNMT1-223ENST00000591239 CRISPLD2Q9H0B8 497 aa10.76□□□□□ -0.69
DNMT1-223ENST00000591239 RANBP17Q9H2T7 1088 aaKnown RBP10.76□□□□□ -0.69
DNMT1-223ENST00000591239 CCPG1Q9ULG6 757 aa10.76□□□□□ -0.69
DNMT1-223ENST00000591239 DIS3Q9Y2L1 958 aaKnown RBP10.76□□□□□ -0.69
DNMT1-223ENST00000591239 PARP1P09874 1014 aaKnown RBP10.75□□□□□ -0.69
DNMT1-223ENST00000591239 CNGA1P29973 690 aa10.75□□□□□ -0.69
DNMT1-223ENST00000591239 ANTXR2P58335 489 aa10.75□□□□□ -0.69
DNMT1-223ENST00000591239 TKFCQ3LXA3 575 aa10.75□□□□□ -0.69
DNMT1-223ENST00000591239 ASPRV1Q53RT3 343 aa10.75□□□□□ -0.69
DNMT1-223ENST00000591239 UBE2Q1Q7Z7E8 422 aa10.75□□□□□ -0.69
DNMT1-223ENST00000591239 MB21D2Q8IYB1 491 aaPredicted RBP10.75□□□□□ -0.69
DNMT1-223ENST00000591239 TRPV1Q8NER1 839 aa10.75□□□□□ -0.69
DNMT1-223ENST00000591239 IGDCC4Q8TDY8 1250 aa10.75□□□□□ -0.69
DNMT1-223ENST00000591239 UBA5Q9GZZ9 404 aa10.75□□□□□ -0.69
DNMT1-223ENST00000591239 CPVLQ9H3G5 476 aa10.75□□□□□ -0.69
DNMT1-223ENST00000591239 ACAD9Q9H845 621 aa10.75□□□□□ -0.69
DNMT1-223ENST00000591239 RNF146Q9NTX7 359 aa10.75□□□□□ -0.69
DNMT1-223ENST00000591239 FARP2O94887 1054 aaPredicted RBP10.74□□□□□ -0.69
DNMT1-223ENST00000591239 CYBAP13498 195 aa10.74□□□□□ -0.69
DNMT1-223ENST00000591239 WTAPQ15007 396 aa10.74□□□□□ -0.69
DNMT1-223ENST00000591239 MUM1L1Q5H9M0 696 aa10.74□□□□□ -0.69
DNMT1-223ENST00000591239 TMEM67Q5HYA8 995 aa10.74□□□□□ -0.69
DNMT1-223ENST00000591239 PRAMEF19Q5SWL8 479 aa10.74□□□□□ -0.69
DNMT1-223ENST00000591239 RNF20Q5VTR2 975 aa10.74□□□□□ -0.69
DNMT1-223ENST00000591239 LHX8Q68G74 356 aa10.74□□□□□ -0.69
DNMT1-223ENST00000591239 ADGRF4Q8IZF3 695 aa10.74□□□□□ -0.69
DNMT1-223ENST00000591239 TINF2Q9BSI4 451 aa10.74□□□□□ -0.69
DNMT1-223ENST00000591239 SENP2Q9HC62 589 aa10.74□□□□□ -0.69
DNMT1-223ENST00000591239 A1CFQ9NQ94 594 aaKnown RBP10.74□□□□□ -0.69
DNMT1-223ENST00000591239 OGDHLQ9ULD0 1010 aa10.74□□□□□ -0.69
DNMT1-223ENST00000591239 PDE4DIPQ5VU43 2346 aa10.74□□□□□ -0.69
DNMT1-223ENST00000591239 PLXNA1Q9UIW2 1896 aa10.73□□□□□ -0.69
DNMT1-223ENST00000591239 PRC1O43663 620 aa10.73□□□□□ -0.69
DNMT1-223ENST00000591239 MSCO60682 206 aa10.73□□□□□ -0.69
DNMT1-223ENST00000591239 TAL1P17542 331 aaPredicted RBP10.73□□□□□ -0.69
DNMT1-223ENST00000591239 MCM5P33992 734 aa10.73□□□□□ -0.69
DNMT1-223ENST00000591239 CNTN2Q02246 1040 aa10.73□□□□□ -0.69
DNMT1-223ENST00000591239 COL9A3Q14050 684 aaPredicted RBP10.73□□□□□ -0.69
DNMT1-223ENST00000591239 ZNF467Q7Z7K2 595 aaPredicted RBP10.73□□□□□ -0.69
DNMT1-223ENST00000591239 STAG2Q8N3U4 1231 aa10.73□□□□□ -0.69
DNMT1-223ENST00000591239 MSL3Q8N5Y2 521 aaKnown RBP10.73□□□□□ -0.69
DNMT1-223ENST00000591239 ANKLE1Q8NAG6 615 aa10.73□□□□□ -0.69
DNMT1-223ENST00000591239 MTA3Q9BTC8 594 aa10.73□□□□□ -0.69
DNMT1-223ENST00000591239 LY9Q9HBG7 655 aa10.73□□□□□ -0.69
DNMT1-223ENST00000591239 DDX20Q9UHI6 824 aaKnown RBP10.73□□□□□ -0.69
DNMT1-223ENST00000591239 MAD2L2Q9UI95 211 aa10.73□□□□□ -0.69
DNMT1-223ENST00000591239 PNMA2Q9UL42 364 aa10.73□□□□□ -0.69
DNMT1-223ENST00000591239 PFASO15067 1338 aa10.73□□□□□ -0.69
DNMT1-223ENST00000591239 SMCHD1A6NHR9 2005 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 PALM3A6NDB9 673 aaPredicted RBP10.72□□□□□ -0.69
DNMT1-223ENST00000591239 KLRF2D3W0D1 207 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 POTEB2H3BUK9 544 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 NFIBO00712 420 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 SEPT4O43236 478 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 TROAPQ12815 778 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 TSGA10IPQ3SY00 556 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 MAMDC4Q6UXC1 1216 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 NSMFQ6X4W1 530 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 CATIPQ7Z7H3 387 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 RASEFQ8IZ41 740 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 FAM133AQ8N9E0 248 aa10.72□□□□□ -0.69
DNMT1-223ENST00000591239 PAWRQ96IZ0 340 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms